RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-209ENST00000550587 ZBTB7CA1YPR0 619 aa8.44□□□□□ -1.06
DEPDC4-209ENST00000550587 CAMKK2Q96RR4 588 aa8.44□□□□□ -1.06
DEPDC4-209ENST00000550587 BRD4O60885 1362 aaPredicted RBP8.44□□□□□ -1.06
DEPDC4-209ENST00000550587 DISP2A7MBM2 1401 aa8.44□□□□□ -1.06
DEPDC4-209ENST00000550587 GCP02774 474 aa8.43□□□□□ -1.06
DEPDC4-209ENST00000550587 LARP1Q6PKG0 1096 aaKnown RBP8.43□□□□□ -1.06
DEPDC4-209ENST00000550587 RNF19BQ6ZMZ0 732 aa8.43□□□□□ -1.06
DEPDC4-209ENST00000550587 POLR3GLQ9BT43 218 aa8.43□□□□□ -1.06
DEPDC4-209ENST00000550587 PKD2L1Q9P0L9 805 aa8.43□□□□□ -1.06
DEPDC4-209ENST00000550587 POLR3AO14802 1390 aaPredicted RBP8.43□□□□□ -1.06
DEPDC4-209ENST00000550587 SSH2Q76I76 1423 aa8.43□□□□□ -1.06
DEPDC4-209ENST00000550587 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
DEPDC4-209ENST00000550587 POTECB2RU33 542 aa8.42□□□□□ -1.06
DEPDC4-209ENST00000550587 BRICD5Q6PL45 260 aa8.42□□□□□ -1.06
DEPDC4-209ENST00000550587 QRICH2Q9H0J4 1663 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 THSD7AQ9UPZ6 1657 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 PPIP5K1Q6PFW1 1433 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 CPDO75976 1380 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 EVC2Q86UK5 1308 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 SENP3-EIF4A1A0A087X0R7 540 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 RPIAP49247 311 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 ZNF775Q96BV0 537 aaPredicted RBP8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 CDCA7Q9BWT1 371 aaPredicted RBP8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 SPON1Q9HCB6 807 aa8.41□□□□□ -1.06
DEPDC4-209ENST00000550587 PHRF1Q9P1Y6 1649 aaKnown RBP8.4□□□□□ -1.06
DEPDC4-209ENST00000550587 ST8SIA5O15466 376 aa8.4□□□□□ -1.06
DEPDC4-209ENST00000550587 ANP32CO43423 234 aa8.4□□□□□ -1.06
DEPDC4-209ENST00000550587 CSB-PGBD3P0DP91 1061 aa8.4□□□□□ -1.06
DEPDC4-209ENST00000550587 DDB1Q16531 1140 aa8.4□□□□□ -1.06
DEPDC4-209ENST00000550587 KCNH5Q8NCM2 988 aa8.4□□□□□ -1.06
DEPDC4-209ENST00000550587 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
DEPDC4-209ENST00000550587 CRYBG1Q9Y4K1 1723 aa8.4□□□□□ -1.07
DEPDC4-209ENST00000550587 CRB1P82279 1406 aa8.39□□□□□ -1.07
DEPDC4-209ENST00000550587 USP19O94966 1318 aa8.39□□□□□ -1.07
DEPDC4-209ENST00000550587 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
DEPDC4-209ENST00000550587 KCNQ2O43526 872 aa8.39□□□□□ -1.07
DEPDC4-209ENST00000550587 CD46P15529 392 aa8.39□□□□□ -1.07
DEPDC4-209ENST00000550587 MAP2K5Q13163 448 aa8.39□□□□□ -1.07
DEPDC4-209ENST00000550587 PANK3Q9H999 370 aa8.39□□□□□ -1.07
DEPDC4-209ENST00000550587 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
DEPDC4-209ENST00000550587 OVOS2A0A0G2JMS6 1433 aa8.38□□□□□ -1.07
DEPDC4-209ENST00000550587 OVOS2A0A0J9YW53 1432 aa8.38□□□□□ -1.07
DEPDC4-209ENST00000550587 OVOS2Q6IE36 1432 aa8.38□□□□□ -1.07
DEPDC4-209ENST00000550587 TNS1Q9HBL0 1735 aaKnown RBP8.38□□□□□ -1.07
DEPDC4-209ENST00000550587 CAMTA1Q9Y6Y1 1673 aa8.38□□□□□ -1.07
DEPDC4-209ENST00000550587 PLSCR1O15162 318 aa8.38□□□□□ -1.07
DEPDC4-209ENST00000550587 GRIPAP1Q4V328 841 aa8.38□□□□□ -1.07
DEPDC4-209ENST00000550587 AATKQ6ZMQ8 1374 aa8.37□□□□□ -1.07
DEPDC4-209ENST00000550587 EXOC5O00471 708 aa8.37□□□□□ -1.07
DEPDC4-209ENST00000550587 IRF6O14896 467 aa8.37□□□□□ -1.07
DEPDC4-209ENST00000550587 CD2BP2O95400 341 aaKnown RBP8.37□□□□□ -1.07
DEPDC4-209ENST00000550587 MDM2Q00987 491 aaPredicted RBP8.37□□□□□ -1.07
DEPDC4-209ENST00000550587 MSS51Q4VC12 460 aa8.37□□□□□ -1.07
DEPDC4-209ENST00000550587 AAASQ9NRG9 546 aa8.37□□□□□ -1.07
DEPDC4-209ENST00000550587 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
DEPDC4-209ENST00000550587 NRKQ7Z2Y5 1582 aa8.36□□□□□ -1.07
DEPDC4-209ENST00000550587 CCER2I3L3R5 266 aa8.36□□□□□ -1.07
DEPDC4-209ENST00000550587 HLA-CQ95604 372 aa8.36□□□□□ -1.07
DEPDC4-209ENST00000550587 PRKRIP1Q9H875 184 aaPredicted RBP8.36□□□□□ -1.07
DEPDC4-209ENST00000550587 COL5A2P05997 1499 aaPredicted RBP8.36□□□□□ -1.07
DEPDC4-209ENST00000550587 USP6P35125 1406 aa8.36□□□□□ -1.07
DEPDC4-209ENST00000550587 WDR17Q8IZU2 1322 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 TTC21AQ8NDW8 1320 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 KDM4AO75164 1064 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 VSIG10Q8N0Z9 540 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 SLC12A5Q9H2X9 1139 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 STK32BQ9NY57 414 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 KNSTRNQ9Y448 316 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 KTN1Q86UP2 1357 aaKnown RBP8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
DEPDC4-209ENST00000550587 MYOM1P52179 1685 aa8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 LMO7Q8WWI1 1683 aa8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 TULP1O00294 542 aaPredicted RBP8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 ZBTB24O43167 697 aaPredicted RBP8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 RALBP1Q15311 655 aa8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 CYP4X1Q8N118 509 aa8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 TMC1Q8TDI8 760 aa8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 CARD10Q9BWT7 1032 aa8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 PARP4Q9UKK3 1724 aaKnown RBP8.34□□□□□ -1.07
DEPDC4-209ENST00000550587 TTC21BQ7Z4L5 1316 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 MMP16P51512 607 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 Q3C1V9 767 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 ARHGEF25Q86VW2 580 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 CCDC102AQ96A19 550 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 TERF2IPQ9NYB0 399 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 RREB1Q92766 1687 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 NPC1L1Q9UHC9 1359 aa8.33□□□□□ -1.08
DEPDC4-209ENST00000550587 NUP188Q5SRE5 1749 aa8.32□□□□□ -1.08
DEPDC4-209ENST00000550587 HDGFL2Q7Z4V5 671 aaPredicted RBP8.32□□□□□ -1.08
DEPDC4-209ENST00000550587 CARD14Q9BXL6 1004 aa8.32□□□□□ -1.08
DEPDC4-209ENST00000550587 CPSF1Q10570 1443 aaKnown RBP8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 SLIT3O75094 1523 aa8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 C1QTNF8P60827 252 aa8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 GUCA2AQ02747 115 aa8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 TXNRD1Q16881 649 aa8.31□□□□□ -1.08
DEPDC4-209ENST00000550587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms