RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 PIM2Q9P1W9 311 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 KCNA3P22001 575 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 PDE6BP35913 854 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 ST5P78524 1137 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 HDGFL1Q5TGJ6 251 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 PRR5LQ6MZQ0 368 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
PCNX1-204ENST00000553428 WDR63Q8IWG1 891 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 CNBD1Q8NA66 436 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 DBF4Q9UBU7 674 aaPredicted RBP10.74□□□□□ -0.69
PCNX1-204ENST00000553428 NIP7Q9Y221 180 aaKnown RBP eCLIP10.74□□□□□ -0.69
PCNX1-204ENST00000553428 NRXN2Q9P2S2 1712 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 ATP10DQ9P241 1426 aa10.74□□□□□ -0.69
PCNX1-204ENST00000553428 CCER2I3L3R5 266 aa10.73□□□□□ -0.69
PCNX1-204ENST00000553428 NPHP1O15259 732 aa10.73□□□□□ -0.69
PCNX1-204ENST00000553428 KRT24Q2M2I5 525 aa10.73□□□□□ -0.69
PCNX1-204ENST00000553428 TPTE2Q6XPS3 522 aa10.73□□□□□ -0.69
PCNX1-204ENST00000553428 TTLL7Q6ZT98 887 aa10.73□□□□□ -0.69
PCNX1-204ENST00000553428 NBPF5PQ86XG9 351 aaPredicted RBP10.73□□□□□ -0.69
PCNX1-204ENST00000553428 FAM9BQ8IZU0 186 aa10.73□□□□□ -0.69
PCNX1-204ENST00000553428 NYXQ9GZU5 481 aa10.73□□□□□ -0.69
PCNX1-204ENST00000553428 BCS1LQ9Y276 419 aa10.73□□□□□ -0.69
PCNX1-204ENST00000553428 IBTKQ9P2D0 1353 aaPredicted RBP10.73□□□□□ -0.69
PCNX1-204ENST00000553428 BCORQ6W2J9 1755 aa10.72□□□□□ -0.69
PCNX1-204ENST00000553428 H0YIN7 160 aa10.72□□□□□ -0.69
PCNX1-204ENST00000553428 HLFQ16534 295 aa10.72□□□□□ -0.69
PCNX1-204ENST00000553428 PARP10Q53GL7 1025 aa10.72□□□□□ -0.69
PCNX1-204ENST00000553428 HSP90AB3PQ58FF7 597 aa10.72□□□□□ -0.69
PCNX1-204ENST00000553428 DALRD3Q5D0E6 543 aaKnown RBP10.72□□□□□ -0.69
PCNX1-204ENST00000553428 HYPKQ9NX55 129 aa10.72□□□□□ -0.69
PCNX1-204ENST00000553428 CHRNA5P30532 468 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 PROSER3Q2NL68 480 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 COPS6Q7L5N1 327 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 C2CD5Q86YS7 1000 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 ZNF34Q8IZ26 560 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 TTLL6Q8N841 843 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 XAGE3Q8WTP9 111 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 NECTIN2Q92692 538 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 ZBTB3Q9H5J0 574 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 CHPF2Q9P2E5 772 aa10.71□□□□□ -0.69
PCNX1-204ENST00000553428 KIAA1551Q9HCM1 1747 aa10.7□□□□□ -0.7
PCNX1-204ENST00000553428 RNF123Q5XPI4 1314 aa10.7□□□□□ -0.7
PCNX1-204ENST00000553428 KLRG2A4D1S0 409 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-204ENST00000553428 CCDC30Q5VVM6 783 aa10.7□□□□□ -0.7
PCNX1-204ENST00000553428 PPP1R42Q7Z4L9 355 aa10.7□□□□□ -0.7
PCNX1-204ENST00000553428 PLBD2Q8NHP8 589 aa10.7□□□□□ -0.7
PCNX1-204ENST00000553428 ANXA1P04083 346 aa10.69□□□□□ -0.7
PCNX1-204ENST00000553428 GTF2E1P29083 439 aaPredicted RBP10.69□□□□□ -0.7
PCNX1-204ENST00000553428 AIMP1Q12904 312 aaKnown RBP10.69□□□□□ -0.7
PCNX1-204ENST00000553428 STYK1Q6J9G0 422 aa10.69□□□□□ -0.7
PCNX1-204ENST00000553428 C8orf58Q8NAV2 365 aa10.69□□□□□ -0.7
PCNX1-204ENST00000553428 CNKSR1Q969H4 720 aa10.69□□□□□ -0.7
PCNX1-204ENST00000553428 MASTLQ96GX5 879 aa10.69□□□□□ -0.7
PCNX1-204ENST00000553428 WWC3Q9ULE0 1092 aa10.69□□□□□ -0.7
PCNX1-204ENST00000553428 RIC1Q4ADV7 1423 aa10.68□□□□□ -0.7
PCNX1-204ENST00000553428 ELL2O00472 640 aaPredicted RBP10.68□□□□□ -0.7
PCNX1-204ENST00000553428 SRGNP10124 158 aa10.68□□□□□ -0.7
PCNX1-204ENST00000553428 TCIRG1Q13488 830 aa10.68□□□□□ -0.7
PCNX1-204ENST00000553428 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
PCNX1-204ENST00000553428 TSR2Q969E8 191 aaKnown RBP10.68□□□□□ -0.7
PCNX1-204ENST00000553428 MYH16Q9H6N6 1097 aa10.68□□□□□ -0.7
PCNX1-204ENST00000553428 AFDNP55196 1824 aaKnown RBP10.68□□□□□ -0.7
PCNX1-204ENST00000553428 UBN2Q6ZU65 1347 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 FANCIQ9NVI1 1328 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 NTSR2O95665 410 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 NPR1P16066 1061 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 GPTP24298 496 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 TWISTNBQ3B726 338 aaPredicted RBP10.67□□□□□ -0.7
PCNX1-204ENST00000553428 SOGA3Q5TF21 947 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 SUSD4Q5VX71 490 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 ARHGAP27Q6ZUM4 889 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 TSPYL6Q8N831 410 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.7
PCNX1-204ENST00000553428 UTP14AQ9BVJ6 771 aaKnown RBP10.67□□□□□ -0.7
PCNX1-204ENST00000553428 STK31Q9BXU1 1019 aa10.67□□□□□ -0.7
PCNX1-204ENST00000553428 N4BP2Q86UW6 1770 aaPredicted RBP10.67□□□□□ -0.7
PCNX1-204ENST00000553428 ZNF521Q96K83 1311 aa10.66□□□□□ -0.7
PCNX1-204ENST00000553428 FAM177BA6PVY3 158 aa10.66□□□□□ -0.7
PCNX1-204ENST00000553428 DDX58O95786 925 aaKnown RBP10.66□□□□□ -0.7
PCNX1-204ENST00000553428 ALDH1B1P30837 517 aa10.66□□□□□ -0.7
PCNX1-204ENST00000553428 TRIM28Q13263 835 aaKnown RBP10.66□□□□□ -0.7
PCNX1-204ENST00000553428 CRY2Q49AN0 593 aa10.66□□□□□ -0.7
PCNX1-204ENST00000553428 SLC10A5Q5PT55 438 aa10.66□□□□□ -0.7
PCNX1-204ENST00000553428 DIEXFQ68CQ4 756 aaKnown RBP10.66□□□□□ -0.7
PCNX1-204ENST00000553428 CCDC24Q8N4L8 307 aa10.66□□□□□ -0.7
PCNX1-204ENST00000553428 ZNF784Q8NCA9 323 aaPredicted RBP10.66□□□□□ -0.7
PCNX1-204ENST00000553428 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
PCNX1-204ENST00000553428 CHD4Q14839 1912 aa10.65□□□□□ -0.7
PCNX1-204ENST00000553428 ERFEQ4G0M1 354 aa10.65□□□□□ -0.7
PCNX1-204ENST00000553428 RIC3Q7Z5B4 369 aa10.65□□□□□ -0.7
PCNX1-204ENST00000553428 NLRP10Q86W26 655 aa10.65□□□□□ -0.7
PCNX1-204ENST00000553428 NUTM1Q86Y26 1132 aa10.65□□□□□ -0.7
PCNX1-204ENST00000553428 ISCA1Q9BUE6 129 aa10.65□□□□□ -0.7
PCNX1-204ENST00000553428 BRCA1P38398 1863 aaKnown RBP10.65□□□□□ -0.7
PCNX1-204ENST00000553428 ADCY9O60503 1353 aa10.65□□□□□ -0.71
PCNX1-204ENST00000553428 SENP3-EIF4A1A0A087X0R7 540 aa10.64□□□□□ -0.71
PCNX1-204ENST00000553428 VAMP4O75379 141 aa10.64□□□□□ -0.71
PCNX1-204ENST00000553428 HSP90B1P14625 803 aaKnown RBP10.64□□□□□ -0.71
PCNX1-204ENST00000553428 PRPF40BQ6NWY9 871 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms