RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 E2F7Q96AV8 911 aa10.6□□□□□ -0.71
GNPTAB-210ENST00000552681 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
GNPTAB-210ENST00000552681 CENPOQ9BU64 300 aa10.6□□□□□ -0.71
GNPTAB-210ENST00000552681 DNAJC25Q9H1X3 360 aa10.6□□□□□ -0.71
GNPTAB-210ENST00000552681 RIMBP3CA6NJZ7 1639 aa10.6□□□□□ -0.71
GNPTAB-210ENST00000552681 RIMBP3BA6NNM3 1639 aa10.6□□□□□ -0.71
GNPTAB-210ENST00000552681 RIMBP3Q9UFD9 1639 aa10.6□□□□□ -0.71
GNPTAB-210ENST00000552681 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 CDC45O75419 566 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 ARHGAP4P98171 946 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 KSR2Q6VAB6 950 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 DEPDC4Q8N2C3 294 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 TEX19Q8NA77 164 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 A6NJY4 79 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L15C9J2P7 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L10C9JJH3 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L13C9JLJ4 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L12C9JPN9 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L11C9JVI0 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L21D6R901 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L18D6R9N7 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L22D6RA61 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L17D6RBQ6 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L19D6RCP7 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L20D6RJB6 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 ICMTO60725 284 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 USP17L24Q0WX57 530 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 CCDC47Q96A33 483 aaKnown RBP10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 ABCF2Q9UG63 623 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
GNPTAB-210ENST00000552681 MTA2O94776 668 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 RASA1P20936 1047 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 ATICP31939 592 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 RELL1Q8IUW5 271 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 RGL4Q8IZJ4 473 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 DDX12PQ92771 950 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 SLKQ9H2G2 1235 aaPredicted RBP10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 VTI1BQ9UEU0 232 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 RABGAP1Q9Y3P9 1069 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 SCGB1D2O95969 90 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 MYL3P08590 195 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 EXOSC10Q01780 885 aaKnown RBP10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 ACBD5Q5T8D3 534 aaPredicted RBP10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 ERAP2Q6P179 960 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 NBPF10Q6P3W6 841 aaKnown RBP10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 RELTQ969Z4 430 aa10.58□□□□□ -0.72
GNPTAB-210ENST00000552681 ALDH1L1O75891 902 aa10.57□□□□□ -0.72
GNPTAB-210ENST00000552681 ATF3P18847 181 aa10.57□□□□□ -0.72
GNPTAB-210ENST00000552681 GEMIN4P57678 1058 aaKnown RBP10.57□□□□□ -0.72
GNPTAB-210ENST00000552681 SLC4A10Q6U841 1118 aa10.57□□□□□ -0.72
GNPTAB-210ENST00000552681 HDGFL2Q7Z4V5 671 aaPredicted RBP10.57□□□□□ -0.72
GNPTAB-210ENST00000552681 DUSP9Q99956 384 aaKnown RBP10.57□□□□□ -0.72
GNPTAB-210ENST00000552681 ABCC8Q09428 1581 aa10.57□□□□□ -0.72
GNPTAB-210ENST00000552681 NAT2P11245 290 aa10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 CLK1P49759 484 aaKnown RBP10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 NFX1Q12986 1120 aaKnown RBP10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 COL19A1Q14993 1142 aa10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 IP6K2Q9UHH9 426 aa10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 EMILIN1Q9Y6C2 1016 aa10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 SORBS3O60504 671 aa10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 CHMP4BP1P59074 171 aa10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 CCDC70Q6NSX1 233 aa10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 PPP2R3BQ9Y5P8 575 aa10.56□□□□□ -0.72
GNPTAB-210ENST00000552681 CCDC85CA6NKD9 419 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 NR1I2O75469 434 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 MASP1P48740 699 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 SH3TC2Q8TF17 1288 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 CD248Q9HCU0 757 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 DAAM1Q9Y4D1 1078 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 SHTN1A0MZ66 631 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 USP17L3A6NCW0 530 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 USP17L4A6NCW7 530 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 RAPGEF3O95398 923 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 LMBRD2Q68DH5 695 aaPredicted RBP10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 USP17L2Q6R6M4 530 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 ANKRD13DQ6ZTN6 518 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 USP17L1Q7RTZ2 530 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
GNPTAB-210ENST00000552681 SYNRGQ9UMZ2 1314 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 HMMRO75330 724 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 WASHC5Q12768 1159 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 EPS8L1Q8TE68 723 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 PCDHB15Q9Y5E8 787 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 FAM221BA6H8Z2 402 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 IFNL3Q8IZI9 196 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 CERKQ8TCT0 537 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 KMT5AQ9NQR1 393 aa10.54□□□□□ -0.72
GNPTAB-210ENST00000552681 ESYT3A0FGR9 886 aa10.53□□□□□ -0.72
GNPTAB-210ENST00000552681 SEPT2Q15019 361 aa10.53□□□□□ -0.72
GNPTAB-210ENST00000552681 NELL1Q92832 810 aa10.53□□□□□ -0.72
GNPTAB-210ENST00000552681 SETDB2Q96T68 719 aa10.53□□□□□ -0.72
GNPTAB-210ENST00000552681 CNTN3Q9P232 1028 aa10.53□□□□□ -0.72
GNPTAB-210ENST00000552681 CLEC11AQ9Y240 323 aa10.53□□□□□ -0.72
GNPTAB-210ENST00000552681 FAM196BA6NMK8 535 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms