RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
CCDC59-207ENST00000552606 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
CCDC59-207ENST00000552606 CANXP27824 592 aaKnown RBP11.84□□□□□ -0.51
CCDC59-207ENST00000552606 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
CCDC59-207ENST00000552606 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
CCDC59-207ENST00000552606 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
CCDC59-207ENST00000552606 PDIA6Q15084 440 aa11.84□□□□□ -0.51
CCDC59-207ENST00000552606 TRMT2AQ8IZ69 625 aaKnown RBP11.84□□□□□ -0.51
CCDC59-207ENST00000552606 SLC16A10Q8TF71 515 aa11.84□□□□□ -0.51
CCDC59-207ENST00000552606 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
CCDC59-207ENST00000552606 COL11A2P13942 1736 aaPredicted RBP11.83□□□□□ -0.52
CCDC59-207ENST00000552606 E9PSI1 815 aa11.83□□□□□ -0.52
CCDC59-207ENST00000552606 PTGER2P43116 358 aa11.83□□□□□ -0.52
CCDC59-207ENST00000552606 PROSER3Q2NL68 480 aa11.83□□□□□ -0.52
CCDC59-207ENST00000552606 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
CCDC59-207ENST00000552606 MTFR1LQ9H019 292 aa11.83□□□□□ -0.52
CCDC59-207ENST00000552606 MYH16Q9H6N6 1097 aa11.83□□□□□ -0.52
CCDC59-207ENST00000552606 ZBTB7AO95365 584 aa11.82□□□□□ -0.52
CCDC59-207ENST00000552606 TRAPPC3LQ5T215 181 aa11.82□□□□□ -0.52
CCDC59-207ENST00000552606 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
CCDC59-207ENST00000552606 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
CCDC59-207ENST00000552606 SRP68Q9UHB9 627 aaKnown RBP11.82□□□□□ -0.52
CCDC59-207ENST00000552606 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
CCDC59-207ENST00000552606 TNRC6CQ9HCJ0 1690 aaKnown RBP11.81□□□□□ -0.52
CCDC59-207ENST00000552606 CACNA1SQ13698 1873 aa11.81□□□□□ -0.52
CCDC59-207ENST00000552606 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
CCDC59-207ENST00000552606 CAMTA2O94983 1202 aa11.81□□□□□ -0.52
CCDC59-207ENST00000552606 GYS1P13807 737 aa11.81□□□□□ -0.52
CCDC59-207ENST00000552606 EIF2S2P20042 333 aaKnown RBP11.81□□□□□ -0.52
CCDC59-207ENST00000552606 EXOSC9Q06265 439 aaKnown RBP11.81□□□□□ -0.52
CCDC59-207ENST00000552606 TWISTNBQ3B726 338 aaPredicted RBP11.81□□□□□ -0.52
CCDC59-207ENST00000552606 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
CCDC59-207ENST00000552606 NARFQ9UHQ1 456 aa11.81□□□□□ -0.52
CCDC59-207ENST00000552606 ELL2O00472 640 aaPredicted RBP11.8□□□□□ -0.52
CCDC59-207ENST00000552606 ANXA1P04083 346 aa11.8□□□□□ -0.52
CCDC59-207ENST00000552606 RFC4P35249 363 aa11.8□□□□□ -0.52
CCDC59-207ENST00000552606 MSL1Q68DK7 614 aa11.8□□□□□ -0.52
CCDC59-207ENST00000552606 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
CCDC59-207ENST00000552606 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCDC59-207ENST00000552606 MYH3P11055 1940 aa11.8□□□□□ -0.52
CCDC59-207ENST00000552606 C10orf71Q711Q0 1435 aa11.79□□□□□ -0.52
CCDC59-207ENST00000552606 A0A087WZG4 1122 aa11.79□□□□□ -0.52
CCDC59-207ENST00000552606 VAMP4O75379 141 aa11.79□□□□□ -0.52
CCDC59-207ENST00000552606 MYL6BP14649 208 aa11.79□□□□□ -0.52
CCDC59-207ENST00000552606 USPL1Q5W0Q7 1092 aa11.79□□□□□ -0.52
CCDC59-207ENST00000552606 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
CCDC59-207ENST00000552606 SPON1Q9HCB6 807 aa11.79□□□□□ -0.52
CCDC59-207ENST00000552606 DBF4Q9UBU7 674 aaPredicted RBP11.79□□□□□ -0.52
CCDC59-207ENST00000552606 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
CCDC59-207ENST00000552606 RGL2O15211 777 aa11.78□□□□□ -0.52
CCDC59-207ENST00000552606 FKBP8Q14318 412 aa11.78□□□□□ -0.52
CCDC59-207ENST00000552606 TTLL7Q6ZT98 887 aa11.78□□□□□ -0.52
CCDC59-207ENST00000552606 TBC1D2BQ9UPU7 963 aa11.78□□□□□ -0.52
CCDC59-207ENST00000552606 MAP3K15Q6ZN16 1313 aa11.78□□□□□ -0.52
CCDC59-207ENST00000552606 ARFGEF1Q9Y6D6 1849 aa11.77□□□□□ -0.52
CCDC59-207ENST00000552606 CCDC30Q5VVM6 783 aa11.77□□□□□ -0.53
CCDC59-207ENST00000552606 ZPR1O75312 459 aa11.76□□□□□ -0.53
CCDC59-207ENST00000552606 DDR1Q08345 913 aa11.76□□□□□ -0.53
CCDC59-207ENST00000552606 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
CCDC59-207ENST00000552606 HYPKQ9NX55 129 aa11.76□□□□□ -0.53
CCDC59-207ENST00000552606 CARMIL3Q8ND23 1372 aa11.76□□□□□ -0.53
CCDC59-207ENST00000552606 SRCAPQ6ZRS2 3230 aa11.76□□□□□ -0.53
CCDC59-207ENST00000552606 ERVV-1B6SEH8 477 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
CCDC59-207ENST00000552606 MMP10P09238 476 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 TM4SF1P30408 202 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 NFIXQ14938 502 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 HLFQ16534 295 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 TBC1D9BQ66K14 1250 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 COPS6Q7L5N1 327 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 PHAXQ9H814 394 aaKnown RBP11.75□□□□□ -0.53
CCDC59-207ENST00000552606 ADCY9O60503 1353 aa11.75□□□□□ -0.53
CCDC59-207ENST00000552606 IBTKQ9P2D0 1353 aaPredicted RBP11.75□□□□□ -0.53
CCDC59-207ENST00000552606 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
CCDC59-207ENST00000552606 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
CCDC59-207ENST00000552606 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
CCDC59-207ENST00000552606 CHMP4AQ9BY43 222 aa11.74□□□□□ -0.53
CCDC59-207ENST00000552606 ZBTB3Q9H5J0 574 aa11.74□□□□□ -0.53
CCDC59-207ENST00000552606 UBN2Q6ZU65 1347 aa11.74□□□□□ -0.53
CCDC59-207ENST00000552606 RIC1Q4ADV7 1423 aa11.74□□□□□ -0.53
CCDC59-207ENST00000552606 PXDNLA1KZ92 1463 aa11.73□□□□□ -0.53
CCDC59-207ENST00000552606 CT47B1P0C2W7 299 aaPredicted RBP11.73□□□□□ -0.53
CCDC59-207ENST00000552606 ATXN8OSP0DMR3 200 aa11.73□□□□□ -0.53
CCDC59-207ENST00000552606 POLD1P28340 1107 aa11.73□□□□□ -0.53
CCDC59-207ENST00000552606 GIGYF2Q6Y7W6 1299 aaKnown RBP11.73□□□□□ -0.53
CCDC59-207ENST00000552606 G2E3Q7L622 706 aa11.73□□□□□ -0.53
CCDC59-207ENST00000552606 NPM2Q86SE8 214 aaKnown RBP11.73□□□□□ -0.53
CCDC59-207ENST00000552606 ZNF428Q96B54 188 aa11.73□□□□□ -0.53
CCDC59-207ENST00000552606 STK31Q9BXU1 1019 aa11.73□□□□□ -0.53
CCDC59-207ENST00000552606 ZNF652Q9Y2D9 606 aa11.73□□□□□ -0.53
CCDC59-207ENST00000552606 AIMP1Q12904 312 aaKnown RBP11.72□□□□□ -0.53
CCDC59-207ENST00000552606 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
CCDC59-207ENST00000552606 PLBD2Q8NHP8 589 aa11.72□□□□□ -0.53
CCDC59-207ENST00000552606 ARXQ96QS3 562 aa11.72□□□□□ -0.53
CCDC59-207ENST00000552606 TAF1P21675 1872 aa11.72□□□□□ -0.53
CCDC59-207ENST00000552606 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
CCDC59-207ENST00000552606 ABCC12Q96J65 1359 aa11.71□□□□□ -0.53
CCDC59-207ENST00000552606 FLIIQ13045 1269 aa11.71□□□□□ -0.53
CCDC59-207ENST00000552606 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms