RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ATXN7O15265 892 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-210ENST00000553693 BNIP3LO60238 219 aa8.51□□□□□ -1.05
SCFD1-210ENST00000553693 BMP4P12644 408 aa8.51□□□□□ -1.05
SCFD1-210ENST00000553693 NOS2P35228 1153 aa8.51□□□□□ -1.05
SCFD1-210ENST00000553693 PSMA6P60900 246 aaKnown RBP8.51□□□□□ -1.05
SCFD1-210ENST00000553693 OXCT2Q9BYC2 517 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-210ENST00000553693 PARP3Q9Y6F1 533 aa8.51□□□□□ -1.05
SCFD1-210ENST00000553693 CHRNA4P43681 627 aa8.5□□□□□ -1.05
SCFD1-210ENST00000553693 SEC13P55735 322 aa8.5□□□□□ -1.05
SCFD1-210ENST00000553693 GRIN2CQ14957 1233 aa8.5□□□□□ -1.05
SCFD1-210ENST00000553693 TBCELQ5QJ74 424 aa8.5□□□□□ -1.05
SCFD1-210ENST00000553693 LINC00114Q6XXX2 140 aa8.5□□□□□ -1.05
SCFD1-210ENST00000553693 ZIC5Q96T25 663 aa8.5□□□□□ -1.05
SCFD1-210ENST00000553693 ZCCHC2Q9C0B9 1178 aaKnown RBP8.5□□□□□ -1.05
SCFD1-210ENST00000553693 TSPAN10Q9H1Z9 355 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-210ENST00000553693 GDF2Q9UK05 429 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-210ENST00000553693 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
SCFD1-210ENST00000553693 LMOD1P29536 600 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-210ENST00000553693 TXLNAP40222 546 aa8.49□□□□□ -1.05
SCFD1-210ENST00000553693 HIRAP54198 1017 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-210ENST00000553693 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
SCFD1-210ENST00000553693 TSEN2Q8NCE0 465 aaKnown RBP8.49□□□□□ -1.05
SCFD1-210ENST00000553693 VRTNQ9H8Y1 702 aa8.49□□□□□ -1.05
SCFD1-210ENST00000553693 ZNF777Q9ULD5 760 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-210ENST00000553693 FAM196BA6NMK8 535 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L15C9J2P7 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L10C9JJH3 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L13C9JLJ4 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L12C9JPN9 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L11C9JVI0 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L21D6R901 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L18D6R9N7 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L22D6RA61 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L17D6RBQ6 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L19D6RCP7 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L20D6RJB6 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 EML1O00423 815 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 FAM157BP0CG42 384 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 USP17L24Q0WX57 530 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 DOC2BQ14184 412 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 GOLGA6L1Q8N7Z2 621 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
SCFD1-210ENST00000553693 DCDC2BA2VCK2 349 aa8.47□□□□□ -1.05
SCFD1-210ENST00000553693 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-210ENST00000553693 DKK1O94907 266 aa8.47□□□□□ -1.05
SCFD1-210ENST00000553693 PTK7Q13308 1070 aa8.47□□□□□ -1.05
SCFD1-210ENST00000553693 KANK4Q5T7N3 995 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-210ENST00000553693 NEUROD4Q9HD90 331 aa8.47□□□□□ -1.05
SCFD1-210ENST00000553693 KHNYNO15037 678 aaKnown RBP8.46□□□□□ -1.06
SCFD1-210ENST00000553693 MAPTP10636 758 aaKnown RBP8.46□□□□□ -1.06
SCFD1-210ENST00000553693 TNP2Q05952 138 aa8.46□□□□□ -1.06
SCFD1-210ENST00000553693 CRTC2Q53ET0 693 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-210ENST00000553693 FAM182BQ5T319 152 aa8.46□□□□□ -1.06
SCFD1-210ENST00000553693 C1orf53Q5VUE5 145 aa8.46□□□□□ -1.06
SCFD1-210ENST00000553693 POTEAQ6S8J7 498 aa8.46□□□□□ -1.06
SCFD1-210ENST00000553693 STAG2Q8N3U4 1231 aa8.46□□□□□ -1.06
SCFD1-210ENST00000553693 GAS2L2Q8NHY3 880 aa8.46□□□□□ -1.06
SCFD1-210ENST00000553693 RHPN1Q8TCX5 695 aa8.46□□□□□ -1.06
SCFD1-210ENST00000553693 ARAFP10398 606 aa8.45□□□□□ -1.06
SCFD1-210ENST00000553693 CTBSQ01459 385 aa8.45□□□□□ -1.06
SCFD1-210ENST00000553693 DPYDQ12882 1025 aa8.45□□□□□ -1.06
SCFD1-210ENST00000553693 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
SCFD1-210ENST00000553693 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
SCFD1-210ENST00000553693 SLCO4C1Q6ZQN7 724 aa8.45□□□□□ -1.06
SCFD1-210ENST00000553693 ANKMY2Q8IV38 441 aa8.45□□□□□ -1.06
SCFD1-210ENST00000553693 RRAGCQ9HB90 399 aa8.45□□□□□ -1.06
SCFD1-210ENST00000553693 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
SCFD1-210ENST00000553693 GOLGA2P5Q9HBQ8 144 aa8.44□□□□□ -1.06
SCFD1-210ENST00000553693 SCO2A0A1W2PP80 73 aa8.43□□□□□ -1.06
SCFD1-210ENST00000553693 C2CD2LO14523 706 aa8.43□□□□□ -1.06
SCFD1-210ENST00000553693 SH3PXD2AQ5TCZ1 1133 aa8.43□□□□□ -1.06
SCFD1-210ENST00000553693 SCG3Q8WXD2 468 aaKnown RBP8.43□□□□□ -1.06
SCFD1-210ENST00000553693 HINFPQ9BQA5 517 aa8.43□□□□□ -1.06
SCFD1-210ENST00000553693 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
SCFD1-210ENST00000553693 AVENQ9NQS1 362 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-210ENST00000553693 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
SCFD1-210ENST00000553693 EFSO43281 561 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 C21orf2O43822 256 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 CD33P20138 364 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 HIF1AQ16665 826 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 ARTNQ5T4W7 220 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 EDARADDQ8WWZ3 215 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 KRTAP4-7Q9BYR0 210 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 ZMYND15Q9H091 742 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 MARK1Q9P0L2 795 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 GGA1Q9UJY5 639 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
SCFD1-210ENST00000553693 ADH6P28332 368 aa8.41□□□□□ -1.06
SCFD1-210ENST00000553693 C2orf49Q9BVC5 232 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-210ENST00000553693 ZFP64Q9NPA5 681 aa8.41□□□□□ -1.06
SCFD1-210ENST00000553693 HCN4Q9Y3Q4 1203 aa8.41□□□□□ -1.06
SCFD1-210ENST00000553693 IGFBP4P22692 258 aa8.4□□□□□ -1.06
SCFD1-210ENST00000553693 CHMP7Q8WUX9 453 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-210ENST00000553693 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
SCFD1-210ENST00000553693 RFX1P22670 979 aa8.39□□□□□ -1.07
SCFD1-210ENST00000553693 RSPO4Q2I0M5 234 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-210ENST00000553693 ZNF468Q5VIY5 522 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-210ENST00000553693 FAM200AQ8TCP9 573 aa8.39□□□□□ -1.07
SCFD1-210ENST00000553693 C7orf43Q8WVR3 580 aa8.39□□□□□ -1.07
SCFD1-210ENST00000553693 NEURL1BA8MQ27 555 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms