RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
TRAPPC6B-205ENST00000555269 ZNF853P0CG23 659 aa16.21■□□□□ 0.19
TRAPPC6B-205ENST00000555269 KCNA3P22001 575 aa16.21■□□□□ 0.19
TRAPPC6B-205ENST00000555269 YY1P25490 414 aa16.21■□□□□ 0.19
TRAPPC6B-205ENST00000555269 PDIA6Q15084 440 aa16.21■□□□□ 0.19
TRAPPC6B-205ENST00000555269 HLFQ16534 295 aa16.21■□□□□ 0.19
TRAPPC6B-205ENST00000555269 TTLL7Q6ZT98 887 aa16.21■□□□□ 0.19
TRAPPC6B-205ENST00000555269 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
TRAPPC6B-205ENST00000555269 ANXA1P04083 346 aa16.2■□□□□ 0.18
TRAPPC6B-205ENST00000555269 CHRNA5P30532 468 aa16.2■□□□□ 0.18
TRAPPC6B-205ENST00000555269 PROSER3Q2NL68 480 aa16.2■□□□□ 0.18
TRAPPC6B-205ENST00000555269 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
TRAPPC6B-205ENST00000555269 ELL2O00472 640 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC6B-205ENST00000555269 C10orf71Q711Q0 1435 aa16.18■□□□□ 0.18
TRAPPC6B-205ENST00000555269 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
TRAPPC6B-205ENST00000555269 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
TRAPPC6B-205ENST00000555269 GNAI1P63096 354 aa16.17■□□□□ 0.18
TRAPPC6B-205ENST00000555269 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
TRAPPC6B-205ENST00000555269 CLEC4GQ6UXB4 293 aa16.17■□□□□ 0.18
TRAPPC6B-205ENST00000555269 LRP10Q7Z4F1 713 aa16.17■□□□□ 0.18
TRAPPC6B-205ENST00000555269 WWC1Q8IX03 1113 aa16.17■□□□□ 0.18
TRAPPC6B-205ENST00000555269 IFT57Q9NWB7 429 aa16.17■□□□□ 0.18
TRAPPC6B-205ENST00000555269 BCS1LQ9Y276 419 aa16.17■□□□□ 0.18
TRAPPC6B-205ENST00000555269 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
TRAPPC6B-205ENST00000555269 FAM177BA6PVY3 158 aa16.16■□□□□ 0.18
TRAPPC6B-205ENST00000555269 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
TRAPPC6B-205ENST00000555269 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
TRAPPC6B-205ENST00000555269 AIMP1Q12904 312 aaKnown RBP16.15■□□□□ 0.18
TRAPPC6B-205ENST00000555269 CCDC27Q2M243 656 aa16.15■□□□□ 0.18
TRAPPC6B-205ENST00000555269 PRR5LQ6MZQ0 368 aa16.15■□□□□ 0.18
TRAPPC6B-205ENST00000555269 C8orf58Q8NAV2 365 aa16.15■□□□□ 0.18
TRAPPC6B-205ENST00000555269 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRAPPC6B-205ENST00000555269 ERVV-1B6SEH8 477 aa16.14■□□□□ 0.17
TRAPPC6B-205ENST00000555269 KIF6Q6ZMV9 814 aa16.14■□□□□ 0.17
TRAPPC6B-205ENST00000555269 COPS6Q7L5N1 327 aa16.14■□□□□ 0.17
TRAPPC6B-205ENST00000555269 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
TRAPPC6B-205ENST00000555269 PIM2Q9P1W9 311 aa16.14■□□□□ 0.17
TRAPPC6B-205ENST00000555269 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
TRAPPC6B-205ENST00000555269 MAP3K15Q6ZN16 1313 aa16.14■□□□□ 0.17
TRAPPC6B-205ENST00000555269 CARMIL3Q8ND23 1372 aa16.13■□□□□ 0.17
TRAPPC6B-205ENST00000555269 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
TRAPPC6B-205ENST00000555269 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC6B-205ENST00000555269 C2CD5Q86YS7 1000 aa16.13■□□□□ 0.17
TRAPPC6B-205ENST00000555269 XAGE3Q8WTP9 111 aa16.13■□□□□ 0.17
TRAPPC6B-205ENST00000555269 CHPF2Q9P2E5 772 aa16.13■□□□□ 0.17
TRAPPC6B-205ENST00000555269 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
TRAPPC6B-205ENST00000555269 NPHP1O15259 732 aa16.12■□□□□ 0.17
TRAPPC6B-205ENST00000555269 GPTP24298 496 aa16.12■□□□□ 0.17
TRAPPC6B-205ENST00000555269 TSPYL6Q8N831 410 aa16.12■□□□□ 0.17
TRAPPC6B-205ENST00000555269 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
TRAPPC6B-205ENST00000555269 BRIP1Q9BX63 1249 aa16.12■□□□□ 0.17
TRAPPC6B-205ENST00000555269 DDX21Q9NR30 783 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRAPPC6B-205ENST00000555269 H0YIN7 160 aa16.11■□□□□ 0.17
TRAPPC6B-205ENST00000555269 DALRD3Q5D0E6 543 aaKnown RBP16.11■□□□□ 0.17
TRAPPC6B-205ENST00000555269 ARHGAP27Q6ZUM4 889 aa16.11■□□□□ 0.17
TRAPPC6B-205ENST00000555269 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC6B-205ENST00000555269 HOXB7P09629 217 aa16.1■□□□□ 0.17
TRAPPC6B-205ENST00000555269 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
TRAPPC6B-205ENST00000555269 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
TRAPPC6B-205ENST00000555269 ZNF34Q8IZ26 560 aa16.1■□□□□ 0.17
TRAPPC6B-205ENST00000555269 RGL2O15211 777 aa16.09■□□□□ 0.17
TRAPPC6B-205ENST00000555269 PDE6BP35913 854 aa16.09■□□□□ 0.17
TRAPPC6B-205ENST00000555269 ST5P78524 1137 aa16.09■□□□□ 0.17
TRAPPC6B-205ENST00000555269 SUSD4Q5VX71 490 aa16.09■□□□□ 0.17
TRAPPC6B-205ENST00000555269 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRAPPC6B-205ENST00000555269 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
TRAPPC6B-205ENST00000555269 DBF4Q9UBU7 674 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC6B-205ENST00000555269 KIF13BQ9NQT8 1826 aa16.09■□□□□ 0.17
TRAPPC6B-205ENST00000555269 AFDNP55196 1824 aaKnown RBP16.08■□□□□ 0.17
TRAPPC6B-205ENST00000555269 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
TRAPPC6B-205ENST00000555269 GTF2E1P29083 439 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC6B-205ENST00000555269 NUTM1Q86Y26 1132 aa16.08■□□□□ 0.16
TRAPPC6B-205ENST00000555269 WDR63Q8IWG1 891 aa16.08■□□□□ 0.16
TRAPPC6B-205ENST00000555269 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.16
TRAPPC6B-205ENST00000555269 ERFEQ4G0M1 354 aa16.07■□□□□ 0.16
TRAPPC6B-205ENST00000555269 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
TRAPPC6B-205ENST00000555269 ZNF784Q8NCA9 323 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC6B-205ENST00000555269 PHAXQ9H814 394 aaKnown RBP16.07■□□□□ 0.16
TRAPPC6B-205ENST00000555269 UBN2Q6ZU65 1347 aa16.07■□□□□ 0.16
TRAPPC6B-205ENST00000555269 LAMB4A4D0S4 1761 aa16.06■□□□□ 0.16
TRAPPC6B-205ENST00000555269 NRXN2Q9P2S2 1712 aa16.06■□□□□ 0.16
TRAPPC6B-205ENST00000555269 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
TRAPPC6B-205ENST00000555269 IL16Q14005 1332 aa16.06■□□□□ 0.16
TRAPPC6B-205ENST00000555269 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
TRAPPC6B-205ENST00000555269 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
TRAPPC6B-205ENST00000555269 SRGNP10124 158 aa16.05■□□□□ 0.16
TRAPPC6B-205ENST00000555269 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
TRAPPC6B-205ENST00000555269 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
TRAPPC6B-205ENST00000555269 MIER1Q8N108 512 aa16.05■□□□□ 0.16
TRAPPC6B-205ENST00000555269 KLRG2A4D1S0 409 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC6B-205ENST00000555269 CCER2I3L3R5 266 aa16.04■□□□□ 0.16
TRAPPC6B-205ENST00000555269 SYNE4Q8N205 404 aa16.04■□□□□ 0.16
TRAPPC6B-205ENST00000555269 PLBD2Q8NHP8 589 aa16.04■□□□□ 0.16
TRAPPC6B-205ENST00000555269 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
TRAPPC6B-205ENST00000555269 FANCIQ9NVI1 1328 aa16.03■□□□□ 0.16
TRAPPC6B-205ENST00000555269 C21orf2O43822 256 aa16.03■□□□□ 0.16
TRAPPC6B-205ENST00000555269 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
TRAPPC6B-205ENST00000555269 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC6B-205ENST00000555269 CCDC30Q5VVM6 783 aa16.03■□□□□ 0.16
TRAPPC6B-205ENST00000555269 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms