RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 C2CD5Q86YS7 1000 aa28.18■■■□□ 2.1
SYNE2-218ENST00000555241 CACNA1SQ13698 1873 aa28.17■■■□□ 2.1
SYNE2-218ENST00000555241 H0YIN7 160 aa28.17■■■□□ 2.1
SYNE2-218ENST00000555241 PDE6BP35913 854 aa28.17■■■□□ 2.1
SYNE2-218ENST00000555241 NPHP1O15259 732 aa28.16■■■□□ 2.1
SYNE2-218ENST00000555241 ARFGEF2Q9Y6D5 1785 aa28.15■■■□□ 2.1
SYNE2-218ENST00000555241 MYL6BP14649 208 aa28.15■■■□□ 2.1
SYNE2-218ENST00000555241 ST5P78524 1137 aa28.15■■■□□ 2.1
SYNE2-218ENST00000555241 NGEFQ8N5V2 710 aa28.15■■■□□ 2.1
SYNE2-218ENST00000555241 NIP7Q9Y221 180 aaKnown RBP eCLIP28.15■■■□□ 2.1
SYNE2-218ENST00000555241 ERVV-1B6SEH8 477 aa28.14■■■□□ 2.1
SYNE2-218ENST00000555241 APAF1O14727 1248 aa28.14■■■□□ 2.1
SYNE2-218ENST00000555241 HLFQ16534 295 aa28.14■■■□□ 2.1
SYNE2-218ENST00000555241 KIF6Q6ZMV9 814 aa28.14■■■□□ 2.1
SYNE2-218ENST00000555241 NBPF5PQ86XG9 351 aaPredicted RBP28.14■■■□□ 2.1
SYNE2-218ENST00000555241 MAP3K15Q6ZN16 1313 aa28.14■■■□□ 2.09
SYNE2-218ENST00000555241 ANP32CO43423 234 aa28.13■■■□□ 2.09
SYNE2-218ENST00000555241 CCDC184Q52MB2 194 aa28.13■■■□□ 2.09
SYNE2-218ENST00000555241 CCDC24Q8N4L8 307 aa28.13■■■□□ 2.09
SYNE2-218ENST00000555241 TTLL6Q8N841 843 aa28.13■■■□□ 2.09
SYNE2-218ENST00000555241 LAS1LQ9Y4W2 734 aaKnown RBP28.13■■■□□ 2.09
SYNE2-218ENST00000555241 EIF2S2P20042 333 aaKnown RBP28.12■■■□□ 2.09
SYNE2-218ENST00000555241 CCDC88AQ3V6T2 1871 aa28.12■■■□□ 2.09
SYNE2-218ENST00000555241 TTLL7Q6ZT98 887 aa28.11■■■□□ 2.09
SYNE2-218ENST00000555241 CFAP44Q96MT7 982 aa28.11■■■□□ 2.09
SYNE2-218ENST00000555241 TPTE2Q6XPS3 522 aa28.1■■■□□ 2.09
SYNE2-218ENST00000555241 ANKRD36CQ5JPF3 1778 aa28.09■■■□□ 2.09
SYNE2-218ENST00000555241 PDIA6Q15084 440 aa28.09■■■□□ 2.09
SYNE2-218ENST00000555241 LRP10Q7Z4F1 713 aa28.09■■■□□ 2.09
SYNE2-218ENST00000555241 CALD1Q05682 793 aaKnown RBP28.08■■■□□ 2.09
SYNE2-218ENST00000555241 ZNF622Q969S3 477 aaKnown RBP eCLIP28.08■■■□□ 2.09
SYNE2-218ENST00000555241 GPBP1L1Q9HC44 474 aaPredicted RBP28.08■■■□□ 2.09
SYNE2-218ENST00000555241 SLX4Q8IY92 1834 aa28.07■■■□□ 2.08
SYNE2-218ENST00000555241 FER1L6Q2WGJ9 1857 aa28.07■■■□□ 2.08
SYNE2-218ENST00000555241 KRT24Q2M2I5 525 aa28.07■■■□□ 2.08
SYNE2-218ENST00000555241 ZBTB3Q9H5J0 574 aa28.07■■■□□ 2.08
SYNE2-218ENST00000555241 HOXB7P09629 217 aa28.06■■■□□ 2.08
SYNE2-218ENST00000555241 ZNF853P0CG23 659 aa28.05■■■□□ 2.08
SYNE2-218ENST00000555241 SRGNP10124 158 aa28.05■■■□□ 2.08
SYNE2-218ENST00000555241 PROSER3Q2NL68 480 aa28.05■■■□□ 2.08
SYNE2-218ENST00000555241 MRS2Q9HD23 443 aa28.05■■■□□ 2.08
SYNE2-218ENST00000555241 C9orf131Q5VYM1 1079 aa28.04■■■□□ 2.08
SYNE2-218ENST00000555241 STYK1Q6J9G0 422 aa28.04■■■□□ 2.08
SYNE2-218ENST00000555241 GIGYF2Q6Y7W6 1299 aaKnown RBP28.04■■■□□ 2.08
SYNE2-218ENST00000555241 MASTLQ96GX5 879 aa28.04■■■□□ 2.08
SYNE2-218ENST00000555241 NYXQ9GZU5 481 aa28.04■■■□□ 2.08
SYNE2-218ENST00000555241 MBIPQ9NS73 344 aa28.04■■■□□ 2.08
SYNE2-218ENST00000555241 IFT57Q9NWB7 429 aa28.04■■■□□ 2.08
SYNE2-218ENST00000555241 IBTKQ9P2D0 1353 aaPredicted RBP28.03■■■□□ 2.08
SYNE2-218ENST00000555241 FAM177BA6PVY3 158 aa28.03■■■□□ 2.08
SYNE2-218ENST00000555241 ANXA1P04083 346 aa28.03■■■□□ 2.08
SYNE2-218ENST00000555241 GNAI1P63096 354 aa28.03■■■□□ 2.08
SYNE2-218ENST00000555241 ZNF526Q8TF50 670 aaPredicted RBP28.03■■■□□ 2.08
SYNE2-218ENST00000555241 NECTIN2Q92692 538 aa28.03■■■□□ 2.08
SYNE2-218ENST00000555241 CNKSR1Q969H4 720 aa28.03■■■□□ 2.08
SYNE2-218ENST00000555241 DDX21Q9NR30 783 aaKnown RBP eCLIP28.03■■■□□ 2.08
SYNE2-218ENST00000555241 TNRC6CQ9HCJ0 1690 aaKnown RBP28.03■■■□□ 2.08
SYNE2-218ENST00000555241 DICER1Q9UPY3 1922 aaKnown RBP28.02■■■□□ 2.08
SYNE2-218ENST00000555241 KLRG2A4D1S0 409 aaPredicted RBP28.02■■■□□ 2.08
SYNE2-218ENST00000555241 GTF2E1P29083 439 aaPredicted RBP28.02■■■□□ 2.08
SYNE2-218ENST00000555241 C1QTNF8P60827 252 aa28.01■■■□□ 2.07
SYNE2-218ENST00000555241 ZNF34Q8IZ26 560 aa28.01■■■□□ 2.07
SYNE2-218ENST00000555241 UBN2Q6ZU65 1347 aa28■■■□□ 2.07
SYNE2-218ENST00000555241 GPTP24298 496 aa28■■■□□ 2.07
SYNE2-218ENST00000555241 HDGFL1Q5TGJ6 251 aa28■■■□□ 2.07
SYNE2-218ENST00000555241 RNF181Q9P0P0 153 aa28■■■□□ 2.07
SYNE2-218ENST00000555241 TIAM2Q8IVF5 1701 aa27.99■■■□□ 2.07
SYNE2-218ENST00000555241 RASSF7Q02833 373 aa27.99■■■□□ 2.07
SYNE2-218ENST00000555241 COPS6Q7L5N1 327 aa27.99■■■□□ 2.07
SYNE2-218ENST00000555241 RIC1Q4ADV7 1423 aa27.99■■■□□ 2.07
SYNE2-218ENST00000555241 NPR1P16066 1061 aa27.98■■■□□ 2.07
SYNE2-218ENST00000555241 DUSP27Q5VZP5 1158 aa27.98■■■□□ 2.07
SYNE2-218ENST00000555241 CHPF2Q9P2E5 772 aa27.98■■■□□ 2.07
SYNE2-218ENST00000555241 C21orf2O43822 256 aa27.97■■■□□ 2.07
SYNE2-218ENST00000555241 CCDC27Q2M243 656 aa27.97■■■□□ 2.07
SYNE2-218ENST00000555241 PARP10Q53GL7 1025 aa27.97■■■□□ 2.07
SYNE2-218ENST00000555241 PRPF40BQ6NWY9 871 aaKnown RBP27.97■■■□□ 2.07
SYNE2-218ENST00000555241 XAGE3Q8WTP9 111 aa27.97■■■□□ 2.07
SYNE2-218ENST00000555241 ABCC12Q96J65 1359 aa27.97■■■□□ 2.07
SYNE2-218ENST00000555241 NFKBIEO00221 500 aa27.96■■■□□ 2.07
SYNE2-218ENST00000555241 LMNB1P20700 586 aa27.96■■■□□ 2.07
SYNE2-218ENST00000555241 SUSD4Q5VX71 490 aa27.96■■■□□ 2.07
SYNE2-218ENST00000555241 NUTM1Q86Y26 1132 aa27.96■■■□□ 2.07
SYNE2-218ENST00000555241 DBF4Q9UBU7 674 aaPredicted RBP27.96■■■□□ 2.07
SYNE2-218ENST00000555241 ZC3H4Q9UPT8 1303 aaKnown RBP27.95■■■□□ 2.07
SYNE2-218ENST00000555241 AIMP1Q12904 312 aaKnown RBP27.95■■■□□ 2.06
SYNE2-218ENST00000555241 NCBP3Q53F19 620 aaKnown RBP27.95■■■□□ 2.06
SYNE2-218ENST00000555241 HSP90AB3PQ58FF7 597 aa27.95■■■□□ 2.06
SYNE2-218ENST00000555241 PPP1R42Q7Z4L9 355 aa27.95■■■□□ 2.06
SYNE2-218ENST00000555241 NTSR2O95665 410 aa27.94■■■□□ 2.06
SYNE2-218ENST00000555241 ERFEQ4G0M1 354 aa27.94■■■□□ 2.06
SYNE2-218ENST00000555241 SOGA3Q5TF21 947 aa27.94■■■□□ 2.06
SYNE2-218ENST00000555241 ZNF219Q9P2Y4 722 aaPredicted RBP27.94■■■□□ 2.06
SYNE2-218ENST00000555241 PRELPP51888 382 aa27.92■■■□□ 2.06
SYNE2-218ENST00000555241 CRY2Q49AN0 593 aa27.92■■■□□ 2.06
SYNE2-218ENST00000555241 LTBP3Q9NS15 1303 aa27.92■■■□□ 2.06
SYNE2-218ENST00000555241 LAMB2P55268 1798 aa27.91■■■□□ 2.06
SYNE2-218ENST00000555241 WWC1Q8IX03 1113 aa27.91■■■□□ 2.06
SYNE2-218ENST00000555241 HYPKQ9NX55 129 aa27.91■■■□□ 2.06
SYNE2-218ENST00000555241 RNF123Q5XPI4 1314 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms