RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
HNRNPC-205ENST00000553300 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
HNRNPC-205ENST00000553300 KIF6Q6ZMV9 814 aa17.17■□□□□ 0.34
HNRNPC-205ENST00000553300 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
HNRNPC-205ENST00000553300 APAF1O14727 1248 aa17.16■□□□□ 0.34
HNRNPC-205ENST00000553300 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
HNRNPC-205ENST00000553300 TTLL6Q8N841 843 aa17.16■□□□□ 0.34
HNRNPC-205ENST00000553300 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
HNRNPC-205ENST00000553300 NIP7Q9Y221 180 aaKnown RBP eCLIP17.16■□□□□ 0.34
HNRNPC-205ENST00000553300 MYL6BP14649 208 aa17.15■□□□□ 0.34
HNRNPC-205ENST00000553300 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
HNRNPC-205ENST00000553300 ADCY9O60503 1353 aa17.15■□□□□ 0.34
HNRNPC-205ENST00000553300 MAP3K15Q6ZN16 1313 aa17.15■□□□□ 0.34
HNRNPC-205ENST00000553300 HOXB7P09629 217 aa17.15■□□□□ 0.34
HNRNPC-205ENST00000553300 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
HNRNPC-205ENST00000553300 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
HNRNPC-205ENST00000553300 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
HNRNPC-205ENST00000553300 HLFQ16534 295 aa17.14■□□□□ 0.33
HNRNPC-205ENST00000553300 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
HNRNPC-205ENST00000553300 GNAI1P63096 354 aa17.13■□□□□ 0.33
HNRNPC-205ENST00000553300 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
HNRNPC-205ENST00000553300 GPBP1L1Q9HC44 474 aaPredicted RBP17.13■□□□□ 0.33
HNRNPC-205ENST00000553300 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
HNRNPC-205ENST00000553300 PDIA6Q15084 440 aa17.12■□□□□ 0.33
HNRNPC-205ENST00000553300 TTLL7Q6ZT98 887 aa17.12■□□□□ 0.33
HNRNPC-205ENST00000553300 CNKSR1Q969H4 720 aa17.12■□□□□ 0.33
HNRNPC-205ENST00000553300 ZNF622Q969S3 477 aaKnown RBP eCLIP17.12■□□□□ 0.331e-21■□□□□ 9
HNRNPC-205ENST00000553300 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
HNRNPC-205ENST00000553300 IFT57Q9NWB7 429 aa17.12■□□□□ 0.33
HNRNPC-205ENST00000553300 NUP98P52948 1817 aa17.11■□□□□ 0.33
HNRNPC-205ENST00000553300 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
HNRNPC-205ENST00000553300 GTF2E1P29083 439 aaPredicted RBP17.11■□□□□ 0.33
HNRNPC-205ENST00000553300 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
HNRNPC-205ENST00000553300 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
HNRNPC-205ENST00000553300 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
HNRNPC-205ENST00000553300 GIGYF2Q6Y7W6 1299 aaKnown RBP17.11■□□□□ 0.33
HNRNPC-205ENST00000553300 MASTLQ96GX5 879 aa17.11■□□□□ 0.33
HNRNPC-205ENST00000553300 KLRG2A4D1S0 409 aaPredicted RBP17.1■□□□□ 0.33
HNRNPC-205ENST00000553300 SRGNP10124 158 aa17.1■□□□□ 0.33
HNRNPC-205ENST00000553300 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
HNRNPC-205ENST00000553300 CCDC24Q8N4L8 307 aa17.1■□□□□ 0.33
HNRNPC-205ENST00000553300 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
HNRNPC-205ENST00000553300 ZBTB3Q9H5J0 574 aa17.1■□□□□ 0.33
HNRNPC-205ENST00000553300 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
HNRNPC-205ENST00000553300 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
HNRNPC-205ENST00000553300 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
HNRNPC-205ENST00000553300 NPR1P16066 1061 aa17.08■□□□□ 0.32
HNRNPC-205ENST00000553300 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
HNRNPC-205ENST00000553300 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.32
HNRNPC-205ENST00000553300 SOGA3Q5TF21 947 aa17.08■□□□□ 0.32
HNRNPC-205ENST00000553300 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.32
HNRNPC-205ENST00000553300 C9orf131Q5VYM1 1079 aa17.08■□□□□ 0.32
HNRNPC-205ENST00000553300 ZNF34Q8IZ26 560 aa17.08■□□□□ 0.32
HNRNPC-205ENST00000553300 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.32
HNRNPC-205ENST00000553300 KRT24Q2M2I5 525 aa17.07■□□□□ 0.32
HNRNPC-205ENST00000553300 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
HNRNPC-205ENST00000553300 DUSP27Q5VZP5 1158 aa17.07■□□□□ 0.32
HNRNPC-205ENST00000553300 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
HNRNPC-205ENST00000553300 PPP1R42Q7Z4L9 355 aa17.07■□□□□ 0.32
HNRNPC-205ENST00000553300 DBF4Q9UBU7 674 aaPredicted RBP17.07■□□□□ 0.32
HNRNPC-205ENST00000553300 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
HNRNPC-205ENST00000553300 C1QTNF8P60827 252 aa17.06■□□□□ 0.32
HNRNPC-205ENST00000553300 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
HNRNPC-205ENST00000553300 RNF181Q9P0P0 153 aa17.06■□□□□ 0.32
HNRNPC-205ENST00000553300 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
HNRNPC-205ENST00000553300 ANXA1P04083 346 aa17.05■□□□□ 0.32
HNRNPC-205ENST00000553300 LMNB1P20700 586 aa17.05■□□□□ 0.32
HNRNPC-205ENST00000553300 ALDH1B1P30837 517 aa17.05■□□□□ 0.32
HNRNPC-205ENST00000553300 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
HNRNPC-205ENST00000553300 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
HNRNPC-205ENST00000553300 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
HNRNPC-205ENST00000553300 SBF1O95248 1867 aa17.05■□□□□ 0.32
HNRNPC-205ENST00000553300 COL11A2P13942 1736 aaPredicted RBP17.05■□□□□ 0.32
HNRNPC-205ENST00000553300 C21orf2O43822 256 aa17.04■□□□□ 0.32
HNRNPC-205ENST00000553300 GPTP24298 496 aa17.04■□□□□ 0.32
HNRNPC-205ENST00000553300 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
HNRNPC-205ENST00000553300 PRPF40BQ6NWY9 871 aaKnown RBP17.04■□□□□ 0.32
HNRNPC-205ENST00000553300 ZNF526Q8TF50 670 aaPredicted RBP17.04■□□□□ 0.32
HNRNPC-205ENST00000553300 RNF123Q5XPI4 1314 aa17.04■□□□□ 0.32
HNRNPC-205ENST00000553300 SUSD4Q5VX71 490 aa17.03■□□□□ 0.32
HNRNPC-205ENST00000553300 WWC1Q8IX03 1113 aa17.03■□□□□ 0.32
HNRNPC-205ENST00000553300 UBN2Q6ZU65 1347 aa17.03■□□□□ 0.32
HNRNPC-205ENST00000553300 RIC1Q4ADV7 1423 aa17.03■□□□□ 0.32
HNRNPC-205ENST00000553300 TCIRG1Q13488 830 aa17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 IL16Q14005 1332 aa17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 CRY2Q49AN0 593 aa17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 ERFEQ4G0M1 354 aa17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 NUTM1Q86Y26 1132 aa17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
HNRNPC-205ENST00000553300 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.31
HNRNPC-205ENST00000553300 LTBP3Q9NS15 1303 aa17.02■□□□□ 0.31
HNRNPC-205ENST00000553300 NFKBIEO00221 500 aa17.02■□□□□ 0.31
HNRNPC-205ENST00000553300 NTSR2O95665 410 aa17.02■□□□□ 0.31
HNRNPC-205ENST00000553300 SLX4Q8IY92 1834 aa17.01■□□□□ 0.31
HNRNPC-205ENST00000553300 RASSF7Q02833 373 aa17.01■□□□□ 0.31
HNRNPC-205ENST00000553300 SLC10A5Q5PT55 438 aa17.01■□□□□ 0.31
HNRNPC-205ENST00000553300 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms