RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 PTPRCP08575 1304 aa14.94□□□□□ -0.02
PRPF40B-213ENST00000551269 COPS6Q7L5N1 327 aa14.94□□□□□ -0.02
PRPF40B-213ENST00000551269 PHAXQ9H814 394 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-213ENST00000551269 MAP3K15Q6ZN16 1313 aa14.93□□□□□ -0.02
PRPF40B-213ENST00000551269 USP42Q9H9J4 1324 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-213ENST00000551269 LRP10Q7Z4F1 713 aa14.93□□□□□ -0.02
PRPF40B-213ENST00000551269 AMIGO3Q86WK7 504 aa14.93□□□□□ -0.02
PRPF40B-213ENST00000551269 FRAT1Q92837 279 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-213ENST00000551269 ARHGEF1Q92888 912 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-213ENST00000551269 ZBTB3Q9H5J0 574 aa14.93□□□□□ -0.02
PRPF40B-213ENST00000551269 TBC1D2BQ9UPU7 963 aa14.93□□□□□ -0.02
PRPF40B-213ENST00000551269 BCAR3O75815 825 aa14.92□□□□□ -0.02
PRPF40B-213ENST00000551269 R3HDM1Q15032 1099 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-213ENST00000551269 TTLL7Q6ZT98 887 aa14.92□□□□□ -0.02
PRPF40B-213ENST00000551269 SMIM5Q71RC9 77 aa14.92□□□□□ -0.02
PRPF40B-213ENST00000551269 RIC3Q7Z5B4 369 aa14.92□□□□□ -0.02
PRPF40B-213ENST00000551269 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-213ENST00000551269 NARFQ9UHQ1 456 aa14.92□□□□□ -0.02
PRPF40B-213ENST00000551269 IPO8O15397 1037 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-213ENST00000551269 BRPF1P55201 1214 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-213ENST00000551269 USPL1Q5W0Q7 1092 aa14.91□□□□□ -0.02
PRPF40B-213ENST00000551269 G2E3Q7L622 706 aa14.91□□□□□ -0.02
PRPF40B-213ENST00000551269 COL23A1Q86Y22 540 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-213ENST00000551269 PLBD2Q8NHP8 589 aa14.91□□□□□ -0.02
PRPF40B-213ENST00000551269 NRXN2Q9P2S2 1712 aa14.91□□□□□ -0.02
PRPF40B-213ENST00000551269 ATP10DQ9P241 1426 aa14.91□□□□□ -0.02
PRPF40B-213ENST00000551269 ADCY9O60503 1353 aa14.9□□□□□ -0.02
PRPF40B-213ENST00000551269 PSDA5PKW4 1024 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-213ENST00000551269 CAMTA2O94983 1202 aa14.9□□□□□ -0.02
PRPF40B-213ENST00000551269 HSP90AB3PQ58FF7 597 aa14.9□□□□□ -0.02
PRPF40B-213ENST00000551269 ANKRD13DQ6ZTN6 518 aa14.9□□□□□ -0.02
PRPF40B-213ENST00000551269 API5Q9BZZ5 524 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-213ENST00000551269 SRP68Q9UHB9 627 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-213ENST00000551269 NOB1Q9ULX3 412 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-213ENST00000551269 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-213ENST00000551269 CACNA1SQ13698 1873 aa14.89□□□□□ -0.03
PRPF40B-213ENST00000551269 ERVV-1B6SEH8 477 aa14.89□□□□□ -0.03
PRPF40B-213ENST00000551269 NEXNQ0ZGT2 675 aa14.89□□□□□ -0.03
PRPF40B-213ENST00000551269 ZKSCAN2Q63HK3 967 aa14.89□□□□□ -0.03
PRPF40B-213ENST00000551269 KSR2Q6VAB6 950 aa14.89□□□□□ -0.03
PRPF40B-213ENST00000551269 FTSJ3Q8IY81 847 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-213ENST00000551269 MAP3K2Q9Y2U5 619 aa14.89□□□□□ -0.03
PRPF40B-213ENST00000551269 PI4KAP2A4QPH2 592 aa14.88□□□□□ -0.03
PRPF40B-213ENST00000551269 RGL2O15211 777 aa14.88□□□□□ -0.03
PRPF40B-213ENST00000551269 GIGYF2Q6Y7W6 1299 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-213ENST00000551269 PI4KAP1Q8N8J0 262 aa14.88□□□□□ -0.03
PRPF40B-213ENST00000551269 DNAAF4Q8WXU2 420 aa14.88□□□□□ -0.03
PRPF40B-213ENST00000551269 KIF13BQ9NQT8 1826 aa14.87□□□□□ -0.03
PRPF40B-213ENST00000551269 GYS1P13807 737 aa14.87□□□□□ -0.03
PRPF40B-213ENST00000551269 SLC4A10Q6U841 1118 aa14.87□□□□□ -0.03
PRPF40B-213ENST00000551269 CLEC4GQ6UXB4 293 aa14.87□□□□□ -0.03
PRPF40B-213ENST00000551269 ATF7IPQ6VMQ6 1270 aa14.87□□□□□ -0.03
PRPF40B-213ENST00000551269 SLC16A10Q8TF71 515 aa14.87□□□□□ -0.03
PRPF40B-213ENST00000551269 ANKRD31Q8N7Z5 1873 aa14.86□□□□□ -0.03
PRPF40B-213ENST00000551269 CARMIL3Q8ND23 1372 aa14.86□□□□□ -0.03
PRPF40B-213ENST00000551269 F6X3S4 739 aa14.86□□□□□ -0.03
PRPF40B-213ENST00000551269 MS4A1P11836 297 aa14.86□□□□□ -0.03
PRPF40B-213ENST00000551269 HLFQ16534 295 aa14.86□□□□□ -0.03
PRPF40B-213ENST00000551269 MSL1Q68DK7 614 aa14.86□□□□□ -0.03
PRPF40B-213ENST00000551269 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
PRPF40B-213ENST00000551269 MYD88Q99836 296 aa14.86□□□□□ -0.03
PRPF40B-213ENST00000551269 SPEF2Q9C093 1822 aa14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 NPHP1O15259 732 aa14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 TRIM27P14373 513 aa14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 RRP1P56182 461 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 BICDL1Q6ZP65 573 aa14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 NLGN1Q8N2Q7 840 aa14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 METTL22Q9BUU2 404 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 NIP7Q9Y221 180 aaKnown RBP eCLIP14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 ABCC4O15439 1325 aa14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 DLEC1Q9Y238 1755 aa14.85□□□□□ -0.03
PRPF40B-213ENST00000551269 TNRC6CQ9HCJ0 1690 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-213ENST00000551269 GPTP24298 496 aa14.84□□□□□ -0.03
PRPF40B-213ENST00000551269 FKBP8Q14318 412 aa14.84□□□□□ -0.03
PRPF40B-213ENST00000551269 TBC1D9BQ66K14 1250 aa14.84□□□□□ -0.03
PRPF40B-213ENST00000551269 MTFR1LQ9H019 292 aa14.84□□□□□ -0.03
PRPF40B-213ENST00000551269 BCL2L12Q9HB09 334 aa14.84□□□□□ -0.03
PRPF40B-213ENST00000551269 LRP5O75197 1615 aa14.84□□□□□ -0.03
PRPF40B-213ENST00000551269 IBTKQ9P2D0 1353 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-213ENST00000551269 ZBTB7AO95365 584 aa14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 CCT4P50991 539 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 TCIRG1Q13488 830 aa14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 PARP10Q53GL7 1025 aa14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 CLUAP1Q96AJ1 413 aa14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 SETDB2Q96T68 719 aa14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 PDGFDQ9GZP0 370 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 COL11A2P13942 1736 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-213ENST00000551269 ATP5J2-PTCD1G3V325 749 aa14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 PLIN1O60240 522 aa14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 POLD1P28340 1107 aa14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 PPP1R42Q7Z4L9 355 aa14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 SRCIN1Q9C0H9 1055 aa14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 CWC25Q9NXE8 425 aaPredicted RBP14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 PARP3Q9Y6F1 533 aa14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 UBN2Q6ZU65 1347 aa14.82□□□□□ -0.04
PRPF40B-213ENST00000551269 MMP10P09238 476 aa14.81□□□□□ -0.04
PRPF40B-213ENST00000551269 NFIXQ14938 502 aa14.81□□□□□ -0.04
PRPF40B-213ENST00000551269 NYXQ9GZU5 481 aa14.81□□□□□ -0.04
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