RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 BEND7Q8N7W2 519 aaPredicted RBP6.14□□□□□ -1.43
LIMA1-208ENST00000551691 RETREG2Q8NC44 543 aa6.14□□□□□ -1.43
LIMA1-208ENST00000551691 OXCT2Q9BYC2 517 aaPredicted RBP6.14□□□□□ -1.43
LIMA1-208ENST00000551691 CARMIL2Q6F5E8 1435 aa6.14□□□□□ -1.43
LIMA1-208ENST00000551691 PATL2C9JE40 543 aaKnown RBP6.13□□□□□ -1.43
LIMA1-208ENST00000551691 OIP5O43482 229 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 MSX1P28360 303 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 MCCD1P59942 119 aaPredicted RBP6.13□□□□□ -1.43
LIMA1-208ENST00000551691 GNASQ5JWF2 1037 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 CCDC125Q86Z20 511 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 GALNT6Q8NCL4 622 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 KLRG1Q96E93 195 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 ABHD17AQ96GS6 310 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 SPOCK3Q9BQ16 436 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 FHDC1Q9C0D6 1143 aaPredicted RBP6.13□□□□□ -1.43
LIMA1-208ENST00000551691 RRAGCQ9HB90 399 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 ETNK1Q9HBU6 452 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 DOLKQ9UPQ8 538 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 HRH3Q9Y5N1 445 aa6.13□□□□□ -1.43
LIMA1-208ENST00000551691 MSTNO14793 375 aa6.12□□□□□ -1.43
LIMA1-208ENST00000551691 IGHA1P01876 353 aa6.12□□□□□ -1.43
LIMA1-208ENST00000551691 PLA2G4AP47712 749 aa6.12□□□□□ -1.43
LIMA1-208ENST00000551691 FOXK2Q01167 660 aa6.12□□□□□ -1.43
LIMA1-208ENST00000551691 VAC14Q08AM6 782 aa6.12□□□□□ -1.43
LIMA1-208ENST00000551691 UBAP2LQ14157 1087 aaKnown RBP6.12□□□□□ -1.43
LIMA1-208ENST00000551691 WDR44Q5JSH3 913 aa6.12□□□□□ -1.43
LIMA1-208ENST00000551691 POTEAQ6S8J7 498 aa6.12□□□□□ -1.43
LIMA1-208ENST00000551691 XAGE2Q96GT9 111 aa6.12□□□□□ -1.43
LIMA1-208ENST00000551691 NSFL1CQ9UNZ2 370 aaKnown RBP6.12□□□□□ -1.43
LIMA1-208ENST00000551691 SIGLEC1Q9BZZ2 1709 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 DISP1Q96F81 1524 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 PTPRTO14522 1441 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 A0A1B0GTH6 734 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 C2CD2LO14523 706 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 GTF2E1P29083 439 aaPredicted RBP6.11□□□□□ -1.43
LIMA1-208ENST00000551691 CTBSQ01459 385 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 IRF5Q13568 498 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 TLR1Q15399 786 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 RNF135Q8IUD6 432 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 GLMNQ92990 594 aa6.11□□□□□ -1.43
LIMA1-208ENST00000551691 CSB-PGBD3P0DP91 1061 aa6.1□□□□□ -1.43
LIMA1-208ENST00000551691 BMP4P12644 408 aa6.1□□□□□ -1.43
LIMA1-208ENST00000551691 MAP2K3P46734 347 aa6.1□□□□□ -1.43
LIMA1-208ENST00000551691 SLFNL1Q499Z3 407 aa6.1□□□□□ -1.43
LIMA1-208ENST00000551691 PGBD3Q8N328 593 aa6.1□□□□□ -1.43
LIMA1-208ENST00000551691 ZNF592Q92610 1267 aa6.1□□□□□ -1.43
LIMA1-208ENST00000551691 CFHR5Q9BXR6 569 aa6.1□□□□□ -1.43
LIMA1-208ENST00000551691 CFAP43Q8NDM7 1665 aa6.1□□□□□ -1.43
LIMA1-208ENST00000551691 KRBA1A5PL33 1030 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 BNIP3LO60238 219 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 PROCP04070 461 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 AMPD1P23109 780 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 COL8A1P27658 744 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 PHTF2Q8N3S3 785 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 EDARADDQ8WWZ3 215 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 GZF1Q9H116 711 aaPredicted RBP6.09□□□□□ -1.43
LIMA1-208ENST00000551691 SUV39H2Q9H5I1 410 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 SERTAD1Q9UHV2 236 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 PHF24Q9UPV7 400 aa6.09□□□□□ -1.43
LIMA1-208ENST00000551691 FGFR3P22607 806 aa6.08□□□□□ -1.44
LIMA1-208ENST00000551691 EIF4G2P78344 907 aaKnown RBP eCLIP6.08□□□□□ -1.44
LIMA1-208ENST00000551691 GRIN2CQ14957 1233 aa6.08□□□□□ -1.44
LIMA1-208ENST00000551691 ESCO1Q5FWF5 840 aa6.08□□□□□ -1.44
LIMA1-208ENST00000551691 EFHC2Q5JST6 749 aa6.08□□□□□ -1.44
LIMA1-208ENST00000551691 RHBDD1Q8TEB9 315 aa6.08□□□□□ -1.44
LIMA1-208ENST00000551691 AIDAQ96BJ3 306 aa6.08□□□□□ -1.44
LIMA1-208ENST00000551691 GGA1Q9UJY5 639 aa6.08□□□□□ -1.44
LIMA1-208ENST00000551691 FRMPD1Q5SYB0 1578 aa6.08□□□□□ -1.44
LIMA1-208ENST00000551691 DCDC2BA2VCK2 349 aa6.07□□□□□ -1.44
LIMA1-208ENST00000551691 SCNN1DP51172 638 aa6.07□□□□□ -1.44
LIMA1-208ENST00000551691 GDF10P55107 478 aa6.07□□□□□ -1.44
LIMA1-208ENST00000551691 USP4Q13107 963 aa6.07□□□□□ -1.44
LIMA1-208ENST00000551691 WASHC4Q2M389 1173 aa6.07□□□□□ -1.44
LIMA1-208ENST00000551691 PPARGC1BQ86YN6 1023 aaKnown RBP6.07□□□□□ -1.44
LIMA1-208ENST00000551691 USP3Q9Y6I4 520 aa6.07□□□□□ -1.44
LIMA1-208ENST00000551691 IQSEC2Q5JU85 1478 aa6.07□□□□□ -1.44
LIMA1-208ENST00000551691 CARMIL1Q5VZK9 1371 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 NEURL1BA8MQ27 555 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 ADAM23O75077 832 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 RFX1P22670 979 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 TBC1D9Q6ZT07 1266 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 PBXIP1Q96AQ6 731 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 NDFIP2Q9NV92 336 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 HCN2Q9UL51 889 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 MKL2Q9ULH7 1088 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 ATXN7L1Q9ULK2 861 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-208ENST00000551691 UHRF1BP1Q6BDS2 1440 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 POGZQ7Z3K3 1410 aa6.06□□□□□ -1.44
LIMA1-208ENST00000551691 PREX1Q8TCU6 1659 aa6.05□□□□□ -1.44
LIMA1-208ENST00000551691 TOM1O60784 492 aa6.05□□□□□ -1.44
LIMA1-208ENST00000551691 ATP4AP20648 1035 aa6.05□□□□□ -1.44
LIMA1-208ENST00000551691 MFAP1P55081 439 aaKnown RBP6.05□□□□□ -1.44
LIMA1-208ENST00000551691 ZCCHC2Q9C0B9 1178 aaKnown RBP6.05□□□□□ -1.44
LIMA1-208ENST00000551691 GDF2Q9UK05 429 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-208ENST00000551691 PARP3Q9Y6F1 533 aa6.05□□□□□ -1.44
LIMA1-208ENST00000551691 BIVM-ERCC5R4GMW8 1640 aa6.05□□□□□ -1.44
LIMA1-208ENST00000551691 POM121CA8CG34 1229 aa6.04□□□□□ -1.44
LIMA1-208ENST00000551691 PIK3CDO00329 1044 aa6.04□□□□□ -1.44
LIMA1-208ENST00000551691 INHAP05111 366 aa6.04□□□□□ -1.44
LIMA1-208ENST00000551691 FURINP09958 794 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms