RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 PI4KAP1Q8N8J0 262 aa22.37■■□□□ 1.17
APAF1-210ENST00000551964 NUCB1Q02818 461 aa22.37■■□□□ 1.17
APAF1-210ENST00000551964 ACEP12821 1306 aa22.37■■□□□ 1.17
APAF1-210ENST00000551964 ANKRD62A6NC57 917 aa22.36■■□□□ 1.17
APAF1-210ENST00000551964 RRP9O43818 475 aaKnown RBP22.36■■□□□ 1.17
APAF1-210ENST00000551964 TMEM266Q2M3C6 531 aa22.36■■□□□ 1.17
APAF1-210ENST00000551964 CCDC194A0A1B0GVG4 234 aa22.36■■□□□ 1.17
APAF1-210ENST00000551964 DCAF8L1A6NGE4 600 aa22.36■■□□□ 1.17
APAF1-210ENST00000551964 CASQ1P31415 396 aa22.36■■□□□ 1.17
APAF1-210ENST00000551964 NLRP5P59047 1200 aa22.36■■□□□ 1.17
APAF1-210ENST00000551964 USP25Q9UHP3 1055 aa22.36■■□□□ 1.17
APAF1-210ENST00000551964 FGFR1OPO95684 399 aaKnown RBP22.36■■□□□ 1.17
APAF1-210ENST00000551964 KRT28Q7Z3Y7 464 aa22.36■■□□□ 1.17
APAF1-210ENST00000551964 POTEJP0CG39 1038 aa22.35■■□□□ 1.17
APAF1-210ENST00000551964 SLF2Q8IX21 1173 aa22.35■■□□□ 1.17
APAF1-210ENST00000551964 NEMFO60524 1076 aa22.35■■□□□ 1.17
APAF1-210ENST00000551964 NEK1Q96PY6 1258 aa22.35■■□□□ 1.17
APAF1-210ENST00000551964 CACNA2D4Q7Z3S7 1137 aa22.35■■□□□ 1.17
APAF1-210ENST00000551964 BAG4O95429 457 aaKnown RBP22.35■■□□□ 1.17
APAF1-210ENST00000551964 GPTP24298 496 aa22.35■■□□□ 1.17
APAF1-210ENST00000551964 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
APAF1-210ENST00000551964 STX1AQ16623 288 aa22.34■■□□□ 1.17
APAF1-210ENST00000551964 GDPD2Q9HCC8 539 aa22.34■■□□□ 1.17
APAF1-210ENST00000551964 IARSP41252 1262 aaKnown RBP22.33■■□□□ 1.17
APAF1-210ENST00000551964 CCDC96Q2M329 555 aa22.33■■□□□ 1.17
APAF1-210ENST00000551964 LDHAL6AQ6ZMR3 332 aa22.33■■□□□ 1.17
APAF1-210ENST00000551964 UBE3BQ7Z3V4 1068 aa22.33■■□□□ 1.17
APAF1-210ENST00000551964 CRACR2AQ9BSW2 395 aa22.33■■□□□ 1.17
APAF1-210ENST00000551964 TFIP11Q9UBB9 837 aaKnown RBP22.33■■□□□ 1.17
APAF1-210ENST00000551964 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.16
APAF1-210ENST00000551964 ATP5J2-PTCD1G3V325 749 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 EXOC5O00471 708 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 URI1O94763 535 aaPredicted RBP22.32■■□□□ 1.16
APAF1-210ENST00000551964 KIF4BQ2VIQ3 1234 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 TSHZ3Q63HK5 1081 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 TMEM67Q5HYA8 995 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 VPS36Q86VN1 386 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 RHPN1Q8TCX5 695 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 KIF20AO95235 890 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 SNRPA1P09661 255 aaKnown RBP22.32■■□□□ 1.16
APAF1-210ENST00000551964 SSR1P43307 286 aaKnown RBP22.32■■□□□ 1.16
APAF1-210ENST00000551964 GSDMDP57764 484 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 ANKRD24Q8TF21 1146 aa22.32■■□□□ 1.16
APAF1-210ENST00000551964 RPGRQ92834 1020 aaKnown RBP22.32■■□□□ 1.16
APAF1-210ENST00000551964 CETN2P41208 172 aa22.31■■□□□ 1.16
APAF1-210ENST00000551964 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
APAF1-210ENST00000551964 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
APAF1-210ENST00000551964 UBE2HP62256 183 aa22.31■■□□□ 1.16
APAF1-210ENST00000551964 NCOA7Q8NI08 942 aa22.31■■□□□ 1.16
APAF1-210ENST00000551964 KDM5BQ9UGL1 1544 aa22.31■■□□□ 1.16
APAF1-210ENST00000551964 THOC2Q8NI27 1593 aaKnown RBP22.31■■□□□ 1.16
APAF1-210ENST00000551964 GBP2P32456 591 aaPredicted RBP22.31■■□□□ 1.16
APAF1-210ENST00000551964 CUL5Q93034 780 aa22.31■■□□□ 1.16
APAF1-210ENST00000551964 NUP88Q99567 741 aaPredicted RBP22.31■■□□□ 1.16
APAF1-210ENST00000551964 CDC5LQ99459 802 aaKnown RBP22.31■■□□□ 1.16
APAF1-210ENST00000551964 SNRKQ9NRH2 765 aa22.31■■□□□ 1.16
APAF1-210ENST00000551964 YEATS4O95619 227 aa22.3■■□□□ 1.16
APAF1-210ENST00000551964 ORC3Q9UBD5 711 aaPredicted RBP22.3■■□□□ 1.16
APAF1-210ENST00000551964 MAP9Q49MG5 647 aa22.3■■□□□ 1.16
APAF1-210ENST00000551964 MCM3P25205 808 aa22.29■■□□□ 1.16
APAF1-210ENST00000551964 KIF5BP33176 963 aa22.29■■□□□ 1.16
APAF1-210ENST00000551964 KLHL40Q2TBA0 621 aa22.29■■□□□ 1.16
APAF1-210ENST00000551964 CCDC12Q8WUD4 166 aaPredicted RBP22.29■■□□□ 1.16
APAF1-210ENST00000551964 UBA5Q9GZZ9 404 aa22.29■■□□□ 1.16
APAF1-210ENST00000551964 TNNT1P13805 278 aa22.29■■□□□ 1.16
APAF1-210ENST00000551964 METAP2P50579 478 aaKnown RBP eCLIP22.29■■□□□ 1.16
APAF1-210ENST00000551964 SDSP20132 328 aa22.29■■□□□ 1.16
APAF1-210ENST00000551964 TTC21AQ8NDW8 1320 aa22.29■■□□□ 1.16
APAF1-210ENST00000551964 USO1O60763 962 aaKnown RBP22.28■■□□□ 1.16
APAF1-210ENST00000551964 UVSSAQ2YD98 709 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 MFSD6Q6ZSS7 791 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 ADCY5O95622 1261 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 ADAMTS2O95450 1211 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 HAND2P61296 217 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 PYM1Q9BRP8 204 aaKnown RBP22.28■■□□□ 1.16
APAF1-210ENST00000551964 ZSCAN16Q9H4T2 348 aaPredicted RBP22.28■■□□□ 1.16
APAF1-210ENST00000551964 CAVIN2O95810 425 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 ANKRD13DQ6ZTN6 518 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 TMX3Q96JJ7 454 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 NUP160Q12769 1436 aa22.28■■□□□ 1.16
APAF1-210ENST00000551964 LDHCP07864 332 aa22.27■■□□□ 1.16
APAF1-210ENST00000551964 MEIS3Q99687 375 aa22.27■■□□□ 1.16
APAF1-210ENST00000551964 BIN1O00499 593 aa22.27■■□□□ 1.16
APAF1-210ENST00000551964 MCM5P33992 734 aa22.27■■□□□ 1.16
APAF1-210ENST00000551964 URB2Q14146 1524 aaKnown RBP22.27■■□□□ 1.16
APAF1-210ENST00000551964 UQCRFS1P1P0C7P4 283 aa22.27■■□□□ 1.16
APAF1-210ENST00000551964 CPLX3Q8WVH0 158 aa22.27■■□□□ 1.16
APAF1-210ENST00000551964 EZRP15311 586 aaKnown RBP22.27■■□□□ 1.15
APAF1-210ENST00000551964 PDE4BQ07343 736 aa22.27■■□□□ 1.15
APAF1-210ENST00000551964 TMC6Q7Z403 805 aa22.27■■□□□ 1.15
APAF1-210ENST00000551964 CCDC144CPQ8IYA2 1237 aa22.27■■□□□ 1.15
APAF1-210ENST00000551964 MICU3Q86XE3 530 aa22.26■■□□□ 1.15
APAF1-210ENST00000551964 AMPD3Q01432 767 aa22.26■■□□□ 1.15
APAF1-210ENST00000551964 TAF3Q5VWG9 929 aa22.26■■□□□ 1.15
APAF1-210ENST00000551964 KANK3Q6NY19 840 aa22.26■■□□□ 1.15
APAF1-210ENST00000551964 TCP11L1Q9NUJ3 509 aa22.26■■□□□ 1.15
APAF1-210ENST00000551964 BIVM-ERCC5R4GMW8 1640 aa22.26■■□□□ 1.15
APAF1-210ENST00000551964 EHMT1Q9H9B1 1298 aa22.26■■□□□ 1.15
APAF1-210ENST00000551964 ZSCAN22P10073 491 aaPredicted RBP22.26■■□□□ 1.15
APAF1-210ENST00000551964 ZNF165P49910 485 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms