RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 ZNF622Q969S3 477 aaKnown RBP eCLIP29.23■■■□□ 2.27
COCH-208ENST00000555117 ST5P78524 1137 aa29.22■■■□□ 2.27
COCH-208ENST00000555117 NMRK2Q9NPI5 230 aa29.22■■■□□ 2.27
COCH-208ENST00000555117 ARFGEF2Q9Y6D5 1785 aa29.21■■■□□ 2.27
COCH-208ENST00000555117 TIAM2Q8IVF5 1701 aa29.21■■■□□ 2.27
COCH-208ENST00000555117 EIF4A1P60842 406 aaKnown RBP29.21■■■□□ 2.27
COCH-208ENST00000555117 TNRC6CQ9HCJ0 1690 aaKnown RBP29.19■■■□□ 2.26
COCH-208ENST00000555117 CCDC184Q52MB2 194 aa29.19■■■□□ 2.26
COCH-208ENST00000555117 RGL2O15211 777 aa29.18■■■□□ 2.26
COCH-208ENST00000555117 NBPF5PQ86XG9 351 aaPredicted RBP29.18■■■□□ 2.26
COCH-208ENST00000555117 FER1L6Q2WGJ9 1857 aa29.18■■■□□ 2.26
COCH-208ENST00000555117 NUP98P52948 1817 aa29.17■■■□□ 2.26
COCH-208ENST00000555117 HSPA6P17066 643 aa29.17■■■□□ 2.26
COCH-208ENST00000555117 RIPK4P57078 832 aa29.17■■■□□ 2.26
COCH-208ENST00000555117 SLX4Q8IY92 1834 aa29.17■■■□□ 2.26
COCH-208ENST00000555117 KDM2BQ8NHM5 1336 aa29.17■■■□□ 2.26
COCH-208ENST00000555117 LMNB1P20700 586 aa29.16■■■□□ 2.26
COCH-208ENST00000555117 PRELPP51888 382 aa29.16■■■□□ 2.26
COCH-208ENST00000555117 NIP7Q9Y221 180 aaKnown RBP eCLIP29.16■■■□□ 2.26
COCH-208ENST00000555117 NFKBIEO00221 500 aa29.15■■■□□ 2.26
COCH-208ENST00000555117 TOMM70O94826 608 aa29.15■■■□□ 2.26
COCH-208ENST00000555117 NGEFQ8N5V2 710 aa29.15■■■□□ 2.26
COCH-208ENST00000555117 CEP350Q5VT06 3117 aa29.14■■■□□ 2.26
COCH-208ENST00000555117 C21orf2O43822 256 aa29.14■■■□□ 2.26
COCH-208ENST00000555117 SRGNP10124 158 aa29.14■■■□□ 2.26
COCH-208ENST00000555117 HLFQ16534 295 aa29.14■■■□□ 2.26
COCH-208ENST00000555117 ZNF219Q9P2Y4 722 aaPredicted RBP29.14■■■□□ 2.26
COCH-208ENST00000555117 TSPYL4Q9UJ04 414 aa29.14■■■□□ 2.26
COCH-208ENST00000555117 ZC3H4Q9UPT8 1303 aaKnown RBP29.14■■■□□ 2.25
COCH-208ENST00000555117 TMPOP42166 694 aaKnown RBP29.13■■■□□ 2.25
COCH-208ENST00000555117 STYK1Q6J9G0 422 aa29.13■■■□□ 2.25
COCH-208ENST00000555117 CNKSR1Q969H4 720 aa29.13■■■□□ 2.25
COCH-208ENST00000555117 RRP7AQ9Y3A4 280 aaKnown RBP29.13■■■□□ 2.25
COCH-208ENST00000555117 DICER1Q9UPY3 1922 aaKnown RBP29.13■■■□□ 2.25
COCH-208ENST00000555117 LMOD3Q0VAK6 560 aa29.12■■■□□ 2.25
COCH-208ENST00000555117 MASTLQ96GX5 879 aa29.12■■■□□ 2.25
COCH-208ENST00000555117 FAM177BA6PVY3 158 aa29.11■■■□□ 2.25
COCH-208ENST00000555117 MYL6BP14649 208 aa29.11■■■□□ 2.25
COCH-208ENST00000555117 TPTE2Q6XPS3 522 aa29.11■■■□□ 2.25
COCH-208ENST00000555117 CCDC146Q8IYE0 955 aa29.11■■■□□ 2.25
COCH-208ENST00000555117 PRPF40BQ6NWY9 871 aaKnown RBP29.1■■■□□ 2.25
COCH-208ENST00000555117 ADAMTS8Q9UP79 889 aa29.1■■■□□ 2.25
COCH-208ENST00000555117 WDR43Q15061 677 aaKnown RBP eCLIP29.09■■■□□ 2.25
COCH-208ENST00000555117 KIF6Q6ZMV9 814 aa29.09■■■□□ 2.25
COCH-208ENST00000555117 C16orf71Q8IYS4 520 aaPredicted RBP29.09■■■□□ 2.25
COCH-208ENST00000555117 MAP3K15Q6ZN16 1313 aa29.09■■■□□ 2.25
COCH-208ENST00000555117 ERVV-1B6SEH8 477 aa29.08■■■□□ 2.25
COCH-208ENST00000555117 TTLL7Q6ZT98 887 aa29.08■■■□□ 2.25
COCH-208ENST00000555117 RRAGCQ9HB90 399 aa29.08■■■□□ 2.25
COCH-208ENST00000555117 ERBB4Q15303 1308 aa29.07■■■□□ 2.24
COCH-208ENST00000555117 NEUROD2Q15784 382 aa29.07■■■□□ 2.24
COCH-208ENST00000555117 BABAM1Q9NWV8 329 aa29.07■■■□□ 2.24
COCH-208ENST00000555117 RBM46Q8TBY0 533 aaKnown RBP29.06■■■□□ 2.24
COCH-208ENST00000555117 RUNDC1Q96C34 613 aa29.05■■■□□ 2.24
COCH-208ENST00000555117 KLRG2A4D1S0 409 aaPredicted RBP29.04■■■□□ 2.24
COCH-208ENST00000555117 GLTPD2A6NH11 291 aa29.04■■■□□ 2.24
COCH-208ENST00000555117 NPR1P16066 1061 aa29.04■■■□□ 2.24
COCH-208ENST00000555117 GTF2E1P29083 439 aaPredicted RBP29.04■■■□□ 2.24
COCH-208ENST00000555117 TAOK3Q9H2K8 898 aa29.04■■■□□ 2.24
COCH-208ENST00000555117 ZBTB3Q9H5J0 574 aa29.04■■■□□ 2.24
COCH-208ENST00000555117 LTBP3Q9NS15 1303 aa29.03■■■□□ 2.24
COCH-208ENST00000555117 EIF2S2P20042 333 aaKnown RBP29.03■■■□□ 2.24
COCH-208ENST00000555117 SOGA3Q5TF21 947 aa29.03■■■□□ 2.24
COCH-208ENST00000555117 MRS2Q9HD23 443 aa29.03■■■□□ 2.24
COCH-208ENST00000555117 NYXQ9GZU5 481 aa29.02■■■□□ 2.24
COCH-208ENST00000555117 ABCC12Q96J65 1359 aa29.01■■■□□ 2.24
COCH-208ENST00000555117 ERFEQ4G0M1 354 aa29.01■■■□□ 2.23
COCH-208ENST00000555117 GPTP24298 496 aa29■■■□□ 2.23
COCH-208ENST00000555117 NUTM1Q86Y26 1132 aa29■■■□□ 2.23
COCH-208ENST00000555117 WDR90Q96KV7 1748 aa29■■■□□ 2.23
COCH-208ENST00000555117 UBN2Q6ZU65 1347 aa28.99■■■□□ 2.23
COCH-208ENST00000555117 APLP1P51693 650 aa28.99■■■□□ 2.23
COCH-208ENST00000555117 PDIA6Q15084 440 aa28.99■■■□□ 2.23
COCH-208ENST00000555117 C7orf43Q8WVR3 580 aa28.99■■■□□ 2.23
COCH-208ENST00000555117 TRIM35Q9UPQ4 493 aa28.99■■■□□ 2.23
COCH-208ENST00000555117 IBTKQ9P2D0 1353 aaPredicted RBP28.99■■■□□ 2.23
COCH-208ENST00000555117 ANKRD36CQ5JPF3 1778 aa28.98■■■□□ 2.23
COCH-208ENST00000555117 CCDC93Q567U6 631 aa28.98■■■□□ 2.23
COCH-208ENST00000555117 GIGYF2Q6Y7W6 1299 aaKnown RBP28.98■■■□□ 2.23
COCH-208ENST00000555117 LRP10Q7Z4F1 713 aa28.98■■■□□ 2.23
COCH-208ENST00000555117 FSTL1Q12841 308 aa28.97■■■□□ 2.23
COCH-208ENST00000555117 ANXA1P04083 346 aa28.96■■■□□ 2.23
COCH-208ENST00000555117 VEGFAP15692 232 aaPredicted RBP28.96■■■□□ 2.23
COCH-208ENST00000555117 PROSER3Q2NL68 480 aa28.96■■■□□ 2.23
COCH-208ENST00000555117 SUSD4Q5VX71 490 aa28.96■■■□□ 2.23
COCH-208ENST00000555117 DPY19L2Q6NUT2 758 aa28.96■■■□□ 2.23
COCH-208ENST00000555117 ZNF34Q8IZ26 560 aa28.96■■■□□ 2.23
COCH-208ENST00000555117 LAS1LQ9Y4W2 734 aaKnown RBP28.96■■■□□ 2.23
COCH-208ENST00000555117 RIC1Q4ADV7 1423 aa28.95■■■□□ 2.23
COCH-208ENST00000555117 CHL1O00533 1208 aa28.95■■■□□ 2.22
COCH-208ENST00000555117 ALDH1B1P30837 517 aa28.95■■■□□ 2.22
COCH-208ENST00000555117 DIEXFQ68CQ4 756 aaKnown RBP28.95■■■□□ 2.22
COCH-208ENST00000555117 NECTIN2Q92692 538 aa28.95■■■□□ 2.22
COCH-208ENST00000555117 KRT24Q2M2I5 525 aa28.93■■■□□ 2.22
COCH-208ENST00000555117 CRY2Q49AN0 593 aa28.93■■■□□ 2.22
COCH-208ENST00000555117 NTSR2O95665 410 aa28.92■■■□□ 2.22
COCH-208ENST00000555117 OLFM4Q6UX06 510 aa28.92■■■□□ 2.22
COCH-208ENST00000555117 SMC1BQ8NDV3 1235 aa28.92■■■□□ 2.22
COCH-208ENST00000555117 FKBP4Q02790 459 aaKnown RBP eCLIP28.91■■■□□ 2.22
COCH-208ENST00000555117 PARP10Q53GL7 1025 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms