RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
CEP290-205ENST00000550962 DALRD3Q5D0E6 543 aaKnown RBP17.3■□□□□ 0.36
CEP290-205ENST00000550962 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
CEP290-205ENST00000550962 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
CEP290-205ENST00000550962 CCDC27Q2M243 656 aa17.29■□□□□ 0.36
CEP290-205ENST00000550962 NBPF5PQ86XG9 351 aaPredicted RBP17.29■□□□□ 0.36
CEP290-205ENST00000550962 BRIP1Q9BX63 1249 aa17.29■□□□□ 0.36
CEP290-205ENST00000550962 NIP7Q9Y221 180 aaKnown RBP eCLIP17.29■□□□□ 0.36
CEP290-205ENST00000550962 N4BP2Q86UW6 1770 aaPredicted RBP17.28■□□□□ 0.36
CEP290-205ENST00000550962 HDGFL1Q5TGJ6 251 aa17.28■□□□□ 0.36
CEP290-205ENST00000550962 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
CEP290-205ENST00000550962 NYXQ9GZU5 481 aa17.28■□□□□ 0.36
CEP290-205ENST00000550962 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
CEP290-205ENST00000550962 AFDNP55196 1824 aaKnown RBP17.27■□□□□ 0.36
CEP290-205ENST00000550962 GTF2E1P29083 439 aaPredicted RBP17.27■□□□□ 0.36
CEP290-205ENST00000550962 PRR5LQ6MZQ0 368 aa17.27■□□□□ 0.36
CEP290-205ENST00000550962 C2CD5Q86YS7 1000 aa17.27■□□□□ 0.36
CEP290-205ENST00000550962 MBIPQ9NS73 344 aa17.27■□□□□ 0.36
CEP290-205ENST00000550962 CHRNA5P30532 468 aa17.26■□□□□ 0.35
CEP290-205ENST00000550962 DDX21Q9NR30 783 aaKnown RBP eCLIP17.26■□□□□ 0.35
CEP290-205ENST00000550962 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
CEP290-205ENST00000550962 ZNF853P0CG23 659 aa17.25■□□□□ 0.35
CEP290-205ENST00000550962 KCNA3P22001 575 aa17.25■□□□□ 0.35
CEP290-205ENST00000550962 HSP90AB3PQ58FF7 597 aa17.25■□□□□ 0.35
CEP290-205ENST00000550962 ZBTB3Q9H5J0 574 aa17.25■□□□□ 0.35
CEP290-205ENST00000550962 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
CEP290-205ENST00000550962 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
CEP290-205ENST00000550962 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
CEP290-205ENST00000550962 FAM9BQ8IZU0 186 aa17.24■□□□□ 0.35
CEP290-205ENST00000550962 TTLL6Q8N841 843 aa17.24■□□□□ 0.35
CEP290-205ENST00000550962 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
CEP290-205ENST00000550962 IL16Q14005 1332 aa17.23■□□□□ 0.35
CEP290-205ENST00000550962 HLFQ16534 295 aa17.23■□□□□ 0.35
CEP290-205ENST00000550962 PARP10Q53GL7 1025 aa17.23■□□□□ 0.35
CEP290-205ENST00000550962 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
CEP290-205ENST00000550962 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
CEP290-205ENST00000550962 WWC1Q8IX03 1113 aa17.23■□□□□ 0.35
CEP290-205ENST00000550962 ZNF622Q969S3 477 aaKnown RBP eCLIP17.23■□□□□ 0.353e-8■■■□□ 17.8
CEP290-205ENST00000550962 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
CEP290-205ENST00000550962 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
CEP290-205ENST00000550962 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
CEP290-205ENST00000550962 PDIA6Q15084 440 aa17.22■□□□□ 0.35
CEP290-205ENST00000550962 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
CEP290-205ENST00000550962 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
CEP290-205ENST00000550962 CNKSR1Q969H4 720 aa17.22■□□□□ 0.35
CEP290-205ENST00000550962 CHPF2Q9P2E5 772 aa17.22■□□□□ 0.35
CEP290-205ENST00000550962 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
CEP290-205ENST00000550962 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
CEP290-205ENST00000550962 STYK1Q6J9G0 422 aa17.21■□□□□ 0.35
CEP290-205ENST00000550962 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
CEP290-205ENST00000550962 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
CEP290-205ENST00000550962 DLEC1Q9Y238 1755 aa17.2■□□□□ 0.34
CEP290-205ENST00000550962 FAM177BA6PVY3 158 aa17.2■□□□□ 0.34
CEP290-205ENST00000550962 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
CEP290-205ENST00000550962 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
CEP290-205ENST00000550962 WDR63Q8IWG1 891 aa17.2■□□□□ 0.34
CEP290-205ENST00000550962 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
CEP290-205ENST00000550962 MASTLQ96GX5 879 aa17.2■□□□□ 0.34
CEP290-205ENST00000550962 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
CEP290-205ENST00000550962 UTRNP46939 3433 aa17.19■□□□□ 0.34
CEP290-205ENST00000550962 ANXA1P04083 346 aa17.19■□□□□ 0.34
CEP290-205ENST00000550962 GPTP24298 496 aa17.19■□□□□ 0.34
CEP290-205ENST00000550962 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
CEP290-205ENST00000550962 LRP10Q7Z4F1 713 aa17.19■□□□□ 0.34
CEP290-205ENST00000550962 SRGNP10124 158 aa17.18■□□□□ 0.34
CEP290-205ENST00000550962 NPR1P16066 1061 aa17.18■□□□□ 0.34
CEP290-205ENST00000550962 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
CEP290-205ENST00000550962 ZNF34Q8IZ26 560 aa17.18■□□□□ 0.34
CEP290-205ENST00000550962 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
CEP290-205ENST00000550962 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
CEP290-205ENST00000550962 NUP98P52948 1817 aa17.17■□□□□ 0.34
CEP290-205ENST00000550962 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
CEP290-205ENST00000550962 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
CEP290-205ENST00000550962 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
CEP290-205ENST00000550962 ANKRD31Q8N7Z5 1873 aa17.16■□□□□ 0.34
CEP290-205ENST00000550962 RIC1Q4ADV7 1423 aa17.16■□□□□ 0.34
CEP290-205ENST00000550962 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
CEP290-205ENST00000550962 ALDH1B1P30837 517 aa17.16■□□□□ 0.34
CEP290-205ENST00000550962 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
CEP290-205ENST00000550962 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
CEP290-205ENST00000550962 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
CEP290-205ENST00000550962 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
CEP290-205ENST00000550962 ADCY9O60503 1353 aa17.15■□□□□ 0.34
CEP290-205ENST00000550962 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
CEP290-205ENST00000550962 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
CEP290-205ENST00000550962 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
CEP290-205ENST00000550962 TSR2Q969E8 191 aaKnown RBP17.15■□□□□ 0.34
CEP290-205ENST00000550962 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
CEP290-205ENST00000550962 KLRG2A4D1S0 409 aaPredicted RBP17.14■□□□□ 0.33
CEP290-205ENST00000550962 TWISTNBQ3B726 338 aaPredicted RBP17.14■□□□□ 0.33
CEP290-205ENST00000550962 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
CEP290-205ENST00000550962 PRPF40BQ6NWY9 871 aaKnown RBP17.14■□□□□ 0.33
CEP290-205ENST00000550962 NUTM1Q86Y26 1132 aa17.14■□□□□ 0.33
CEP290-205ENST00000550962 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
CEP290-205ENST00000550962 GPBP1L1Q9HC44 474 aaPredicted RBP17.14■□□□□ 0.33
CEP290-205ENST00000550962 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
CEP290-205ENST00000550962 SENP3-EIF4A1A0A087X0R7 540 aa17.13■□□□□ 0.33
CEP290-205ENST00000550962 NTSR2O95665 410 aa17.13■□□□□ 0.33
CEP290-205ENST00000550962 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
CEP290-205ENST00000550962 C9orf131Q5VYM1 1079 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms