RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ERVV-1B6SEH8 477 aa11.42□□□□□ -0.58
ACTN1-213ENST00000554508 NPHP1O15259 732 aa11.42□□□□□ -0.58
ACTN1-213ENST00000554508 ST5P78524 1137 aa11.42□□□□□ -0.58
ACTN1-213ENST00000554508 TTLL6Q8N841 843 aa11.42□□□□□ -0.58
ACTN1-213ENST00000554508 CNBD1Q8NA66 436 aa11.42□□□□□ -0.58
ACTN1-213ENST00000554508 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
ACTN1-213ENST00000554508 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
ACTN1-213ENST00000554508 GPBP1L1Q9HC44 474 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-213ENST00000554508 NIP7Q9Y221 180 aaKnown RBP eCLIP11.41□□□□□ -0.58
ACTN1-213ENST00000554508 CHL1O00533 1208 aa11.4□□□□□ -0.58
ACTN1-213ENST00000554508 MYL6BP14649 208 aa11.4□□□□□ -0.58
ACTN1-213ENST00000554508 KIF6Q6ZMV9 814 aa11.4□□□□□ -0.58
ACTN1-213ENST00000554508 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-213ENST00000554508 NGEFQ8N5V2 710 aa11.4□□□□□ -0.58
ACTN1-213ENST00000554508 MAP3K15Q6ZN16 1313 aa11.39□□□□□ -0.59
ACTN1-213ENST00000554508 EIF2S2P20042 333 aaKnown RBP11.39□□□□□ -0.59
ACTN1-213ENST00000554508 C1QTNF8P60827 252 aa11.39□□□□□ -0.59
ACTN1-213ENST00000554508 CACNA1SQ13698 1873 aa11.39□□□□□ -0.59
ACTN1-213ENST00000554508 HLFQ16534 295 aa11.39□□□□□ -0.59
ACTN1-213ENST00000554508 ZNF622Q969S3 477 aaKnown RBP eCLIP11.39□□□□□ -0.59
ACTN1-213ENST00000554508 ARFGEF2Q9Y6D5 1785 aa11.39□□□□□ -0.59
ACTN1-213ENST00000554508 COL11A2P13942 1736 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-213ENST00000554508 APAF1O14727 1248 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
ACTN1-213ENST00000554508 C9orf131Q5VYM1 1079 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 STYK1Q6J9G0 422 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 TTLL7Q6ZT98 887 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 CCDC24Q8N4L8 307 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 CNKSR1Q969H4 720 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 CFAP44Q96MT7 982 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 NYXQ9GZU5 481 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 LAS1LQ9Y4W2 734 aaKnown RBP11.38□□□□□ -0.59
ACTN1-213ENST00000554508 FER1L6Q2WGJ9 1857 aa11.38□□□□□ -0.59
ACTN1-213ENST00000554508 DICER1Q9UPY3 1922 aaKnown RBP11.37□□□□□ -0.59
ACTN1-213ENST00000554508 KLRG2A4D1S0 409 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-213ENST00000554508 ANP32CO43423 234 aa11.37□□□□□ -0.59
ACTN1-213ENST00000554508 SRGNP10124 158 aa11.37□□□□□ -0.59
ACTN1-213ENST00000554508 GTF2E1P29083 439 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-213ENST00000554508 PDIA6Q15084 440 aa11.37□□□□□ -0.59
ACTN1-213ENST00000554508 GIGYF2Q6Y7W6 1299 aaKnown RBP11.37□□□□□ -0.59
ACTN1-213ENST00000554508 MASTLQ96GX5 879 aa11.37□□□□□ -0.59
ACTN1-213ENST00000554508 SLX4Q8IY92 1834 aa11.37□□□□□ -0.59
ACTN1-213ENST00000554508 HOXB7P09629 217 aa11.36□□□□□ -0.59
ACTN1-213ENST00000554508 GNAI1P63096 354 aa11.36□□□□□ -0.59
ACTN1-213ENST00000554508 LRP10Q7Z4F1 713 aa11.36□□□□□ -0.59
ACTN1-213ENST00000554508 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-213ENST00000554508 ZBTB3Q9H5J0 574 aa11.36□□□□□ -0.59
ACTN1-213ENST00000554508 DDX21Q9NR30 783 aaKnown RBP eCLIP11.36□□□□□ -0.59
ACTN1-213ENST00000554508 RNF181Q9P0P0 153 aa11.36□□□□□ -0.59
ACTN1-213ENST00000554508 ZC3H4Q9UPT8 1303 aaKnown RBP11.35□□□□□ -0.59
ACTN1-213ENST00000554508 FAM177BA6PVY3 158 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 ZNF853P0CG23 659 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 NPR1P16066 1061 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 LMNB1P20700 586 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 PARP10Q53GL7 1025 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 SOGA3Q5TF21 947 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 ZNF34Q8IZ26 560 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 IFT57Q9NWB7 429 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 IBTKQ9P2D0 1353 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-213ENST00000554508 ANKRD36CQ5JPF3 1778 aa11.35□□□□□ -0.59
ACTN1-213ENST00000554508 C21orf2O43822 256 aa11.34□□□□□ -0.59
ACTN1-213ENST00000554508 ALDH1B1P30837 517 aa11.34□□□□□ -0.59
ACTN1-213ENST00000554508 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
ACTN1-213ENST00000554508 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
ACTN1-213ENST00000554508 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
ACTN1-213ENST00000554508 PPP1R42Q7Z4L9 355 aa11.34□□□□□ -0.59
ACTN1-213ENST00000554508 NFKBIEO00221 500 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 ANXA1P04083 346 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 GPTP24298 496 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 RASSF7Q02833 373 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 CCDC27Q2M243 656 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 KRT24Q2M2I5 525 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 PROSER3Q2NL68 480 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 HDGFL1Q5TGJ6 251 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 PRPF40BQ6NWY9 871 aaKnown RBP11.33□□□□□ -0.6
ACTN1-213ENST00000554508 COPS6Q7L5N1 327 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 NECTIN2Q92692 538 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 MBIPQ9NS73 344 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 ZNF219Q9P2Y4 722 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-213ENST00000554508 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 KDM2BQ8NHM5 1336 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 LTBP3Q9NS15 1303 aa11.33□□□□□ -0.6
ACTN1-213ENST00000554508 KIF3CO14782 793 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
ACTN1-213ENST00000554508 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 SUSD4Q5VX71 490 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 DUSP27Q5VZP5 1158 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 XAGE3Q8WTP9 111 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 HYPKQ9NX55 129 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-213ENST00000554508 UBN2Q6ZU65 1347 aa11.32□□□□□ -0.6
ACTN1-213ENST00000554508 NTSR2O95665 410 aa11.31□□□□□ -0.6
ACTN1-213ENST00000554508 TCIRG1Q13488 830 aa11.31□□□□□ -0.6
ACTN1-213ENST00000554508 CRY2Q49AN0 593 aa11.31□□□□□ -0.6
ACTN1-213ENST00000554508 SLC10A5Q5PT55 438 aa11.31□□□□□ -0.6
ACTN1-213ENST00000554508 C7orf43Q8WVR3 580 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms