RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TSPYL6Q8N831 410 aa29.51■■■□□ 2.31
TDP1-206ENST00000553569 DDX21Q9NR30 783 aaKnown RBP eCLIP29.51■■■□□ 2.31
TDP1-206ENST00000553569 LRP10Q7Z4F1 713 aa29.5■■■□□ 2.31
TDP1-206ENST00000553569 MAP3K15Q6ZN16 1313 aa29.49■■■□□ 2.31
TDP1-206ENST00000553569 ZBTB3Q9H5J0 574 aa29.49■■■□□ 2.31
TDP1-206ENST00000553569 NRXN2Q9P2S2 1712 aa29.48■■■□□ 2.31
TDP1-206ENST00000553569 NUP98P52948 1817 aa29.48■■■□□ 2.31
TDP1-206ENST00000553569 HLFQ16534 295 aa29.48■■■□□ 2.31
TDP1-206ENST00000553569 MYH16Q9H6N6 1097 aa29.48■■■□□ 2.31
TDP1-206ENST00000553569 SERPINB2P05120 415 aa29.47■■■□□ 2.31
TDP1-206ENST00000553569 GOLGA2Q08379 1002 aa29.47■■■□□ 2.31
TDP1-206ENST00000553569 AIMP1Q12904 312 aaKnown RBP29.47■■■□□ 2.31
TDP1-206ENST00000553569 CLEC4GQ6UXB4 293 aa29.47■■■□□ 2.31
TDP1-206ENST00000553569 XAGE3Q8WTP9 111 aa29.47■■■□□ 2.31
TDP1-206ENST00000553569 DBF4Q9UBU7 674 aaPredicted RBP29.47■■■□□ 2.31
TDP1-206ENST00000553569 CARMIL3Q8ND23 1372 aa29.47■■■□□ 2.31
TDP1-206ENST00000553569 TWISTNBQ3B726 338 aaPredicted RBP29.46■■■□□ 2.31
TDP1-206ENST00000553569 SETDB2Q96T68 719 aa29.46■■■□□ 2.31
TDP1-206ENST00000553569 ERVV-1B6SEH8 477 aa29.45■■■□□ 2.31
TDP1-206ENST00000553569 COPS6Q7L5N1 327 aa29.45■■■□□ 2.31
TDP1-206ENST00000553569 N4BP2Q86UW6 1770 aaPredicted RBP29.44■■■□□ 2.3
TDP1-206ENST00000553569 EXOSC9Q06265 439 aaKnown RBP29.44■■■□□ 2.3
TDP1-206ENST00000553569 KIAA1551Q9HCM1 1747 aa29.44■■■□□ 2.3
TDP1-206ENST00000553569 RGL2O15211 777 aa29.43■■■□□ 2.3
TDP1-206ENST00000553569 CCDC30Q5VVM6 783 aa29.43■■■□□ 2.3
TDP1-206ENST00000553569 NIP7Q9Y221 180 aaKnown RBP eCLIP29.43■■■□□ 2.3
TDP1-206ENST00000553569 PELP1Q8IZL8 1130 aaKnown RBP29.42■■■□□ 2.3
TDP1-206ENST00000553569 HYPKQ9NX55 129 aa29.42■■■□□ 2.3
TDP1-206ENST00000553569 PXDNLA1KZ92 1463 aa29.42■■■□□ 2.3
TDP1-206ENST00000553569 TCERG1O14776 1098 aaKnown RBP29.41■■■□□ 2.3
TDP1-206ENST00000553569 NPHP1O15259 732 aa29.41■■■□□ 2.3
TDP1-206ENST00000553569 ATP10DQ9P241 1426 aa29.4■■■□□ 2.3
TDP1-206ENST00000553569 DCAF8L1A6NGE4 600 aa29.4■■■□□ 2.3
TDP1-206ENST00000553569 CHMP4AQ9BY43 222 aa29.4■■■□□ 2.3
TDP1-206ENST00000553569 WWC3Q9ULE0 1092 aa29.4■■■□□ 2.3
TDP1-206ENST00000553569 FAM177BA6PVY3 158 aa29.39■■■□□ 2.3
TDP1-206ENST00000553569 CCDC24Q8N4L8 307 aa29.39■■■□□ 2.3
TDP1-206ENST00000553569 GPTP24298 496 aa29.38■■■□□ 2.29
TDP1-206ENST00000553569 GIGYF2Q6Y7W6 1299 aaKnown RBP29.38■■■□□ 2.29
TDP1-206ENST00000553569 NBPF5PQ86XG9 351 aaPredicted RBP29.38■■■□□ 2.29
TDP1-206ENST00000553569 CNBD1Q8NA66 436 aa29.38■■■□□ 2.29
TDP1-206ENST00000553569 ANKRD36CQ5JPF3 1778 aa29.38■■■□□ 2.29
TDP1-206ENST00000553569 E9PSI1 815 aa29.37■■■□□ 2.29
TDP1-206ENST00000553569 TGFB2P61812 414 aa29.37■■■□□ 2.29
TDP1-206ENST00000553569 PRR5LQ6MZQ0 368 aa29.37■■■□□ 2.29
TDP1-206ENST00000553569 STK31Q9BXU1 1019 aa29.37■■■□□ 2.29
TDP1-206ENST00000553569 PHAXQ9H814 394 aaKnown RBP29.37■■■□□ 2.29
TDP1-206ENST00000553569 ANKRD31Q8N7Z5 1873 aa29.36■■■□□ 2.29
TDP1-206ENST00000553569 A0A0G2JLW4 131 aa29.36■■■□□ 2.29
TDP1-206ENST00000553569 GPR162Q16538 588 aa29.36■■■□□ 2.29
TDP1-206ENST00000553569 ARFGEF2Q9Y6D5 1785 aa29.35■■■□□ 2.29
TDP1-206ENST00000553569 DPEP1P16444 411 aa29.35■■■□□ 2.29
TDP1-206ENST00000553569 CDCA7LQ96GN5 454 aa29.35■■■□□ 2.29
TDP1-206ENST00000553569 VAMP4O75379 141 aa29.34■■■□□ 2.29
TDP1-206ENST00000553569 ST5P78524 1137 aa29.34■■■□□ 2.29
TDP1-206ENST00000553569 HNRNPUQ00839 825 aaKnown RBP eCLIP29.34■■■□□ 2.29
TDP1-206ENST00000553569 SLFN5Q08AF3 891 aa29.34■■■□□ 2.29
TDP1-206ENST00000553569 UBN2Q6ZU65 1347 aa29.34■■■□□ 2.29
TDP1-206ENST00000553569 ANKRD13DQ6ZTN6 518 aa29.33■■■□□ 2.29
TDP1-206ENST00000553569 PLBD2Q8NHP8 589 aa29.33■■■□□ 2.29
TDP1-206ENST00000553569 CHRNA5P30532 468 aa29.32■■■□□ 2.28
TDP1-206ENST00000553569 ZNF34Q8IZ26 560 aa29.32■■■□□ 2.28
TDP1-206ENST00000553569 BRCA1P38398 1863 aaKnown RBP29.31■■■□□ 2.28
TDP1-206ENST00000553569 HSP90AB3PQ58FF7 597 aa29.31■■■□□ 2.28
TDP1-206ENST00000553569 YBX3P16989 372 aaKnown RBP eCLIP29.3■■■□□ 2.28
TDP1-206ENST00000553569 TPTE2Q6XPS3 522 aa29.3■■■□□ 2.28
TDP1-206ENST00000553569 COL11A2P13942 1736 aaPredicted RBP29.29■■■□□ 2.28
TDP1-206ENST00000553569 SLC4A2P04920 1241 aa29.29■■■□□ 2.28
TDP1-206ENST00000553569 GTF2E1P29083 439 aaPredicted RBP29.29■■■□□ 2.28
TDP1-206ENST00000553569 RIC3Q7Z5B4 369 aa29.29■■■□□ 2.28
TDP1-206ENST00000553569 DLEC1Q9Y238 1755 aa29.29■■■□□ 2.28
TDP1-206ENST00000553569 CACNA1FO60840 1977 aa29.28■■■□□ 2.28
TDP1-206ENST00000553569 TCIRG1Q13488 830 aa29.28■■■□□ 2.28
TDP1-206ENST00000553569 SUSD4Q5VX71 490 aa29.28■■■□□ 2.28
TDP1-206ENST00000553569 C2CD5Q86YS7 1000 aa29.28■■■□□ 2.28
TDP1-206ENST00000553569 BRIP1Q9BX63 1249 aa29.28■■■□□ 2.28
TDP1-206ENST00000553569 NYXQ9GZU5 481 aa29.28■■■□□ 2.28
TDP1-206ENST00000553569 DDX58O95786 925 aaKnown RBP29.27■■■□□ 2.28
TDP1-206ENST00000553569 KCNA3P22001 575 aa29.27■■■□□ 2.28
TDP1-206ENST00000553569 PARP10Q53GL7 1025 aa29.27■■■□□ 2.28
TDP1-206ENST00000553569 G2E3Q7L622 706 aa29.27■■■□□ 2.28
TDP1-206ENST00000553569 NUTM1Q86Y26 1132 aa29.27■■■□□ 2.28
TDP1-206ENST00000553569 IBTKQ9P2D0 1353 aaPredicted RBP29.26■■■□□ 2.28
TDP1-206ENST00000553569 PDE6BP35913 854 aa29.26■■■□□ 2.27
TDP1-206ENST00000553569 ABCC12Q96J65 1359 aa29.26■■■□□ 2.27
TDP1-206ENST00000553569 TNRC6CQ9HCJ0 1690 aaKnown RBP29.25■■■□□ 2.27
TDP1-206ENST00000553569 PPP1R42Q7Z4L9 355 aa29.25■■■□□ 2.27
TDP1-206ENST00000553569 ZNF428Q96B54 188 aa29.25■■■□□ 2.27
TDP1-206ENST00000553569 BCS1LQ9Y276 419 aa29.25■■■□□ 2.27
TDP1-206ENST00000553569 ATP5J2-PTCD1G3V325 749 aa29.24■■■□□ 2.27
TDP1-206ENST00000553569 H0YIN7 160 aa29.24■■■□□ 2.27
TDP1-206ENST00000553569 NTSR2O95665 410 aa29.24■■■□□ 2.27
TDP1-206ENST00000553569 ERFEQ4G0M1 354 aa29.24■■■□□ 2.27
TDP1-206ENST00000553569 NLRP10Q86W26 655 aa29.24■■■□□ 2.27
TDP1-206ENST00000553569 PIM2Q9P1W9 311 aa29.24■■■□□ 2.27
TDP1-206ENST00000553569 UTP14AQ9BVJ6 771 aaKnown RBP29.23■■■□□ 2.27
TDP1-206ENST00000553569 FLIIQ13045 1269 aa29.22■■■□□ 2.27
TDP1-206ENST00000553569 TRMT2AQ8IZ69 625 aaKnown RBP29.22■■■□□ 2.27
TDP1-206ENST00000553569 MYD88Q99836 296 aa29.22■■■□□ 2.27
TDP1-206ENST00000553569 ISCA1Q9BUE6 129 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms