RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
TMEM116-213ENST00000550831 NECTIN2Q92692 538 aa11.43□□□□□ -0.58
TMEM116-213ENST00000550831 UPF2Q9HAU5 1272 aaKnown RBP11.43□□□□□ -0.58
TMEM116-213ENST00000550831 HDAC5Q9UQL6 1122 aa11.43□□□□□ -0.58
TMEM116-213ENST00000550831 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
TMEM116-213ENST00000550831 UTYO14607 1347 aa11.43□□□□□ -0.58
TMEM116-213ENST00000550831 TNS2Q63HR2 1409 aa11.42□□□□□ -0.58
TMEM116-213ENST00000550831 WNK3Q9BYP7 1800 aa11.42□□□□□ -0.58
TMEM116-213ENST00000550831 PI4KAP2A4QPH2 592 aa11.42□□□□□ -0.58
TMEM116-213ENST00000550831 SEC24BO95487 1268 aa11.42□□□□□ -0.58
TMEM116-213ENST00000550831 MTX1Q13505 466 aa11.42□□□□□ -0.58
TMEM116-213ENST00000550831 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
TMEM116-213ENST00000550831 PI4KAP1Q8N8J0 262 aa11.42□□□□□ -0.58
TMEM116-213ENST00000550831 FMNL2Q96PY5 1086 aa11.42□□□□□ -0.58
TMEM116-213ENST00000550831 DDX58O95786 925 aaKnown RBP11.41□□□□□ -0.58
TMEM116-213ENST00000550831 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-213ENST00000550831 CABP4P57796 275 aa11.41□□□□□ -0.58
TMEM116-213ENST00000550831 KCPQ6ZWJ8 1503 aa11.41□□□□□ -0.58
TMEM116-213ENST00000550831 NPM2Q86SE8 214 aaKnown RBP11.41□□□□□ -0.58
TMEM116-213ENST00000550831 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
TMEM116-213ENST00000550831 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
TMEM116-213ENST00000550831 COL15A1P39059 1388 aa11.4□□□□□ -0.58
TMEM116-213ENST00000550831 SALL3Q9BXA9 1300 aa11.4□□□□□ -0.58
TMEM116-213ENST00000550831 SF3B2Q13435 895 aaKnown RBP11.4□□□□□ -0.58
TMEM116-213ENST00000550831 TTC22Q5TAA0 569 aa11.4□□□□□ -0.58
TMEM116-213ENST00000550831 DEFB132Q7Z7B7 95 aa11.4□□□□□ -0.58
TMEM116-213ENST00000550831 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
TMEM116-213ENST00000550831 ZNF496Q96IT1 587 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-213ENST00000550831 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
TMEM116-213ENST00000550831 PROSER3Q2NL68 480 aa11.39□□□□□ -0.59
TMEM116-213ENST00000550831 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
TMEM116-213ENST00000550831 TTC5Q8N0Z6 440 aa11.39□□□□□ -0.59
TMEM116-213ENST00000550831 LRRFIP2Q9Y608 721 aaKnown RBP11.39□□□□□ -0.59
TMEM116-213ENST00000550831 NRAPQ86VF7 1730 aa11.39□□□□□ -0.59
TMEM116-213ENST00000550831 AOX1Q06278 1338 aa11.38□□□□□ -0.59
TMEM116-213ENST00000550831 PNMA6EA0A0J9YXQ4 647 aa11.38□□□□□ -0.59
TMEM116-213ENST00000550831 PRAMEF22A3QJZ6 481 aa11.38□□□□□ -0.59
TMEM116-213ENST00000550831 RBM25P49756 843 aaKnown RBP11.38□□□□□ -0.59
TMEM116-213ENST00000550831 SLC39A6Q13433 755 aa11.38□□□□□ -0.59
TMEM116-213ENST00000550831 ERICH6Q7L0X2 663 aa11.38□□□□□ -0.59
TMEM116-213ENST00000550831 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
TMEM116-213ENST00000550831 NUBP1P53384 320 aa11.37□□□□□ -0.59
TMEM116-213ENST00000550831 EVA1CP58658 441 aa11.37□□□□□ -0.59
TMEM116-213ENST00000550831 VPS72Q15906 364 aa11.37□□□□□ -0.59
TMEM116-213ENST00000550831 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
TMEM116-213ENST00000550831 STAP2Q9UGK3 403 aa11.37□□□□□ -0.59
TMEM116-213ENST00000550831 CDC45O75419 566 aa11.36□□□□□ -0.59
TMEM116-213ENST00000550831 NBPF7P0C2Y1 421 aaPredicted RBP11.36□□□□□ -0.59
TMEM116-213ENST00000550831 GSPT1P15170 499 aaKnown RBP11.36□□□□□ -0.59
TMEM116-213ENST00000550831 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
TMEM116-213ENST00000550831 LRRCC1Q9C099 1032 aa11.36□□□□□ -0.59
TMEM116-213ENST00000550831 ARFGEF2Q9Y6D5 1785 aa11.36□□□□□ -0.59
TMEM116-213ENST00000550831 NUP188Q5SRE5 1749 aa11.36□□□□□ -0.59
TMEM116-213ENST00000550831 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-213ENST00000550831 ANXA1P04083 346 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-213ENST00000550831 CDCA7Q9BWT1 371 aaPredicted RBP11.35□□□□□ -0.59
TMEM116-213ENST00000550831 C22orf23Q9BZE7 217 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 BTG4Q9NY30 223 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 USP16Q9Y5T5 823 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 ITGB4P16144 1822 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 GRM8O00222 908 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 PDE1AP54750 535 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 TBC1D9Q6ZT07 1266 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 KRT27Q7Z3Y8 459 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 PPP1R42Q7Z4L9 355 aa11.35□□□□□ -0.59
TMEM116-213ENST00000550831 THRAP3Q9Y2W1 955 aaKnown RBP11.35□□□□□ -0.59
TMEM116-213ENST00000550831 USP42Q9H9J4 1324 aaKnown RBP11.34□□□□□ -0.59
TMEM116-213ENST00000550831 CICQ96RK0 1608 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-213ENST00000550831 IGKV5-2P06315 115 aa11.34□□□□□ -0.59
TMEM116-213ENST00000550831 BAG6P46379 1132 aa11.34□□□□□ -0.59
TMEM116-213ENST00000550831 BECN1Q14457 450 aa11.34□□□□□ -0.59
TMEM116-213ENST00000550831 ANKRD13DQ6ZTN6 518 aa11.34□□□□□ -0.59
TMEM116-213ENST00000550831 C16orf71Q8IYS4 520 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-213ENST00000550831 XAGE3Q8WTP9 111 aa11.34□□□□□ -0.59
TMEM116-213ENST00000550831 STRN4Q9NRL3 753 aa11.34□□□□□ -0.59
TMEM116-213ENST00000550831 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
TMEM116-213ENST00000550831 NEXNQ0ZGT2 675 aa11.33□□□□□ -0.6
TMEM116-213ENST00000550831 COPS6Q7L5N1 327 aa11.33□□□□□ -0.6
TMEM116-213ENST00000550831 PLBD2Q8NHP8 589 aa11.33□□□□□ -0.6
TMEM116-213ENST00000550831 KIF1BPQ96EK5 621 aa11.33□□□□□ -0.6
TMEM116-213ENST00000550831 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-213ENST00000550831 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
TMEM116-213ENST00000550831 EXOC6BQ9Y2D4 811 aa11.33□□□□□ -0.6
TMEM116-213ENST00000550831 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
TMEM116-213ENST00000550831 AFDNP55196 1824 aaKnown RBP11.32□□□□□ -0.6
TMEM116-213ENST00000550831 BCL9O00512 1426 aa11.32□□□□□ -0.6
TMEM116-213ENST00000550831 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
TMEM116-213ENST00000550831 SMARCA5O60264 1052 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-213ENST00000550831 MFAP1P55081 439 aaKnown RBP11.32□□□□□ -0.6
TMEM116-213ENST00000550831 RIC3Q7Z5B4 369 aa11.32□□□□□ -0.6
TMEM116-213ENST00000550831 OTUD7AQ8TE49 926 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-213ENST00000550831 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
TMEM116-213ENST00000550831 EPB41L2O43491 1005 aaKnown RBP11.31□□□□□ -0.6
TMEM116-213ENST00000550831 SDSP20132 328 aa11.31□□□□□ -0.6
TMEM116-213ENST00000550831 MX1P20591 662 aa11.31□□□□□ -0.6
TMEM116-213ENST00000550831 GCKRQ14397 625 aa11.31□□□□□ -0.6
TMEM116-213ENST00000550831 GSE1Q14687 1217 aa11.31□□□□□ -0.6
TMEM116-213ENST00000550831 CWF19L2Q2TBE0 894 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms