RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 TSPYL6Q8N831 410 aa14.48□□□□□ -0.09
IFT43-206ENST00000554026 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
IFT43-206ENST00000554026 SRP68Q9UHB9 627 aaKnown RBP14.48□□□□□ -0.09
IFT43-206ENST00000554026 PARP3Q9Y6F1 533 aa14.48□□□□□ -0.09
IFT43-206ENST00000554026 MAP3K15Q6ZN16 1313 aa14.47□□□□□ -0.09
IFT43-206ENST00000554026 SCN7AQ01118 1682 aa14.47□□□□□ -0.09
IFT43-206ENST00000554026 VAMP4O75379 141 aa14.47□□□□□ -0.09
IFT43-206ENST00000554026 CAMTA2O94983 1202 aa14.47□□□□□ -0.09
IFT43-206ENST00000554026 DDX58O95786 925 aaKnown RBP14.47□□□□□ -0.09
IFT43-206ENST00000554026 HSP90AB3PQ58FF7 597 aa14.47□□□□□ -0.09
IFT43-206ENST00000554026 MSL1Q68DK7 614 aa14.47□□□□□ -0.09
IFT43-206ENST00000554026 CACNA1FO60840 1977 aa14.47□□□□□ -0.09
IFT43-206ENST00000554026 MMP10P09238 476 aa14.46□□□□□ -0.09
IFT43-206ENST00000554026 FKBP8Q14318 412 aa14.46□□□□□ -0.09
IFT43-206ENST00000554026 COPS6Q7L5N1 327 aa14.46□□□□□ -0.09
IFT43-206ENST00000554026 LRP10Q7Z4F1 713 aa14.46□□□□□ -0.09
IFT43-206ENST00000554026 ZNF784Q8NCA9 323 aaPredicted RBP14.46□□□□□ -0.09
IFT43-206ENST00000554026 SETDB2Q96T68 719 aa14.46□□□□□ -0.09
IFT43-206ENST00000554026 BCORQ6W2J9 1755 aa14.45□□□□□ -0.1
IFT43-206ENST00000554026 TM4SF1P30408 202 aa14.45□□□□□ -0.1
IFT43-206ENST00000554026 XAGE3Q8WTP9 111 aa14.45□□□□□ -0.1
IFT43-206ENST00000554026 CDCA7LQ96GN5 454 aa14.45□□□□□ -0.1
IFT43-206ENST00000554026 BCL2L12Q9HB09 334 aa14.45□□□□□ -0.1
IFT43-206ENST00000554026 PROSER3Q2NL68 480 aa14.44□□□□□ -0.1
IFT43-206ENST00000554026 GIGYF2Q6Y7W6 1299 aaKnown RBP14.44□□□□□ -0.1
IFT43-206ENST00000554026 ANKRD13DQ6ZTN6 518 aa14.44□□□□□ -0.1
IFT43-206ENST00000554026 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
IFT43-206ENST00000554026 CARMIL3Q8ND23 1372 aa14.44□□□□□ -0.1
IFT43-206ENST00000554026 ANXA1P04083 346 aa14.43□□□□□ -0.1
IFT43-206ENST00000554026 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
IFT43-206ENST00000554026 AIMP1Q12904 312 aaKnown RBP14.43□□□□□ -0.1
IFT43-206ENST00000554026 NFIXQ14938 502 aa14.43□□□□□ -0.1
IFT43-206ENST00000554026 TTLL7Q6ZT98 887 aa14.43□□□□□ -0.1
IFT43-206ENST00000554026 CD2APQ9Y5K6 639 aa14.43□□□□□ -0.1
IFT43-206ENST00000554026 ATP10DQ9P241 1426 aa14.42□□□□□ -0.1
IFT43-206ENST00000554026 ALDH1L2Q3SY69 923 aa14.42□□□□□ -0.1
IFT43-206ENST00000554026 PARP10Q53GL7 1025 aa14.42□□□□□ -0.1
IFT43-206ENST00000554026 TBC1D9BQ66K14 1250 aa14.42□□□□□ -0.1
IFT43-206ENST00000554026 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
IFT43-206ENST00000554026 NYXQ9GZU5 481 aa14.42□□□□□ -0.1
IFT43-206ENST00000554026 ZBTB3Q9H5J0 574 aa14.42□□□□□ -0.1
IFT43-206ENST00000554026 POLRMTO00411 1230 aaKnown RBP14.41□□□□□ -0.1
IFT43-206ENST00000554026 NPHP1O15259 732 aa14.41□□□□□ -0.1
IFT43-206ENST00000554026 SERPINB2P05120 415 aa14.41□□□□□ -0.1
IFT43-206ENST00000554026 RIC3Q7Z5B4 369 aa14.41□□□□□ -0.1
IFT43-206ENST00000554026 PDZRN3Q9UPQ7 1066 aa14.41□□□□□ -0.1
IFT43-206ENST00000554026 NIP7Q9Y221 180 aaKnown RBP eCLIP14.41□□□□□ -0.1
IFT43-206ENST00000554026 IBTKQ9P2D0 1353 aaPredicted RBP14.4□□□□□ -0.1
IFT43-206ENST00000554026 TCIRG1Q13488 830 aa14.4□□□□□ -0.1
IFT43-206ENST00000554026 HLFQ16534 295 aa14.4□□□□□ -0.1
IFT43-206ENST00000554026 TPTE2Q6XPS3 522 aa14.4□□□□□ -0.1
IFT43-206ENST00000554026 BICDL1Q6ZP65 573 aa14.4□□□□□ -0.1
IFT43-206ENST00000554026 PPP1R42Q7Z4L9 355 aa14.4□□□□□ -0.1
IFT43-206ENST00000554026 NUP98P52948 1817 aa14.4□□□□□ -0.1
IFT43-206ENST00000554026 RNF123Q5XPI4 1314 aa14.4□□□□□ -0.1
IFT43-206ENST00000554026 DDR1Q08345 913 aa14.39□□□□□ -0.11
IFT43-206ENST00000554026 NEXNQ0ZGT2 675 aa14.39□□□□□ -0.11
IFT43-206ENST00000554026 FLIIQ13045 1269 aa14.39□□□□□ -0.11
IFT43-206ENST00000554026 KSR2Q6VAB6 950 aa14.39□□□□□ -0.11
IFT43-206ENST00000554026 NBPF5PQ86XG9 351 aaPredicted RBP14.39□□□□□ -0.11
IFT43-206ENST00000554026 ZNF34Q8IZ26 560 aa14.39□□□□□ -0.11
IFT43-206ENST00000554026 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
IFT43-206ENST00000554026 TGFB2P61812 414 aa14.38□□□□□ -0.11
IFT43-206ENST00000554026 ST5P78524 1137 aa14.38□□□□□ -0.11
IFT43-206ENST00000554026 TRIM28Q13263 835 aaKnown RBP14.38□□□□□ -0.11
IFT43-206ENST00000554026 FKBP5Q13451 457 aaPredicted RBP14.38□□□□□ -0.11
IFT43-206ENST00000554026 CNBD1Q8NA66 436 aa14.38□□□□□ -0.11
IFT43-206ENST00000554026 NRXN2Q9P2S2 1712 aa14.38□□□□□ -0.11
IFT43-206ENST00000554026 GTF2E1P29083 439 aaPredicted RBP14.37□□□□□ -0.11
IFT43-206ENST00000554026 GPR162Q16538 588 aa14.37□□□□□ -0.11
IFT43-206ENST00000554026 C10orf71Q711Q0 1435 aa14.37□□□□□ -0.11
IFT43-206ENST00000554026 PTPRCP08575 1304 aa14.37□□□□□ -0.11
IFT43-206ENST00000554026 ANKRD36CQ5JPF3 1778 aa14.37□□□□□ -0.11
IFT43-206ENST00000554026 PI4KAP2A4QPH2 592 aa14.36□□□□□ -0.11
IFT43-206ENST00000554026 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
IFT43-206ENST00000554026 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
IFT43-206ENST00000554026 PDE6BP35913 854 aa14.36□□□□□ -0.11
IFT43-206ENST00000554026 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
IFT43-206ENST00000554026 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
IFT43-206ENST00000554026 PI4KAP1Q8N8J0 262 aa14.36□□□□□ -0.11
IFT43-206ENST00000554026 METTL22Q9BUU2 404 aaPredicted RBP14.36□□□□□ -0.11
IFT43-206ENST00000554026 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
IFT43-206ENST00000554026 SMC4Q9NTJ3 1288 aa14.36□□□□□ -0.11
IFT43-206ENST00000554026 ARFGEF2Q9Y6D5 1785 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 GPTP24298 496 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 PRR5LQ6MZQ0 368 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 MRPL50Q8N5N7 158 aaKnown RBP14.35□□□□□ -0.11
IFT43-206ENST00000554026 CCDC191Q8NCU4 936 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 ISCA1Q9BUE6 129 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 UTP14AQ9BVJ6 771 aaKnown RBP14.35□□□□□ -0.11
IFT43-206ENST00000554026 MAP3K2Q9Y2U5 619 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 AFDNP55196 1824 aaKnown RBP14.35□□□□□ -0.11
IFT43-206ENST00000554026 KIF13BQ9NQT8 1826 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 KIF16BQ96L93 1317 aa14.35□□□□□ -0.11
IFT43-206ENST00000554026 C1QTNF8P60827 252 aa14.34□□□□□ -0.11
IFT43-206ENST00000554026 G2E3Q7L622 706 aa14.34□□□□□ -0.11
IFT43-206ENST00000554026 NLRP10Q86W26 655 aa14.34□□□□□ -0.11
IFT43-206ENST00000554026 DNAAF4Q8WXU2 420 aa14.34□□□□□ -0.11
IFT43-206ENST00000554026 RIC1Q4ADV7 1423 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms