RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ANXA1P04083 346 aa30.73■■■□□ 2.51
TDP1-205ENST00000553527 FAM177BA6PVY3 158 aa30.72■■■□□ 2.51
TDP1-205ENST00000553527 KIF6Q6ZMV9 814 aa30.72■■■□□ 2.51
TDP1-205ENST00000553527 MIER1Q8N108 512 aa30.72■■■□□ 2.51
TDP1-205ENST00000553527 MBIPQ9NS73 344 aa30.72■■■□□ 2.51
TDP1-205ENST00000553527 NIP7Q9Y221 180 aaKnown RBP eCLIP30.72■■■□□ 2.51
TDP1-205ENST00000553527 CALD1Q05682 793 aaKnown RBP30.71■■■□□ 2.51
TDP1-205ENST00000553527 PRR5LQ6MZQ0 368 aa30.71■■■□□ 2.51
TDP1-205ENST00000553527 NUP98P52948 1817 aa30.7■■■□□ 2.51
TDP1-205ENST00000553527 CCER2I3L3R5 266 aa30.7■■■□□ 2.51
TDP1-205ENST00000553527 FAM9BQ8IZU0 186 aa30.7■■■□□ 2.51
TDP1-205ENST00000553527 CNBD1Q8NA66 436 aa30.7■■■□□ 2.51
TDP1-205ENST00000553527 ZBTB3Q9H5J0 574 aa30.7■■■□□ 2.51
TDP1-205ENST00000553527 PROSER3Q2NL68 480 aa30.69■■■□□ 2.5
TDP1-205ENST00000553527 DALRD3Q5D0E6 543 aaKnown RBP30.69■■■□□ 2.5
TDP1-205ENST00000553527 NBPF5PQ86XG9 351 aaPredicted RBP30.69■■■□□ 2.5
TDP1-205ENST00000553527 C2CD5Q86YS7 1000 aa30.69■■■□□ 2.5
TDP1-205ENST00000553527 SALL2Q9Y467 1007 aaPredicted RBP30.69■■■□□ 2.5
TDP1-205ENST00000553527 ERBB4Q15303 1308 aa30.69■■■□□ 2.5
TDP1-205ENST00000553527 GNAI1P63096 354 aa30.68■■■□□ 2.5
TDP1-205ENST00000553527 PDIA6Q15084 440 aa30.68■■■□□ 2.5
TDP1-205ENST00000553527 ARHGAP27Q6ZUM4 889 aa30.68■■■□□ 2.5
TDP1-205ENST00000553527 IFT57Q9NWB7 429 aa30.68■■■□□ 2.5
TDP1-205ENST00000553527 MAP3K15Q6ZN16 1313 aa30.68■■■□□ 2.5
TDP1-205ENST00000553527 ANKRD31Q8N7Z5 1873 aa30.67■■■□□ 2.5
TDP1-205ENST00000553527 H0YIN7 160 aa30.67■■■□□ 2.5
TDP1-205ENST00000553527 ZNF853P0CG23 659 aa30.66■■■□□ 2.5
TDP1-205ENST00000553527 ST5P78524 1137 aa30.66■■■□□ 2.5
TDP1-205ENST00000553527 AIMP1Q12904 312 aaKnown RBP30.66■■■□□ 2.5
TDP1-205ENST00000553527 ZNF784Q8NCA9 323 aaPredicted RBP30.66■■■□□ 2.5
TDP1-205ENST00000553527 ERVV-1B6SEH8 477 aa30.65■■■□□ 2.5
TDP1-205ENST00000553527 ELL2O00472 640 aaPredicted RBP30.65■■■□□ 2.5
TDP1-205ENST00000553527 DUSP27Q5VZP5 1158 aa30.65■■■□□ 2.5
TDP1-205ENST00000553527 BRIP1Q9BX63 1249 aa30.65■■■□□ 2.5
TDP1-205ENST00000553527 ARFGEF1Q9Y6D6 1849 aa30.64■■■□□ 2.5
TDP1-205ENST00000553527 PDE6BP35913 854 aa30.64■■■□□ 2.5
TDP1-205ENST00000553527 HDGFL1Q5TGJ6 251 aa30.64■■■□□ 2.5
TDP1-205ENST00000553527 GPTP24298 496 aa30.63■■■□□ 2.49
TDP1-205ENST00000553527 ZNF622Q969S3 477 aaKnown RBP eCLIP30.63■■■□□ 2.49
TDP1-205ENST00000553527 RGL2O15211 777 aa30.62■■■□□ 2.49
TDP1-205ENST00000553527 GTF2E1P29083 439 aaPredicted RBP30.62■■■□□ 2.49
TDP1-205ENST00000553527 TPTE2Q6XPS3 522 aa30.62■■■□□ 2.49
TDP1-205ENST00000553527 COPS6Q7L5N1 327 aa30.62■■■□□ 2.49
TDP1-205ENST00000553527 LRP10Q7Z4F1 713 aa30.62■■■□□ 2.49
TDP1-205ENST00000553527 CHPF2Q9P2E5 772 aa30.62■■■□□ 2.49
TDP1-205ENST00000553527 WWC1Q8IX03 1113 aa30.61■■■□□ 2.49
TDP1-205ENST00000553527 XAGE3Q8WTP9 111 aa30.61■■■□□ 2.49
TDP1-205ENST00000553527 DDX21Q9NR30 783 aaKnown RBP eCLIP30.6■■■□□ 2.49
TDP1-205ENST00000553527 DLEC1Q9Y238 1755 aa30.6■■■□□ 2.49
TDP1-205ENST00000553527 TTLL6Q8N841 843 aa30.59■■■□□ 2.49
TDP1-205ENST00000553527 HOXB7P09629 217 aa30.58■■■□□ 2.49
TDP1-205ENST00000553527 CCDC27Q2M243 656 aa30.58■■■□□ 2.49
TDP1-205ENST00000553527 TSR2Q969E8 191 aaKnown RBP30.58■■■□□ 2.49
TDP1-205ENST00000553527 CACNA1SQ13698 1873 aa30.57■■■□□ 2.48
TDP1-205ENST00000553527 GIGYF2Q6Y7W6 1299 aaKnown RBP30.57■■■□□ 2.48
TDP1-205ENST00000553527 C8orf58Q8NAV2 365 aa30.57■■■□□ 2.48
TDP1-205ENST00000553527 ZNF219Q9P2Y4 722 aaPredicted RBP30.56■■■□□ 2.48
TDP1-205ENST00000553527 DBF4Q9UBU7 674 aaPredicted RBP30.56■■■□□ 2.48
TDP1-205ENST00000553527 PDZRN3Q9UPQ7 1066 aa30.56■■■□□ 2.48
TDP1-205ENST00000553527 COL11A2P13942 1736 aaPredicted RBP30.56■■■□□ 2.48
TDP1-205ENST00000553527 NUTM1Q86Y26 1132 aa30.55■■■□□ 2.48
TDP1-205ENST00000553527 NYXQ9GZU5 481 aa30.54■■■□□ 2.48
TDP1-205ENST00000553527 UBN2Q6ZU65 1347 aa30.53■■■□□ 2.48
TDP1-205ENST00000553527 SUSD4Q5VX71 490 aa30.53■■■□□ 2.48
TDP1-205ENST00000553527 ZNF34Q8IZ26 560 aa30.53■■■□□ 2.48
TDP1-205ENST00000553527 ATP10DQ9P241 1426 aa30.53■■■□□ 2.48
TDP1-205ENST00000553527 ZNF526Q8TF50 670 aaPredicted RBP30.52■■■□□ 2.48
TDP1-205ENST00000553527 SRGNP10124 158 aa30.51■■■□□ 2.47
TDP1-205ENST00000553527 ERFEQ4G0M1 354 aa30.51■■■□□ 2.47
TDP1-205ENST00000553527 TSPYL6Q8N831 410 aa30.51■■■□□ 2.47
TDP1-205ENST00000553527 ZNF428Q96B54 188 aa30.5■■■□□ 2.47
TDP1-205ENST00000553527 MASTLQ96GX5 879 aa30.5■■■□□ 2.47
TDP1-205ENST00000553527 HYPKQ9NX55 129 aa30.5■■■□□ 2.47
TDP1-205ENST00000553527 SLX4Q8IY92 1834 aa30.48■■■□□ 2.47
TDP1-205ENST00000553527 C21orf2O43822 256 aa30.48■■■□□ 2.47
TDP1-205ENST00000553527 NCBP3Q53F19 620 aaKnown RBP30.48■■■□□ 2.47
TDP1-205ENST00000553527 STYK1Q6J9G0 422 aa30.48■■■□□ 2.47
TDP1-205ENST00000553527 PPP1R42Q7Z4L9 355 aa30.48■■■□□ 2.47
TDP1-205ENST00000553527 CNKSR1Q969H4 720 aa30.48■■■□□ 2.47
TDP1-205ENST00000553527 SBF1O95248 1867 aa30.47■■■□□ 2.47
TDP1-205ENST00000553527 ANKRD36CQ5JPF3 1778 aa30.47■■■□□ 2.47
TDP1-205ENST00000553527 C9orf131Q5VYM1 1079 aa30.47■■■□□ 2.47
TDP1-205ENST00000553527 ANKRD13DQ6ZTN6 518 aa30.47■■■□□ 2.47
TDP1-205ENST00000553527 CCDC88AQ3V6T2 1871 aa30.46■■■□□ 2.47
TDP1-205ENST00000553527 ABCC12Q96J65 1359 aa30.46■■■□□ 2.47
TDP1-205ENST00000553527 RASSF7Q02833 373 aa30.46■■■□□ 2.47
TDP1-205ENST00000553527 PARP10Q53GL7 1025 aa30.46■■■□□ 2.47
TDP1-205ENST00000553527 HSP90AB3PQ58FF7 597 aa30.46■■■□□ 2.47
TDP1-205ENST00000553527 IL16Q14005 1332 aa30.46■■■□□ 2.47
TDP1-205ENST00000553527 TCERG1O14776 1098 aaKnown RBP30.45■■■□□ 2.47
TDP1-205ENST00000553527 NPR1P16066 1061 aa30.45■■■□□ 2.47
TDP1-205ENST00000553527 TCIRG1Q13488 830 aa30.45■■■□□ 2.47
TDP1-205ENST00000553527 WDR63Q8IWG1 891 aa30.45■■■□□ 2.47
TDP1-205ENST00000553527 PLBD2Q8NHP8 589 aa30.45■■■□□ 2.47
TDP1-205ENST00000553527 UTP14AQ9BVJ6 771 aaKnown RBP30.45■■■□□ 2.47
TDP1-205ENST00000553527 PHAXQ9H814 394 aaKnown RBP30.45■■■□□ 2.47
TDP1-205ENST00000553527 NTSR2O95665 410 aa30.44■■■□□ 2.46
TDP1-205ENST00000553527 CCDC30Q5VVM6 783 aa30.44■■■□□ 2.46
TDP1-205ENST00000553527 PRPF40BQ6NWY9 871 aaKnown RBP30.44■■■□□ 2.46
TDP1-205ENST00000553527 ADCY9O60503 1353 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms