RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 EIF2S2P20042 333 aaKnown RBP13.34□□□□□ -0.27
LINC00517-201ENST00000553396 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
LINC00517-201ENST00000553396 BABAM1Q9NWV8 329 aa13.34□□□□□ -0.27
LINC00517-201ENST00000553396 ANKRD31Q8N7Z5 1873 aa13.33□□□□□ -0.27
LINC00517-201ENST00000553396 CHL1O00533 1208 aa13.33□□□□□ -0.28
LINC00517-201ENST00000553396 MYL6BP14649 208 aa13.33□□□□□ -0.28
LINC00517-201ENST00000553396 CHRNA5P30532 468 aa13.33□□□□□ -0.28
LINC00517-201ENST00000553396 BCS1LQ9Y276 419 aa13.33□□□□□ -0.28
LINC00517-201ENST00000553396 NUP98P52948 1817 aa13.33□□□□□ -0.28
LINC00517-201ENST00000553396 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
LINC00517-201ENST00000553396 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
LINC00517-201ENST00000553396 CCDC24Q8N4L8 307 aa13.32□□□□□ -0.28
LINC00517-201ENST00000553396 NECTIN2Q92692 538 aa13.32□□□□□ -0.28
LINC00517-201ENST00000553396 SETDB2Q96T68 719 aa13.32□□□□□ -0.28
LINC00517-201ENST00000553396 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
LINC00517-201ENST00000553396 NPHP1O15259 732 aa13.31□□□□□ -0.28
LINC00517-201ENST00000553396 ANXA1P04083 346 aa13.31□□□□□ -0.28
LINC00517-201ENST00000553396 TTLL7Q6ZT98 887 aa13.31□□□□□ -0.28
LINC00517-201ENST00000553396 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
LINC00517-201ENST00000553396 COL11A2P13942 1736 aaPredicted RBP13.3□□□□□ -0.28
LINC00517-201ENST00000553396 CACNA1SQ13698 1873 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 ABCB7O75027 752 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 KCNA3P22001 575 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 HLFQ16534 295 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 PRR5LQ6MZQ0 368 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 CNBD1Q8NA66 436 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 MBIPQ9NS73 344 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 PIM2Q9P1W9 311 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
LINC00517-201ENST00000553396 FAM177BA6PVY3 158 aa13.29□□□□□ -0.28
LINC00517-201ENST00000553396 CLEC4GQ6UXB4 293 aa13.29□□□□□ -0.28
LINC00517-201ENST00000553396 KIF6Q6ZMV9 814 aa13.29□□□□□ -0.28
LINC00517-201ENST00000553396 ZBTB3Q9H5J0 574 aa13.29□□□□□ -0.28
LINC00517-201ENST00000553396 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00517-201ENST00000553396 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
LINC00517-201ENST00000553396 PDIA6Q15084 440 aa13.28□□□□□ -0.28
LINC00517-201ENST00000553396 DALRD3Q5D0E6 543 aaKnown RBP13.28□□□□□ -0.28
LINC00517-201ENST00000553396 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
LINC00517-201ENST00000553396 C2CD5Q86YS7 1000 aa13.28□□□□□ -0.28
LINC00517-201ENST00000553396 FAM9BQ8IZU0 186 aa13.28□□□□□ -0.28
LINC00517-201ENST00000553396 IFT57Q9NWB7 429 aa13.28□□□□□ -0.28
LINC00517-201ENST00000553396 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
LINC00517-201ENST00000553396 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
LINC00517-201ENST00000553396 GNAI1P63096 354 aa13.27□□□□□ -0.29
LINC00517-201ENST00000553396 ST5P78524 1137 aa13.27□□□□□ -0.29
LINC00517-201ENST00000553396 ZNF784Q8NCA9 323 aaPredicted RBP13.27□□□□□ -0.29
LINC00517-201ENST00000553396 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.29
LINC00517-201ENST00000553396 ERVV-1B6SEH8 477 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 H0YIN7 160 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 GPTP24298 496 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
LINC00517-201ENST00000553396 ANKRD36CQ5JPF3 1778 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 ARHGAP27Q6ZUM4 889 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 LRP10Q7Z4F1 713 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 CHPF2Q9P2E5 772 aa13.26□□□□□ -0.29
LINC00517-201ENST00000553396 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
LINC00517-201ENST00000553396 ELL2O00472 640 aaPredicted RBP13.25□□□□□ -0.29
LINC00517-201ENST00000553396 RGL2O15211 777 aa13.25□□□□□ -0.29
LINC00517-201ENST00000553396 PDE6BP35913 854 aa13.25□□□□□ -0.29
LINC00517-201ENST00000553396 WWC1Q8IX03 1113 aa13.25□□□□□ -0.29
LINC00517-201ENST00000553396 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
LINC00517-201ENST00000553396 TNRC6CQ9HCJ0 1690 aaKnown RBP13.24□□□□□ -0.29
LINC00517-201ENST00000553396 HOXB7P09629 217 aa13.24□□□□□ -0.29
LINC00517-201ENST00000553396 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
LINC00517-201ENST00000553396 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
LINC00517-201ENST00000553396 COPS6Q7L5N1 327 aa13.24□□□□□ -0.29
LINC00517-201ENST00000553396 TSR2Q969E8 191 aaKnown RBP13.24□□□□□ -0.29
LINC00517-201ENST00000553396 ZNF622Q969S3 477 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC00517-201ENST00000553396 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC00517-201ENST00000553396 UBN2Q6ZU65 1347 aa13.23□□□□□ -0.29
LINC00517-201ENST00000553396 GTF2E1P29083 439 aaPredicted RBP13.23□□□□□ -0.29
LINC00517-201ENST00000553396 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
LINC00517-201ENST00000553396 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
LINC00517-201ENST00000553396 SBF1O95248 1867 aa13.23□□□□□ -0.29
LINC00517-201ENST00000553396 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
LINC00517-201ENST00000553396 ARFGEF2Q9Y6D5 1785 aa13.22□□□□□ -0.29
LINC00517-201ENST00000553396 ABCC12Q96J65 1359 aa13.22□□□□□ -0.29
LINC00517-201ENST00000553396 GIGYF2Q6Y7W6 1299 aaKnown RBP13.22□□□□□ -0.29
LINC00517-201ENST00000553396 C8orf58Q8NAV2 365 aa13.22□□□□□ -0.29
LINC00517-201ENST00000553396 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
LINC00517-201ENST00000553396 CCDC88AQ3V6T2 1871 aa13.22□□□□□ -0.29
LINC00517-201ENST00000553396 ADCY9O60503 1353 aa13.21□□□□□ -0.29
LINC00517-201ENST00000553396 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
LINC00517-201ENST00000553396 SUSD4Q5VX71 490 aa13.21□□□□□ -0.29
LINC00517-201ENST00000553396 ZNF34Q8IZ26 560 aa13.21□□□□□ -0.29
LINC00517-201ENST00000553396 ZNF526Q8TF50 670 aaPredicted RBP13.21□□□□□ -0.29
LINC00517-201ENST00000553396 NYXQ9GZU5 481 aa13.21□□□□□ -0.29
LINC00517-201ENST00000553396 PDZRN3Q9UPQ7 1066 aa13.21□□□□□ -0.29
LINC00517-201ENST00000553396 SRGNP10124 158 aa13.2□□□□□ -0.3
LINC00517-201ENST00000553396 RASSF7Q02833 373 aa13.2□□□□□ -0.3
LINC00517-201ENST00000553396 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
LINC00517-201ENST00000553396 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
LINC00517-201ENST00000553396 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
LINC00517-201ENST00000553396 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
LINC00517-201ENST00000553396 NTSR2O95665 410 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms