RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 DUSP27Q5VZP5 1158 aa14.63□□□□□ -0.07
RAB5B-208ENST00000550283 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
RAB5B-208ENST00000550283 CCDC24Q8N4L8 307 aa14.63□□□□□ -0.07
RAB5B-208ENST00000550283 C10orf71Q711Q0 1435 aa14.63□□□□□ -0.07
RAB5B-208ENST00000550283 AFDNP55196 1824 aaKnown RBP14.62□□□□□ -0.07
RAB5B-208ENST00000550283 UTRNP46939 3433 aa14.62□□□□□ -0.07
RAB5B-208ENST00000550283 NRXN2Q9P2S2 1712 aa14.61□□□□□ -0.07
RAB5B-208ENST00000550283 GNAI1P63096 354 aa14.61□□□□□ -0.07
RAB5B-208ENST00000550283 CHPF2Q9P2E5 772 aa14.61□□□□□ -0.07
RAB5B-208ENST00000550283 PXDNLA1KZ92 1463 aa14.61□□□□□ -0.07
RAB5B-208ENST00000550283 KIF13BQ9NQT8 1826 aa14.61□□□□□ -0.07
RAB5B-208ENST00000550283 A0A087WZG4 1122 aa14.6□□□□□ -0.07
RAB5B-208ENST00000550283 TCERG1O14776 1098 aaKnown RBP14.6□□□□□ -0.07
RAB5B-208ENST00000550283 YBX3P16989 372 aaKnown RBP eCLIP14.6□□□□□ -0.07
RAB5B-208ENST00000550283 FANCIQ9NVI1 1328 aa14.6□□□□□ -0.07
RAB5B-208ENST00000550283 SERPINB2P05120 415 aa14.59□□□□□ -0.07
RAB5B-208ENST00000550283 KCNA3P22001 575 aa14.59□□□□□ -0.07
RAB5B-208ENST00000550283 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
RAB5B-208ENST00000550283 HDGFL1Q5TGJ6 251 aa14.59□□□□□ -0.07
RAB5B-208ENST00000550283 ZBTB3Q9H5J0 574 aa14.59□□□□□ -0.07
RAB5B-208ENST00000550283 CD2APQ9Y5K6 639 aa14.59□□□□□ -0.07
RAB5B-208ENST00000550283 PARP3Q9Y6F1 533 aa14.59□□□□□ -0.07
RAB5B-208ENST00000550283 N4BP2Q86UW6 1770 aaPredicted RBP14.59□□□□□ -0.07
RAB5B-208ENST00000550283 A0A0G2JLW4 131 aa14.58□□□□□ -0.08
RAB5B-208ENST00000550283 XAGE3Q8WTP9 111 aa14.58□□□□□ -0.08
RAB5B-208ENST00000550283 ZNF428Q96B54 188 aa14.58□□□□□ -0.08
RAB5B-208ENST00000550283 IL16Q14005 1332 aa14.58□□□□□ -0.08
RAB5B-208ENST00000550283 DPEP1P16444 411 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 CHRNA5P30532 468 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
RAB5B-208ENST00000550283 AIMP1Q12904 312 aaKnown RBP14.57□□□□□ -0.08
RAB5B-208ENST00000550283 COPS6Q7L5N1 327 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 WDR63Q8IWG1 891 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 DDX21Q9NR30 783 aaKnown RBP eCLIP14.57□□□□□ -0.08
RAB5B-208ENST00000550283 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 MAP3K15Q6ZN16 1313 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 UBN2Q6ZU65 1347 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 ANKRD31Q8N7Z5 1873 aa14.57□□□□□ -0.08
RAB5B-208ENST00000550283 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
RAB5B-208ENST00000550283 PRR5LQ6MZQ0 368 aa14.56□□□□□ -0.08
RAB5B-208ENST00000550283 PHAXQ9H814 394 aaKnown RBP14.56□□□□□ -0.08
RAB5B-208ENST00000550283 FAM177BA6PVY3 158 aa14.55□□□□□ -0.08
RAB5B-208ENST00000550283 HOXB7P09629 217 aa14.55□□□□□ -0.08
RAB5B-208ENST00000550283 GPTP24298 496 aa14.55□□□□□ -0.08
RAB5B-208ENST00000550283 NUP98P52948 1817 aa14.55□□□□□ -0.08
RAB5B-208ENST00000550283 G2E3Q7L622 706 aa14.54□□□□□ -0.08
RAB5B-208ENST00000550283 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
RAB5B-208ENST00000550283 NIP7Q9Y221 180 aaKnown RBP eCLIP14.54□□□□□ -0.08
RAB5B-208ENST00000550283 COL11A2P13942 1736 aaPredicted RBP14.53□□□□□ -0.08
RAB5B-208ENST00000550283 ABCC12Q96J65 1359 aa14.53□□□□□ -0.08
RAB5B-208ENST00000550283 ERVV-1B6SEH8 477 aa14.53□□□□□ -0.08
RAB5B-208ENST00000550283 VAMP4O75379 141 aa14.53□□□□□ -0.08
RAB5B-208ENST00000550283 TWISTNBQ3B726 338 aaPredicted RBP14.53□□□□□ -0.08
RAB5B-208ENST00000550283 CLEC4GQ6UXB4 293 aa14.53□□□□□ -0.08
RAB5B-208ENST00000550283 TNRC6CQ9HCJ0 1690 aaKnown RBP14.52□□□□□ -0.08
RAB5B-208ENST00000550283 ATP10DQ9P241 1426 aa14.52□□□□□ -0.08
RAB5B-208ENST00000550283 SUSD4Q5VX71 490 aa14.52□□□□□ -0.09
RAB5B-208ENST00000550283 GIGYF2Q6Y7W6 1299 aaKnown RBP14.52□□□□□ -0.09
RAB5B-208ENST00000550283 KIF6Q6ZMV9 814 aa14.52□□□□□ -0.09
RAB5B-208ENST00000550283 NPM2Q86SE8 214 aaKnown RBP14.52□□□□□ -0.09
RAB5B-208ENST00000550283 SLC51AQ86UW1 340 aa14.52□□□□□ -0.09
RAB5B-208ENST00000550283 NUTM1Q86Y26 1132 aa14.52□□□□□ -0.09
RAB5B-208ENST00000550283 ZNF34Q8IZ26 560 aa14.52□□□□□ -0.09
RAB5B-208ENST00000550283 SYNE4Q8N205 404 aa14.52□□□□□ -0.09
RAB5B-208ENST00000550283 SETDB2Q96T68 719 aa14.52□□□□□ -0.09
RAB5B-208ENST00000550283 BRCA1P38398 1863 aaKnown RBP14.52□□□□□ -0.09
RAB5B-208ENST00000550283 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
RAB5B-208ENST00000550283 DBF4Q9UBU7 674 aaPredicted RBP14.51□□□□□ -0.09
RAB5B-208ENST00000550283 TGFB2P61812 414 aa14.5□□□□□ -0.09
RAB5B-208ENST00000550283 SLFN5Q08AF3 891 aa14.5□□□□□ -0.09
RAB5B-208ENST00000550283 GPR162Q16538 588 aa14.5□□□□□ -0.09
RAB5B-208ENST00000550283 NTSR2O95665 410 aa14.49□□□□□ -0.09
RAB5B-208ENST00000550283 ERFEQ4G0M1 354 aa14.49□□□□□ -0.09
RAB5B-208ENST00000550283 NBPF5PQ86XG9 351 aaPredicted RBP14.49□□□□□ -0.09
RAB5B-208ENST00000550283 CNBD1Q8NA66 436 aa14.49□□□□□ -0.09
RAB5B-208ENST00000550283 ZNF652Q9Y2D9 606 aa14.49□□□□□ -0.09
RAB5B-208ENST00000550283 CEP350Q5VT06 3117 aa14.49□□□□□ -0.09
RAB5B-208ENST00000550283 ADCY9O60503 1353 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 ARFGEF2Q9Y6D5 1785 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 ATP5J2-PTCD1G3V325 749 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 RGL2O15211 777 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 NLRP10Q86W26 655 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 C2CD5Q86YS7 1000 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 TRMT2AQ8IZ69 625 aaKnown RBP14.48□□□□□ -0.09
RAB5B-208ENST00000550283 HYPKQ9NX55 129 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 CHD4Q14839 1912 aa14.48□□□□□ -0.09
RAB5B-208ENST00000550283 ANKRD36CQ5JPF3 1778 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 DLEC1Q9Y238 1755 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 TCIRG1Q13488 830 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 CCDC30Q5VVM6 783 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 ANKRD13DQ6ZTN6 518 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 ISCA1Q9BUE6 129 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 BRIP1Q9BX63 1249 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 BCS1LQ9Y276 419 aa14.47□□□□□ -0.09
RAB5B-208ENST00000550283 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
RAB5B-208ENST00000550283 MYH16Q9H6N6 1097 aa14.46□□□□□ -0.09
RAB5B-208ENST00000550283 COL4A1P02462 1669 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms