RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ANKLE2Q86XL3 938 aa9.83□□□□□ -0.84
ATXN3-223ENST00000553686 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
ATXN3-223ENST00000553686 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
ATXN3-223ENST00000553686 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-223ENST00000553686 TMEM214Q6NUQ4 689 aaKnown RBP9.82□□□□□ -0.84
ATXN3-223ENST00000553686 NBPF10Q6P3W6 841 aaKnown RBP9.82□□□□□ -0.84
ATXN3-223ENST00000553686 NBPF15Q8N660 670 aa9.82□□□□□ -0.84
ATXN3-223ENST00000553686 FHDC1Q9C0D6 1143 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-223ENST00000553686 SERTAD1Q9UHV2 236 aa9.82□□□□□ -0.84
ATXN3-223ENST00000553686 SPATA31C2B4DYI2 1134 aa9.81□□□□□ -0.84
ATXN3-223ENST00000553686 GMPRP36959 345 aa9.81□□□□□ -0.84
ATXN3-223ENST00000553686 PSME1Q06323 249 aa9.81□□□□□ -0.84
ATXN3-223ENST00000553686 TRIM50Q86XT4 487 aa9.81□□□□□ -0.84
ATXN3-223ENST00000553686 PPP1R12CQ9BZL4 782 aa9.81□□□□□ -0.84
ATXN3-223ENST00000553686 MKRN1Q9UHC7 482 aaKnown RBP9.81□□□□□ -0.84
ATXN3-223ENST00000553686 PALM3A6NDB9 673 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-223ENST00000553686 TMEM229AB2RXF0 380 aa9.8□□□□□ -0.84
ATXN3-223ENST00000553686 ITGA6P23229 1130 aa9.8□□□□□ -0.84
ATXN3-223ENST00000553686 TLR1Q15399 786 aa9.8□□□□□ -0.84
ATXN3-223ENST00000553686 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
ATXN3-223ENST00000553686 TAS1R3Q7RTX0 852 aa9.8□□□□□ -0.84
ATXN3-223ENST00000553686 RAPGEF6Q8TEU7 1601 aa9.8□□□□□ -0.84
ATXN3-223ENST00000553686 MLH3Q9UHC1 1453 aa9.79□□□□□ -0.84
ATXN3-223ENST00000553686 WASLO00401 505 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-223ENST00000553686 PHKA2P46019 1235 aa9.79□□□□□ -0.84
ATXN3-223ENST00000553686 GNASQ5JWF2 1037 aa9.79□□□□□ -0.84
ATXN3-223ENST00000553686 THEMISQ8N1K5 641 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-223ENST00000553686 VWA5B2Q8N398 1253 aa9.79□□□□□ -0.84
ATXN3-223ENST00000553686 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
ATXN3-223ENST00000553686 ZBTB7BO15156 539 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-223ENST00000553686 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
ATXN3-223ENST00000553686 RANGAP1P46060 587 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-223ENST00000553686 SMTNP53814 917 aa9.78□□□□□ -0.84
ATXN3-223ENST00000553686 PPARGC1BQ86YN6 1023 aaKnown RBP9.78□□□□□ -0.84
ATXN3-223ENST00000553686 NANOS1Q8WY41 292 aaKnown RBP9.78□□□□□ -0.84
ATXN3-223ENST00000553686 SLC4A9Q96Q91 983 aa9.78□□□□□ -0.84
ATXN3-223ENST00000553686 GAS2L1Q99501 681 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-223ENST00000553686 DYRK1BQ9Y463 629 aa9.78□□□□□ -0.84
ATXN3-223ENST00000553686 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-223ENST00000553686 PRXQ9BXM0 1461 aa9.78□□□□□ -0.84
ATXN3-223ENST00000553686 REREQ9P2R6 1566 aa9.77□□□□□ -0.85
ATXN3-223ENST00000553686 ATP1A2P50993 1020 aa9.77□□□□□ -0.85
ATXN3-223ENST00000553686 OGFOD1Q8N543 542 aa9.77□□□□□ -0.85
ATXN3-223ENST00000553686 GPR161Q8N6U8 529 aaKnown RBP9.77□□□□□ -0.85
ATXN3-223ENST00000553686 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATXN3-223ENST00000553686 C3P01024 1663 aa9.77□□□□□ -0.85
ATXN3-223ENST00000553686 CDC14CA4D256 554 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 BACH1O14867 736 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 WIPF1O43516 503 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 LMOD1P29536 600 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-223ENST00000553686 CLDN10P78369 228 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 C4orf17Q53FE4 359 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 CCDC102BQ68D86 513 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 GGT6Q6P531 493 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 RIPOR1Q6ZS17 1223 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 SV2AQ7L0J3 742 aa9.76□□□□□ -0.85
ATXN3-223ENST00000553686 DNAAF2Q9NVR5 837 aaKnown RBP9.76□□□□□ -0.85
ATXN3-223ENST00000553686 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-223ENST00000553686 A6NJY4 79 aa9.75□□□□□ -0.85
ATXN3-223ENST00000553686 RHBDD1Q8TEB9 315 aa9.75□□□□□ -0.85
ATXN3-223ENST00000553686 ZNF358Q9NW07 568 aa9.75□□□□□ -0.85
ATXN3-223ENST00000553686 KIAA1024Q9UPX6 916 aa9.75□□□□□ -0.85
ATXN3-223ENST00000553686 CDK2AP1O14519 115 aa9.74□□□□□ -0.85
ATXN3-223ENST00000553686 F11P03951 625 aa9.74□□□□□ -0.85
ATXN3-223ENST00000553686 RASA1P20936 1047 aa9.74□□□□□ -0.85
ATXN3-223ENST00000553686 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-223ENST00000553686 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
ATXN3-223ENST00000553686 TPCN2Q8NHX9 752 aa9.74□□□□□ -0.85
ATXN3-223ENST00000553686 SRCAPQ6ZRS2 3230 aa9.73□□□□□ -0.85
ATXN3-223ENST00000553686 A2ML1A8K2U0 1454 aa9.73□□□□□ -0.85
ATXN3-223ENST00000553686 KDM5CP41229 1560 aa9.73□□□□□ -0.85
ATXN3-223ENST00000553686 DBN1Q16643 649 aa9.73□□□□□ -0.85
ATXN3-223ENST00000553686 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
ATXN3-223ENST00000553686 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
ATXN3-223ENST00000553686 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
ATXN3-223ENST00000553686 DIP2CQ9Y2E4 1556 aa9.72□□□□□ -0.85
ATXN3-223ENST00000553686 MTFR1Q15390 333 aa9.72□□□□□ -0.85
ATXN3-223ENST00000553686 KANK4Q5T7N3 995 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-223ENST00000553686 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
ATXN3-223ENST00000553686 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-223ENST00000553686 VRTNQ9H8Y1 702 aa9.72□□□□□ -0.85
ATXN3-223ENST00000553686 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
ATXN3-223ENST00000553686 CEP170BQ9Y4F5 1589 aaPredicted RBP9.71□□□□□ -0.85
ATXN3-223ENST00000553686 A0A1B0GTH6 734 aa9.71□□□□□ -0.86
ATXN3-223ENST00000553686 H7C1W4 665 aa9.71□□□□□ -0.86
ATXN3-223ENST00000553686 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
ATXN3-223ENST00000553686 TNS4Q8IZW8 715 aa9.71□□□□□ -0.86
ATXN3-223ENST00000553686 GMCL1Q96IK5 515 aa9.71□□□□□ -0.86
ATXN3-223ENST00000553686 GPAMQ9HCL2 828 aa9.71□□□□□ -0.86
ATXN3-223ENST00000553686 SPAG9O60271 1321 aaKnown RBP9.71□□□□□ -0.86
ATXN3-223ENST00000553686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.71□□□□□ -0.86
ATXN3-223ENST00000553686 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-223ENST00000553686 RXRBP28702 533 aa9.7□□□□□ -0.86
ATXN3-223ENST00000553686 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-223ENST00000553686 CFAP70Q5T0N1 1121 aa9.7□□□□□ -0.86
ATXN3-223ENST00000553686 C14orf37Q86TY3 774 aa9.7□□□□□ -0.86
ATXN3-223ENST00000553686 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
ATXN3-223ENST00000553686 COL25A1Q9BXS0 654 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-223ENST00000553686 IQSEC3Q9UPP2 1182 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-223ENST00000553686 ARHGAP5Q13017 1502 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms