RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 H0YIN7 160 aa18.38■□□□□ 0.53
DDX54-210ENST00000552375 TTLL6Q8N841 843 aa18.38■□□□□ 0.53
DDX54-210ENST00000552375 NPHP1O15259 732 aa18.37■□□□□ 0.53
DDX54-210ENST00000552375 PDE6BP35913 854 aa18.37■□□□□ 0.53
DDX54-210ENST00000552375 ST5P78524 1137 aa18.37■□□□□ 0.53
DDX54-210ENST00000552375 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
DDX54-210ENST00000552375 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
DDX54-210ENST00000552375 ERBB4Q15303 1308 aa18.36■□□□□ 0.53
DDX54-210ENST00000552375 CCDC24Q8N4L8 307 aa18.36■□□□□ 0.53
DDX54-210ENST00000552375 ANKRD31Q8N7Z5 1873 aa18.35■□□□□ 0.53
DDX54-210ENST00000552375 COL11A2P13942 1736 aaPredicted RBP18.35■□□□□ 0.53
DDX54-210ENST00000552375 NBPF5PQ86XG9 351 aaPredicted RBP18.35■□□□□ 0.53
DDX54-210ENST00000552375 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
DDX54-210ENST00000552375 NIP7Q9Y221 180 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDX54-210ENST00000552375 MAP3K15Q6ZN16 1313 aa18.33■□□□□ 0.53
DDX54-210ENST00000552375 RASSF7Q02833 373 aa18.33■□□□□ 0.52
DDX54-210ENST00000552375 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
DDX54-210ENST00000552375 APAF1O14727 1248 aa18.32■□□□□ 0.52
DDX54-210ENST00000552375 KIF3CO14782 793 aa18.32■□□□□ 0.52
DDX54-210ENST00000552375 HLFQ16534 295 aa18.32■□□□□ 0.52
DDX54-210ENST00000552375 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
DDX54-210ENST00000552375 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.52
DDX54-210ENST00000552375 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
DDX54-210ENST00000552375 ZC3H4Q9UPT8 1303 aaKnown RBP18.31■□□□□ 0.52
DDX54-210ENST00000552375 SRGNP10124 158 aa18.31■□□□□ 0.52
DDX54-210ENST00000552375 MYL6BP14649 208 aa18.31■□□□□ 0.52
DDX54-210ENST00000552375 STYK1Q6J9G0 422 aa18.31■□□□□ 0.52
DDX54-210ENST00000552375 TTLL7Q6ZT98 887 aa18.31■□□□□ 0.52
DDX54-210ENST00000552375 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
DDX54-210ENST00000552375 NFKBIEO00221 500 aa18.3■□□□□ 0.52
DDX54-210ENST00000552375 TPTE2Q6XPS3 522 aa18.3■□□□□ 0.52
DDX54-210ENST00000552375 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
DDX54-210ENST00000552375 IBTKQ9P2D0 1353 aaPredicted RBP18.3■□□□□ 0.52
DDX54-210ENST00000552375 CHL1O00533 1208 aa18.29■□□□□ 0.52
DDX54-210ENST00000552375 LMNB1P20700 586 aa18.29■□□□□ 0.52
DDX54-210ENST00000552375 LRP10Q7Z4F1 713 aa18.29■□□□□ 0.52
DDX54-210ENST00000552375 CNKSR1Q969H4 720 aa18.29■□□□□ 0.52
DDX54-210ENST00000552375 MASTLQ96GX5 879 aa18.29■□□□□ 0.52
DDX54-210ENST00000552375 KLRG2A4D1S0 409 aaPredicted RBP18.28■□□□□ 0.52
DDX54-210ENST00000552375 PDIA6Q15084 440 aa18.28■□□□□ 0.52
DDX54-210ENST00000552375 PRPF40BQ6NWY9 871 aaKnown RBP18.28■□□□□ 0.52
DDX54-210ENST00000552375 ZBTB3Q9H5J0 574 aa18.28■□□□□ 0.52
DDX54-210ENST00000552375 CEP350Q5VT06 3117 aa18.28■□□□□ 0.52
DDX54-210ENST00000552375 ABCC12Q96J65 1359 aa18.28■□□□□ 0.52
DDX54-210ENST00000552375 FAM177BA6PVY3 158 aa18.27■□□□□ 0.52
DDX54-210ENST00000552375 C21orf2O43822 256 aa18.27■□□□□ 0.52
DDX54-210ENST00000552375 EIF2S2P20042 333 aaKnown RBP18.27■□□□□ 0.52
DDX54-210ENST00000552375 PRELPP51888 382 aa18.27■□□□□ 0.52
DDX54-210ENST00000552375 FAM9BQ8IZU0 186 aa18.27■□□□□ 0.52
DDX54-210ENST00000552375 NYXQ9GZU5 481 aa18.27■□□□□ 0.52
DDX54-210ENST00000552375 NMRK2Q9NPI5 230 aa18.27■□□□□ 0.52
DDX54-210ENST00000552375 UBN2Q6ZU65 1347 aa18.26■□□□□ 0.51
DDX54-210ENST00000552375 KDM2BQ8NHM5 1336 aa18.26■□□□□ 0.51
DDX54-210ENST00000552375 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
DDX54-210ENST00000552375 NPR1P16066 1061 aa18.26■□□□□ 0.51
DDX54-210ENST00000552375 PROSER3Q2NL68 480 aa18.26■□□□□ 0.51
DDX54-210ENST00000552375 LTBP3Q9NS15 1303 aa18.25■□□□□ 0.51
DDX54-210ENST00000552375 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
DDX54-210ENST00000552375 SOGA3Q5TF21 947 aa18.25■□□□□ 0.51
DDX54-210ENST00000552375 GIGYF2Q6Y7W6 1299 aaKnown RBP18.25■□□□□ 0.51
DDX54-210ENST00000552375 ZNF219Q9P2Y4 722 aaPredicted RBP18.25■□□□□ 0.51
DDX54-210ENST00000552375 NUP98P52948 1817 aa18.25■□□□□ 0.51
DDX54-210ENST00000552375 ANXA1P04083 346 aa18.24■□□□□ 0.51
DDX54-210ENST00000552375 HOXB7P09629 217 aa18.24■□□□□ 0.51
DDX54-210ENST00000552375 GPTP24298 496 aa18.24■□□□□ 0.51
DDX54-210ENST00000552375 GTF2E1P29083 439 aaPredicted RBP18.24■□□□□ 0.51
DDX54-210ENST00000552375 CFAP44Q96MT7 982 aa18.24■□□□□ 0.51
DDX54-210ENST00000552375 TAOK3Q9H2K8 898 aa18.24■□□□□ 0.51
DDX54-210ENST00000552375 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
DDX54-210ENST00000552375 TNRC6CQ9HCJ0 1690 aaKnown RBP18.24■□□□□ 0.51
DDX54-210ENST00000552375 ARFGEF2Q9Y6D5 1785 aa18.24■□□□□ 0.51
DDX54-210ENST00000552375 CRY2Q49AN0 593 aa18.23■□□□□ 0.51
DDX54-210ENST00000552375 NUTM1Q86Y26 1132 aa18.23■□□□□ 0.51
DDX54-210ENST00000552375 ZNF34Q8IZ26 560 aa18.23■□□□□ 0.51
DDX54-210ENST00000552375 TOMM70O94826 608 aa18.22■□□□□ 0.51
DDX54-210ENST00000552375 NTSR2O95665 410 aa18.22■□□□□ 0.51
DDX54-210ENST00000552375 PARP10Q53GL7 1025 aa18.22■□□□□ 0.51
DDX54-210ENST00000552375 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
DDX54-210ENST00000552375 NECTIN2Q92692 538 aa18.22■□□□□ 0.51
DDX54-210ENST00000552375 TIAM2Q8IVF5 1701 aa18.22■□□□□ 0.51
DDX54-210ENST00000552375 SBF1O95248 1867 aa18.22■□□□□ 0.51
DDX54-210ENST00000552375 CACNA1SQ13698 1873 aa18.22■□□□□ 0.51
DDX54-210ENST00000552375 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 HSPA6P17066 643 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 CALD1Q05682 793 aaKnown RBP18.21■□□□□ 0.51
DDX54-210ENST00000552375 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 CCDC93Q567U6 631 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 HDGFL1Q5TGJ6 251 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 SUSD4Q5VX71 490 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 DDX21Q9NR30 783 aaKnown RBP eCLIP18.21■□□□□ 0.51
DDX54-210ENST00000552375 MBIPQ9NS73 344 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 IFT57Q9NWB7 429 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 ANKRD36CQ5JPF3 1778 aa18.21■□□□□ 0.51
DDX54-210ENST00000552375 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
DDX54-210ENST00000552375 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
DDX54-210ENST00000552375 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
DDX54-210ENST00000552375 FER1L6Q2WGJ9 1857 aa18.2■□□□□ 0.5
DDX54-210ENST00000552375 GLTPD2A6NH11 291 aa18.19■□□□□ 0.5
DDX54-210ENST00000552375 HSP90AB3PQ58FF7 597 aa18.19■□□□□ 0.5
DDX54-210ENST00000552375 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms