RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SETDB2Q96T68 719 aa30.14■■■□□ 2.42
NEK9-203ENST00000553945 DDX21Q9NR30 783 aaKnown RBP eCLIP30.13■■■□□ 2.41
NEK9-203ENST00000553945 CHPF2Q9P2E5 772 aa30.13■■■□□ 2.41
NEK9-203ENST00000553945 HLFQ16534 295 aa30.12■■■□□ 2.41
NEK9-203ENST00000553945 GPR162Q16538 588 aa30.12■■■□□ 2.41
NEK9-203ENST00000553945 LRP10Q7Z4F1 713 aa30.12■■■□□ 2.41
NEK9-203ENST00000553945 NRXN2Q9P2S2 1712 aa30.12■■■□□ 2.41
NEK9-203ENST00000553945 MAP3K15Q6ZN16 1313 aa30.12■■■□□ 2.41
NEK9-203ENST00000553945 CARMIL3Q8ND23 1372 aa30.12■■■□□ 2.41
NEK9-203ENST00000553945 GOLGB1Q14789 3259 aaKnown RBP30.12■■■□□ 2.41
NEK9-203ENST00000553945 ZBTB3Q9H5J0 574 aa30.11■■■□□ 2.41
NEK9-203ENST00000553945 ERVV-1B6SEH8 477 aa30.1■■■□□ 2.41
NEK9-203ENST00000553945 RGL2O15211 777 aa30.1■■■□□ 2.41
NEK9-203ENST00000553945 N4BP2Q86UW6 1770 aaPredicted RBP30.1■■■□□ 2.41
NEK9-203ENST00000553945 PXDNLA1KZ92 1463 aa30.09■■■□□ 2.41
NEK9-203ENST00000553945 TGFB2P61812 414 aa30.09■■■□□ 2.41
NEK9-203ENST00000553945 KIAA1551Q9HCM1 1747 aa30.09■■■□□ 2.41
NEK9-203ENST00000553945 DBF4Q9UBU7 674 aaPredicted RBP30.09■■■□□ 2.41
NEK9-203ENST00000553945 FANCIQ9NVI1 1328 aa30.08■■■□□ 2.41
NEK9-203ENST00000553945 AIMP1Q12904 312 aaKnown RBP30.08■■■□□ 2.41
NEK9-203ENST00000553945 TSPYL6Q8N831 410 aa30.08■■■□□ 2.41
NEK9-203ENST00000553945 XAGE3Q8WTP9 111 aa30.08■■■□□ 2.41
NEK9-203ENST00000553945 NIP7Q9Y221 180 aaKnown RBP eCLIP30.08■■■□□ 2.41
NEK9-203ENST00000553945 NUP98P52948 1817 aa30.08■■■□□ 2.41
NEK9-203ENST00000553945 A0A0G2JLW4 131 aa30.07■■■□□ 2.4
NEK9-203ENST00000553945 COPS6Q7L5N1 327 aa30.07■■■□□ 2.4
NEK9-203ENST00000553945 WWC3Q9ULE0 1092 aa30.07■■■□□ 2.4
NEK9-203ENST00000553945 NPHP1O15259 732 aa30.05■■■□□ 2.4
NEK9-203ENST00000553945 DPEP1P16444 411 aa30.05■■■□□ 2.4
NEK9-203ENST00000553945 SPINK5Q9NQ38 1064 aaPredicted RBP30.05■■■□□ 2.4
NEK9-203ENST00000553945 HYPKQ9NX55 129 aa30.04■■■□□ 2.4
NEK9-203ENST00000553945 GOLGA2Q08379 1002 aa30.03■■■□□ 2.4
NEK9-203ENST00000553945 TWISTNBQ3B726 338 aaPredicted RBP30.03■■■□□ 2.4
NEK9-203ENST00000553945 PRR5LQ6MZQ0 368 aa30.03■■■□□ 2.4
NEK9-203ENST00000553945 NBPF5PQ86XG9 351 aaPredicted RBP30.03■■■□□ 2.4
NEK9-203ENST00000553945 CCDC24Q8N4L8 307 aa30.03■■■□□ 2.4
NEK9-203ENST00000553945 CNBD1Q8NA66 436 aa30.03■■■□□ 2.4
NEK9-203ENST00000553945 CHMP4AQ9BY43 222 aa30.03■■■□□ 2.4
NEK9-203ENST00000553945 ZNF521Q96K83 1311 aa30.02■■■□□ 2.4
NEK9-203ENST00000553945 FAM177BA6PVY3 158 aa30.02■■■□□ 2.4
NEK9-203ENST00000553945 YBX3P16989 372 aaKnown RBP eCLIP30.02■■■□□ 2.4
NEK9-203ENST00000553945 CCDC30Q5VVM6 783 aa30.02■■■□□ 2.4
NEK9-203ENST00000553945 GIGYF2Q6Y7W6 1299 aaKnown RBP30.02■■■□□ 2.4
NEK9-203ENST00000553945 MYH16Q9H6N6 1097 aa30.02■■■□□ 2.4
NEK9-203ENST00000553945 GPTP24298 496 aa30.01■■■□□ 2.39
NEK9-203ENST00000553945 ATP10DQ9P241 1426 aa30.01■■■□□ 2.39
NEK9-203ENST00000553945 UTRNP46939 3433 aa30.01■■■□□ 2.39
NEK9-203ENST00000553945 CHRNA5P30532 468 aa30■■■□□ 2.39
NEK9-203ENST00000553945 ST5P78524 1137 aa29.99■■■□□ 2.39
NEK9-203ENST00000553945 EXOSC9Q06265 439 aaKnown RBP29.99■■■□□ 2.39
NEK9-203ENST00000553945 ANKRD31Q8N7Z5 1873 aa29.98■■■□□ 2.39
NEK9-203ENST00000553945 KCNA3P22001 575 aa29.98■■■□□ 2.39
NEK9-203ENST00000553945 TPTE2Q6XPS3 522 aa29.97■■■□□ 2.39
NEK9-203ENST00000553945 BRIP1Q9BX63 1249 aa29.97■■■□□ 2.39
NEK9-203ENST00000553945 TCERG1O14776 1098 aaKnown RBP29.96■■■□□ 2.39
NEK9-203ENST00000553945 C2CD5Q86YS7 1000 aa29.96■■■□□ 2.39
NEK9-203ENST00000553945 ZNF34Q8IZ26 560 aa29.96■■■□□ 2.39
NEK9-203ENST00000553945 BRCA1P38398 1863 aaKnown RBP29.95■■■□□ 2.39
NEK9-203ENST00000553945 GRIN3BO60391 1043 aa29.95■■■□□ 2.39
NEK9-203ENST00000553945 ANKRD13DQ6ZTN6 518 aa29.95■■■□□ 2.39
NEK9-203ENST00000553945 PLBD2Q8NHP8 589 aa29.95■■■□□ 2.39
NEK9-203ENST00000553945 STK31Q9BXU1 1019 aa29.95■■■□□ 2.39
NEK9-203ENST00000553945 PHAXQ9H814 394 aaKnown RBP29.95■■■□□ 2.39
NEK9-203ENST00000553945 PIM2Q9P1W9 311 aa29.95■■■□□ 2.39
NEK9-203ENST00000553945 BCS1LQ9Y276 419 aa29.95■■■□□ 2.39
NEK9-203ENST00000553945 ANKRD36CQ5JPF3 1778 aa29.95■■■□□ 2.38
NEK9-203ENST00000553945 UBN2Q6ZU65 1347 aa29.95■■■□□ 2.38
NEK9-203ENST00000553945 H0YIN7 160 aa29.94■■■□□ 2.38
NEK9-203ENST00000553945 GTF2E1P29083 439 aaPredicted RBP29.94■■■□□ 2.38
NEK9-203ENST00000553945 PDE6BP35913 854 aa29.94■■■□□ 2.38
NEK9-203ENST00000553945 HSP90AB3PQ58FF7 597 aa29.94■■■□□ 2.38
NEK9-203ENST00000553945 NYXQ9GZU5 481 aa29.94■■■□□ 2.38
NEK9-203ENST00000553945 SUSD4Q5VX71 490 aa29.92■■■□□ 2.38
NEK9-203ENST00000553945 DLEC1Q9Y238 1755 aa29.91■■■□□ 2.38
NEK9-203ENST00000553945 VAMP4O75379 141 aa29.91■■■□□ 2.38
NEK9-203ENST00000553945 TCIRG1Q13488 830 aa29.91■■■□□ 2.38
NEK9-203ENST00000553945 PARP10Q53GL7 1025 aa29.91■■■□□ 2.38
NEK9-203ENST00000553945 PDZRN3Q9UPQ7 1066 aa29.91■■■□□ 2.38
NEK9-203ENST00000553945 ARFGEF2Q9Y6D5 1785 aa29.9■■■□□ 2.38
NEK9-203ENST00000553945 E9PSI1 815 aa29.9■■■□□ 2.38
NEK9-203ENST00000553945 DALRD3Q5D0E6 543 aaKnown RBP29.9■■■□□ 2.38
NEK9-203ENST00000553945 RIC3Q7Z5B4 369 aa29.9■■■□□ 2.38
NEK9-203ENST00000553945 NUTM1Q86Y26 1132 aa29.9■■■□□ 2.38
NEK9-203ENST00000553945 COL11A2P13942 1736 aaPredicted RBP29.89■■■□□ 2.38
NEK9-203ENST00000553945 PPP1R42Q7Z4L9 355 aa29.89■■■□□ 2.38
NEK9-203ENST00000553945 SLC4A2P04920 1241 aa29.88■■■□□ 2.37
NEK9-203ENST00000553945 ERFEQ4G0M1 354 aa29.88■■■□□ 2.37
NEK9-203ENST00000553945 IBTKQ9P2D0 1353 aaPredicted RBP29.88■■■□□ 2.37
NEK9-203ENST00000553945 NTSR2O95665 410 aa29.87■■■□□ 2.37
NEK9-203ENST00000553945 DDX58O95786 925 aaKnown RBP29.87■■■□□ 2.37
NEK9-203ENST00000553945 SLFN5Q08AF3 891 aa29.87■■■□□ 2.37
NEK9-203ENST00000553945 ZNF622Q969S3 477 aaKnown RBP eCLIP29.87■■■□□ 2.37
NEK9-203ENST00000553945 NLRP10Q86W26 655 aa29.86■■■□□ 2.37
NEK9-203ENST00000553945 CDCA7LQ96GN5 454 aa29.86■■■□□ 2.37
NEK9-203ENST00000553945 UTP14AQ9BVJ6 771 aaKnown RBP29.86■■■□□ 2.37
NEK9-203ENST00000553945 CHD4Q14839 1912 aa29.86■■■□□ 2.37
NEK9-203ENST00000553945 ABCC12Q96J65 1359 aa29.86■■■□□ 2.37
NEK9-203ENST00000553945 ARFGEF1Q9Y6D6 1849 aa29.85■■■□□ 2.37
NEK9-203ENST00000553945 ATP5J2-PTCD1G3V325 749 aa29.84■■■□□ 2.37
NEK9-203ENST00000553945 G2E3Q7L622 706 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms