RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SIPA1L3O60292 1781 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-212ENST00000555254 TRIM27P14373 513 aa22.36■■□□□ 1.17
PSEN1-212ENST00000555254 ADRA2BP18089 450 aa22.36■■□□□ 1.17
PSEN1-212ENST00000555254 AAMPQ13685 434 aa22.36■■□□□ 1.17
PSEN1-212ENST00000555254 ARXQ96QS3 562 aa22.36■■□□□ 1.17
PSEN1-212ENST00000555254 COG6Q9Y2V7 657 aa22.36■■□□□ 1.17
PSEN1-212ENST00000555254 ZNF330Q9Y3S2 320 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-212ENST00000555254 PTPRCP08575 1304 aa22.35■■□□□ 1.17
PSEN1-212ENST00000555254 TJP1Q07157 1748 aa22.35■■□□□ 1.17
PSEN1-212ENST00000555254 A1BGP04217 495 aa22.35■■□□□ 1.17
PSEN1-212ENST00000555254 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
PSEN1-212ENST00000555254 SGIP1Q9BQI5 828 aa22.35■■□□□ 1.17
PSEN1-212ENST00000555254 CHMP4BQ9H444 224 aaKnown RBP22.35■■□□□ 1.17
PSEN1-212ENST00000555254 TUBGCP6Q96RT7 1819 aa22.35■■□□□ 1.17
PSEN1-212ENST00000555254 KLHL34Q8N239 644 aa22.34■■□□□ 1.17
PSEN1-212ENST00000555254 SRP68Q9UHB9 627 aaKnown RBP22.34■■□□□ 1.17
PSEN1-212ENST00000555254 KDM3BQ7LBC6 1761 aa22.34■■□□□ 1.17
PSEN1-212ENST00000555254 QSER1Q2KHR3 1735 aa22.32■■□□□ 1.16
PSEN1-212ENST00000555254 PIP4K2AP48426 406 aaPredicted RBP22.32■■□□□ 1.16
PSEN1-212ENST00000555254 MVPQ14764 893 aaKnown RBP22.32■■□□□ 1.16
PSEN1-212ENST00000555254 NPM2Q86SE8 214 aaKnown RBP22.32■■□□□ 1.16
PSEN1-212ENST00000555254 DBF4Q9UBU7 674 aaPredicted RBP22.32■■□□□ 1.16
PSEN1-212ENST00000555254 COL5A3P25940 1745 aaPredicted RBP22.31■■□□□ 1.16
PSEN1-212ENST00000555254 UBR2Q8IWV8 1755 aa22.31■■□□□ 1.16
PSEN1-212ENST00000555254 ZPR1O75312 459 aa22.31■■□□□ 1.16
PSEN1-212ENST00000555254 RLBP1P12271 317 aa22.31■■□□□ 1.16
PSEN1-212ENST00000555254 ITPRIPQ8IWB1 547 aa22.31■■□□□ 1.16
PSEN1-212ENST00000555254 DDX19BQ9UMR2 479 aa22.31■■□□□ 1.16
PSEN1-212ENST00000555254 TNNQ9UQP3 1299 aa22.31■■□□□ 1.16
PSEN1-212ENST00000555254 UBR3Q6ZT12 1888 aa22.3■■□□□ 1.16
PSEN1-212ENST00000555254 FHDC1Q9C0D6 1143 aaPredicted RBP22.3■■□□□ 1.16
PSEN1-212ENST00000555254 NLGN1Q8N2Q7 840 aa22.29■■□□□ 1.16
PSEN1-212ENST00000555254 HYPKQ9NX55 129 aa22.29■■□□□ 1.16
PSEN1-212ENST00000555254 COL15A1P39059 1388 aa22.28■■□□□ 1.16
PSEN1-212ENST00000555254 GYS1P13807 737 aa22.28■■□□□ 1.16
PSEN1-212ENST00000555254 EIF5P55010 431 aaKnown RBP22.28■■□□□ 1.16
PSEN1-212ENST00000555254 FLIIQ13045 1269 aa22.28■■□□□ 1.16
PSEN1-212ENST00000555254 FKBP5Q13451 457 aaPredicted RBP22.28■■□□□ 1.16
PSEN1-212ENST00000555254 USPL1Q5W0Q7 1092 aa22.28■■□□□ 1.16
PSEN1-212ENST00000555254 B4GALNT3Q6L9W6 998 aa22.28■■□□□ 1.16
PSEN1-212ENST00000555254 TMEM57Q8N5G2 664 aa22.28■■□□□ 1.16
PSEN1-212ENST00000555254 CHPF2Q9P2E5 772 aa22.28■■□□□ 1.16
PSEN1-212ENST00000555254 USP42Q9H9J4 1324 aaKnown RBP22.28■■□□□ 1.16
PSEN1-212ENST00000555254 MYH14Q7Z406 1995 aaKnown RBP22.27■■□□□ 1.16
PSEN1-212ENST00000555254 A0A087WZG4 1122 aa22.27■■□□□ 1.16
PSEN1-212ENST00000555254 MMP10P09238 476 aa22.27■■□□□ 1.16
PSEN1-212ENST00000555254 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
PSEN1-212ENST00000555254 TBC1D2BQ9UPU7 963 aa22.27■■□□□ 1.16
PSEN1-212ENST00000555254 CICQ96RK0 1608 aaPredicted RBP22.27■■□□□ 1.16
PSEN1-212ENST00000555254 G2E3Q7L622 706 aa22.26■■□□□ 1.15
PSEN1-212ENST00000555254 DDX21Q9NR30 783 aaKnown RBP eCLIP22.26■■□□□ 1.15
PSEN1-212ENST00000555254 NARFQ9UHQ1 456 aa22.26■■□□□ 1.15
PSEN1-212ENST00000555254 ABCC4O15439 1325 aa22.26■■□□□ 1.15
PSEN1-212ENST00000555254 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
PSEN1-212ENST00000555254 NBPF26B4DH59 902 aa22.24■■□□□ 1.15
PSEN1-212ENST00000555254 NBPF10Q6P3W6 841 aaKnown RBP22.24■■□□□ 1.15
PSEN1-212ENST00000555254 NBPF15Q8N660 670 aa22.24■■□□□ 1.15
PSEN1-212ENST00000555254 SYT17Q9BSW7 474 aa22.24■■□□□ 1.15
PSEN1-212ENST00000555254 DDX58O95786 925 aaKnown RBP22.23■■□□□ 1.15
PSEN1-212ENST00000555254 CCT4P50991 539 aaKnown RBP22.23■■□□□ 1.15
PSEN1-212ENST00000555254 ERBB4Q15303 1308 aa22.23■■□□□ 1.15
PSEN1-212ENST00000555254 MYL6BP14649 208 aa22.22■■□□□ 1.15
PSEN1-212ENST00000555254 INTS3Q68E01 1043 aaKnown RBP22.22■■□□□ 1.15
PSEN1-212ENST00000555254 SLC4A10Q6U841 1118 aa22.22■■□□□ 1.15
PSEN1-212ENST00000555254 PARP3Q9Y6F1 533 aa22.22■■□□□ 1.15
PSEN1-212ENST00000555254 DZIP3Q86Y13 1208 aaKnown RBP22.21■■□□□ 1.15
PSEN1-212ENST00000555254 PHAXQ9H814 394 aaKnown RBP22.21■■□□□ 1.15
PSEN1-212ENST00000555254 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
PSEN1-212ENST00000555254 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
PSEN1-212ENST00000555254 F6X3S4 739 aa22.18■■□□□ 1.14
PSEN1-212ENST00000555254 ANXA1P04083 346 aa22.18■■□□□ 1.14
PSEN1-212ENST00000555254 TM4SF1P30408 202 aa22.17■■□□□ 1.14
PSEN1-212ENST00000555254 DDR1Q08345 913 aa22.17■■□□□ 1.14
PSEN1-212ENST00000555254 NFIXQ14938 502 aa22.17■■□□□ 1.14
PSEN1-212ENST00000555254 NLGN2Q8NFZ4 835 aa22.17■■□□□ 1.14
PSEN1-212ENST00000555254 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
PSEN1-212ENST00000555254 CAMTA2O94983 1202 aa22.16■■□□□ 1.14
PSEN1-212ENST00000555254 AIMP1Q12904 312 aaKnown RBP22.16■■□□□ 1.14
PSEN1-212ENST00000555254 PDIA6Q15084 440 aa22.16■■□□□ 1.14
PSEN1-212ENST00000555254 PROSER3Q2NL68 480 aa22.16■■□□□ 1.14
PSEN1-212ENST00000555254 KSR2Q6VAB6 950 aa22.16■■□□□ 1.14
PSEN1-212ENST00000555254 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
PSEN1-212ENST00000555254 CD2APQ9Y5K6 639 aa22.16■■□□□ 1.14
PSEN1-212ENST00000555254 ZBTB7BO15156 539 aaPredicted RBP22.15■■□□□ 1.14
PSEN1-212ENST00000555254 TBC1D9BQ66K14 1250 aa22.15■■□□□ 1.14
PSEN1-212ENST00000555254 RWDD1Q9H446 243 aaPredicted RBP22.15■■□□□ 1.14
PSEN1-212ENST00000555254 ZBTB40Q9NUA8 1239 aa22.15■■□□□ 1.14
PSEN1-212ENST00000555254 C4AP0C0L4 1744 aa22.14■■□□□ 1.14
PSEN1-212ENST00000555254 GOLGB1Q14789 3259 aaKnown RBP22.14■■□□□ 1.14
PSEN1-212ENST00000555254 PI4KAP2A4QPH2 592 aa22.14■■□□□ 1.13
PSEN1-212ENST00000555254 RIC3Q7Z5B4 369 aa22.14■■□□□ 1.13
PSEN1-212ENST00000555254 PI4KAP1Q8N8J0 262 aa22.14■■□□□ 1.13
PSEN1-212ENST00000555254 XAGE3Q8WTP9 111 aa22.14■■□□□ 1.13
PSEN1-212ENST00000555254 COL24A1Q17RW2 1714 aa22.14■■□□□ 1.13
PSEN1-212ENST00000555254 POLRMTO00411 1230 aaKnown RBP22.13■■□□□ 1.13
PSEN1-212ENST00000555254 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
PSEN1-212ENST00000555254 TTLL7Q6ZT98 887 aa22.13■■□□□ 1.13
PSEN1-212ENST00000555254 CENPQQ7L2Z9 268 aaPredicted RBP22.13■■□□□ 1.13
PSEN1-212ENST00000555254 COPS6Q7L5N1 327 aa22.13■■□□□ 1.13
PSEN1-212ENST00000555254 SRCIN1Q9C0H9 1055 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms