RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 ZNF219Q9P2Y4 722 aaPredicted RBP18.15■□□□□ 0.5
RIPK3-202ENST00000554338 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
RIPK3-202ENST00000554338 ARFGEF2Q9Y6D5 1785 aa18.14■□□□□ 0.5
RIPK3-202ENST00000554338 C21orf2O43822 256 aa18.14■□□□□ 0.49
RIPK3-202ENST00000554338 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
RIPK3-202ENST00000554338 RBM46Q8TBY0 533 aaKnown RBP18.14■□□□□ 0.49
RIPK3-202ENST00000554338 RRAGCQ9HB90 399 aa18.14■□□□□ 0.49
RIPK3-202ENST00000554338 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
RIPK3-202ENST00000554338 SLX4Q8IY92 1834 aa18.14■□□□□ 0.49
RIPK3-202ENST00000554338 CACNA1SQ13698 1873 aa18.14■□□□□ 0.49
RIPK3-202ENST00000554338 FER1L6Q2WGJ9 1857 aa18.14■□□□□ 0.49
RIPK3-202ENST00000554338 SRGNP10124 158 aa18.13■□□□□ 0.49
RIPK3-202ENST00000554338 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
RIPK3-202ENST00000554338 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
RIPK3-202ENST00000554338 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
RIPK3-202ENST00000554338 RGL2O15211 777 aa18.12■□□□□ 0.49
RIPK3-202ENST00000554338 APLP1P51693 650 aa18.12■□□□□ 0.49
RIPK3-202ENST00000554338 HLFQ16534 295 aa18.12■□□□□ 0.49
RIPK3-202ENST00000554338 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
RIPK3-202ENST00000554338 PRPF40BQ6NWY9 871 aaKnown RBP18.12■□□□□ 0.49
RIPK3-202ENST00000554338 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
RIPK3-202ENST00000554338 NIP7Q9Y221 180 aaKnown RBP eCLIP18.12■□□□□ 0.49
RIPK3-202ENST00000554338 RALBP1Q15311 655 aa18.11■□□□□ 0.49
RIPK3-202ENST00000554338 CNKSR1Q969H4 720 aa18.11■□□□□ 0.49
RIPK3-202ENST00000554338 MASTLQ96GX5 879 aa18.11■□□□□ 0.49
RIPK3-202ENST00000554338 WDR90Q96KV7 1748 aa18.1■□□□□ 0.49
RIPK3-202ENST00000554338 GLTPD2A6NH11 291 aa18.1■□□□□ 0.49
RIPK3-202ENST00000554338 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
RIPK3-202ENST00000554338 FAM177BA6PVY3 158 aa18.09■□□□□ 0.49
RIPK3-202ENST00000554338 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
RIPK3-202ENST00000554338 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
RIPK3-202ENST00000554338 PNNQ9H307 717 aaKnown RBP18.09■□□□□ 0.49
RIPK3-202ENST00000554338 DICER1Q9UPY3 1922 aaKnown RBP18.09■□□□□ 0.49
RIPK3-202ENST00000554338 ABCC12Q96J65 1359 aa18.08■□□□□ 0.49
RIPK3-202ENST00000554338 KLRG2A4D1S0 409 aaPredicted RBP18.08■□□□□ 0.48
RIPK3-202ENST00000554338 FSTL1Q12841 308 aa18.08■□□□□ 0.48
RIPK3-202ENST00000554338 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.48
RIPK3-202ENST00000554338 NGEFQ8N5V2 710 aa18.08■□□□□ 0.48
RIPK3-202ENST00000554338 MAP3K15Q6ZN16 1313 aa18.07■□□□□ 0.48
RIPK3-202ENST00000554338 TPTE2Q6XPS3 522 aa18.07■□□□□ 0.48
RIPK3-202ENST00000554338 RRP7AQ9Y3A4 280 aaKnown RBP18.07■□□□□ 0.48
RIPK3-202ENST00000554338 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
RIPK3-202ENST00000554338 MYL6BP14649 208 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 NPR1P16066 1061 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 RIPK4P57078 832 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 HTRA3P83110 453 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 DNAJC5GQ8N7S2 189 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 C7orf43Q8WVR3 580 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 TSPYL4Q9UJ04 414 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 NUP98P52948 1817 aa18.06■□□□□ 0.48
RIPK3-202ENST00000554338 UBN2Q6ZU65 1347 aa18.05■□□□□ 0.48
RIPK3-202ENST00000554338 ERVV-1B6SEH8 477 aa18.05■□□□□ 0.48
RIPK3-202ENST00000554338 TMPOP42166 694 aaKnown RBP18.05■□□□□ 0.48
RIPK3-202ENST00000554338 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
RIPK3-202ENST00000554338 KIF6Q6ZMV9 814 aa18.05■□□□□ 0.48
RIPK3-202ENST00000554338 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
RIPK3-202ENST00000554338 POTECB2RU33 542 aa18.04■□□□□ 0.48
RIPK3-202ENST00000554338 VEGFAP15692 232 aaPredicted RBP18.04■□□□□ 0.48
RIPK3-202ENST00000554338 CCDC93Q567U6 631 aa18.04■□□□□ 0.48
RIPK3-202ENST00000554338 OLFM4Q6UX06 510 aa18.04■□□□□ 0.48
RIPK3-202ENST00000554338 NUTM1Q86Y26 1132 aa18.04■□□□□ 0.48
RIPK3-202ENST00000554338 SMC1BQ8NDV3 1235 aa18.04■□□□□ 0.48
RIPK3-202ENST00000554338 ZBTB3Q9H5J0 574 aa18.04■□□□□ 0.48
RIPK3-202ENST00000554338 IBTKQ9P2D0 1353 aaPredicted RBP18.04■□□□□ 0.48
RIPK3-202ENST00000554338 GPTP24298 496 aa18.03■□□□□ 0.48
RIPK3-202ENST00000554338 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
RIPK3-202ENST00000554338 CCDC146Q8IYE0 955 aa18.03■□□□□ 0.48
RIPK3-202ENST00000554338 RIC1Q4ADV7 1423 aa18.02■□□□□ 0.48
RIPK3-202ENST00000554338 SNED1Q8TER0 1413 aa18.02■□□□□ 0.48
RIPK3-202ENST00000554338 GTF2E1P29083 439 aaPredicted RBP18.01■□□□□ 0.47
RIPK3-202ENST00000554338 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
RIPK3-202ENST00000554338 PDIA6Q15084 440 aa18.01■□□□□ 0.47
RIPK3-202ENST00000554338 PROSER3Q2NL68 480 aa18.01■□□□□ 0.47
RIPK3-202ENST00000554338 CRY2Q49AN0 593 aa18.01■□□□□ 0.47
RIPK3-202ENST00000554338 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
RIPK3-202ENST00000554338 ANXA1P04083 346 aa18■□□□□ 0.47
RIPK3-202ENST00000554338 DPY19L2Q6NUT2 758 aa18■□□□□ 0.47
RIPK3-202ENST00000554338 BABAM1Q9NWV8 329 aa18■□□□□ 0.47
RIPK3-202ENST00000554338 DDNO94850 711 aaPredicted RBP17.99■□□□□ 0.47
RIPK3-202ENST00000554338 NTSR2O95665 410 aa17.99■□□□□ 0.47
RIPK3-202ENST00000554338 EIF2S2P20042 333 aaKnown RBP17.99■□□□□ 0.47
RIPK3-202ENST00000554338 FKBP4Q02790 459 aaKnown RBP eCLIP17.99■□□□□ 0.47
RIPK3-202ENST00000554338 SUSD4Q5VX71 490 aa17.99■□□□□ 0.47
RIPK3-202ENST00000554338 GIGYF2Q6Y7W6 1299 aaKnown RBP17.99■□□□□ 0.47
RIPK3-202ENST00000554338 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
RIPK3-202ENST00000554338 ZNF277Q9NRM2 450 aaPredicted RBP17.99■□□□□ 0.47
RIPK3-202ENST00000554338 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
RIPK3-202ENST00000554338 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
RIPK3-202ENST00000554338 KLRG1Q96E93 195 aa17.98■□□□□ 0.47
RIPK3-202ENST00000554338 TRIM35Q9UPQ4 493 aa17.98■□□□□ 0.47
RIPK3-202ENST00000554338 PCNTO95613 3336 aa17.98■□□□□ 0.47
RIPK3-202ENST00000554338 ALDH1B1P30837 517 aa17.97■□□□□ 0.47
RIPK3-202ENST00000554338 KRT24Q2M2I5 525 aa17.97■□□□□ 0.47
RIPK3-202ENST00000554338 C3orf67Q6ZVT6 689 aa17.97■□□□□ 0.47
RIPK3-202ENST00000554338 RUNDC1Q96C34 613 aa17.97■□□□□ 0.47
RIPK3-202ENST00000554338 ZNF541Q9H0D2 1346 aa17.97■□□□□ 0.47
RIPK3-202ENST00000554338 WDR43Q15061 677 aaKnown RBP eCLIP17.96■□□□□ 0.47
RIPK3-202ENST00000554338 RTKN2Q8IZC4 609 aa17.96■□□□□ 0.47
RIPK3-202ENST00000554338 NECTIN2Q92692 538 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms