RNA–Protein interactions for RNA: ENST00000549947.1

CNOT2-221, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-221ENST00000549947 LORP23490 312 aaPredicted RBP12.17□□□□□ -0.46
CNOT2-221ENST00000549947 LRRC69Q6ZNQ3 347 aa12.17□□□□□ -0.46
CNOT2-221ENST00000549947 FOXR1Q6PIV2 292 aa12.16□□□□□ -0.46
CNOT2-221ENST00000549947 CAPN12Q6ZSI9 719 aa12.16□□□□□ -0.46
CNOT2-221ENST00000549947 ZNF280CQ8ND82 737 aa12.16□□□□□ -0.46
CNOT2-221ENST00000549947 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
CNOT2-221ENST00000549947 QTRT2Q9H974 415 aaKnown RBP12.16□□□□□ -0.46
CNOT2-221ENST00000549947 DCDC2BA2VCK2 349 aa12.14□□□□□ -0.47
CNOT2-221ENST00000549947 ATXN7O15265 892 aaPredicted RBP12.14□□□□□ -0.47
CNOT2-221ENST00000549947 MKNK1Q9BUB5 465 aa12.14□□□□□ -0.47
CNOT2-221ENST00000549947 CFHR5Q9BXR6 569 aa12.14□□□□□ -0.47
CNOT2-221ENST00000549947 PCDHGC4Q9Y5F7 938 aa12.14□□□□□ -0.47
CNOT2-221ENST00000549947 GPC6Q9Y625 555 aaPredicted RBP12.14□□□□□ -0.47
CNOT2-221ENST00000549947 FIGNL1Q6PIW4 674 aa12.13□□□□□ -0.47
CNOT2-221ENST00000549947 SUSD3Q96L08 255 aa12.13□□□□□ -0.47
CNOT2-221ENST00000549947 GJA3Q9Y6H8 435 aa12.13□□□□□ -0.47
CNOT2-221ENST00000549947 ATP2B4P23634 1241 aa12.12□□□□□ -0.47
CNOT2-221ENST00000549947 SCNN1AP37088 669 aa12.12□□□□□ -0.47
CNOT2-221ENST00000549947 RTN1Q16799 776 aa12.12□□□□□ -0.47
CNOT2-221ENST00000549947 MBIPQ9NS73 344 aa12.12□□□□□ -0.47
CNOT2-221ENST00000549947 ATXN7L1Q9ULK2 861 aaPredicted RBP12.12□□□□□ -0.47
CNOT2-221ENST00000549947 BCS1LQ9Y276 419 aa12.12□□□□□ -0.47
CNOT2-221ENST00000549947 MAPTP10636 758 aaKnown RBP12.11□□□□□ -0.47
CNOT2-221ENST00000549947 TNP2Q05952 138 aa12.11□□□□□ -0.47
CNOT2-221ENST00000549947 SAMD5Q5TGI4 173 aa12.11□□□□□ -0.47
CNOT2-221ENST00000549947 KLK14Q9P0G3 267 aa12.11□□□□□ -0.47
CNOT2-221ENST00000549947 LRFN2Q9ULH4 789 aa12.11□□□□□ -0.47
CNOT2-221ENST00000549947 KHNYNO15037 678 aaKnown RBP12.1□□□□□ -0.47
CNOT2-221ENST00000549947 FAM157BP0CG42 384 aa12.1□□□□□ -0.47
CNOT2-221ENST00000549947 MX2P20592 715 aa12.1□□□□□ -0.47
CNOT2-221ENST00000549947 CTBSQ01459 385 aa12.1□□□□□ -0.47
CNOT2-221ENST00000549947 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
CNOT2-221ENST00000549947 STRN4Q9NRL3 753 aa12.1□□□□□ -0.47
CNOT2-221ENST00000549947 IGF1RP08069 1367 aa12.09□□□□□ -0.47
CNOT2-221ENST00000549947 C2CD2LO14523 706 aa12.09□□□□□ -0.47
CNOT2-221ENST00000549947 EFSO43281 561 aa12.09□□□□□ -0.47
CNOT2-221ENST00000549947 ADAMTS2O95450 1211 aa12.09□□□□□ -0.47
CNOT2-221ENST00000549947 FGFR3P22607 806 aa12.09□□□□□ -0.47
CNOT2-221ENST00000549947 RETREG2Q8NC44 543 aa12.09□□□□□ -0.47
CNOT2-221ENST00000549947 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
CNOT2-221ENST00000549947 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
CNOT2-221ENST00000549947 SLURP2P0DP57 97 aa12.08□□□□□ -0.48
CNOT2-221ENST00000549947 CD33P20138 364 aa12.08□□□□□ -0.48
CNOT2-221ENST00000549947 SRSF11Q05519 484 aaKnown RBP12.08□□□□□ -0.48
CNOT2-221ENST00000549947 DGKZQ13574 1117 aa12.08□□□□□ -0.48
CNOT2-221ENST00000549947 WHAMMQ8TF30 809 aa12.08□□□□□ -0.48
CNOT2-221ENST00000549947 MYO19Q96H55 970 aa12.08□□□□□ -0.48
CNOT2-221ENST00000549947 NEUROD4Q9HD90 331 aa12.08□□□□□ -0.48
CNOT2-221ENST00000549947 GRIN2CQ14957 1233 aa12.07□□□□□ -0.48
CNOT2-221ENST00000549947 COX20Q5RI15 118 aa12.07□□□□□ -0.48
CNOT2-221ENST00000549947 TYRO3Q06418 890 aa12.06□□□□□ -0.48
CNOT2-221ENST00000549947 NAA30Q147X3 362 aaPredicted RBP12.06□□□□□ -0.48
CNOT2-221ENST00000549947 PHLDB3Q6NSJ2 640 aa12.06□□□□□ -0.48
CNOT2-221ENST00000549947 SSFA2P28290 1259 aa12.05□□□□□ -0.48
CNOT2-221ENST00000549947 INSM1Q01101 510 aaPredicted RBP12.05□□□□□ -0.48
CNOT2-221ENST00000549947 ZSCAN1Q8NBB4 408 aa12.05□□□□□ -0.48
CNOT2-221ENST00000549947 COL26A1Q96A83 441 aa12.05□□□□□ -0.48
CNOT2-221ENST00000549947 ANKIB1Q9P2G1 1089 aa12.05□□□□□ -0.48
CNOT2-221ENST00000549947 SEPT3Q9UH03 358 aa12.05□□□□□ -0.48
CNOT2-221ENST00000549947 DMGDHQ9UI17 866 aaKnown RBP12.05□□□□□ -0.48
CNOT2-221ENST00000549947 USTQ9Y2C2 406 aa12.05□□□□□ -0.48
CNOT2-221ENST00000549947 SFSWAPQ12872 951 aaKnown RBP12.04□□□□□ -0.48
CNOT2-221ENST00000549947 BTLAQ7Z6A9 289 aa12.04□□□□□ -0.48
CNOT2-221ENST00000549947 TGFBR3LH3BV60 316 aa12.03□□□□□ -0.48
CNOT2-221ENST00000549947 FAM26DQ5JW98 314 aa12.03□□□□□ -0.48
CNOT2-221ENST00000549947 CEP63Q96MT8 703 aa12.03□□□□□ -0.48
CNOT2-221ENST00000549947 C11orf91Q3C1V1 193 aa12.02□□□□□ -0.49
CNOT2-221ENST00000549947 ZNF385CQ66K41 422 aaPredicted RBP12.02□□□□□ -0.49
CNOT2-221ENST00000549947 C16orf46Q6P387 395 aa12.02□□□□□ -0.49
CNOT2-221ENST00000549947 LYPD4Q6UWN0 246 aa12.02□□□□□ -0.49
CNOT2-221ENST00000549947 ACDQ96AP0 544 aa12.02□□□□□ -0.49
CNOT2-221ENST00000549947 BRD7Q9NPI1 651 aa12.02□□□□□ -0.49
CNOT2-221ENST00000549947 TNFRSF10BO14763 440 aa12.01□□□□□ -0.49
CNOT2-221ENST00000549947 BMP4P12644 408 aa12.01□□□□□ -0.49
CNOT2-221ENST00000549947 IER5Q5VY09 327 aa12.01□□□□□ -0.49
CNOT2-221ENST00000549947 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.01□□□□□ -0.497e-6■■■■■ 74.5
CNOT2-221ENST00000549947 MARK1Q9P0L2 795 aa12.01□□□□□ -0.49
CNOT2-221ENST00000549947 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
CNOT2-221ENST00000549947 GRNP28799 593 aaKnown RBP12□□□□□ -0.49
CNOT2-221ENST00000549947 HIF1AQ16665 826 aa12□□□□□ -0.49
CNOT2-221ENST00000549947 FAM182BQ5T319 152 aa12□□□□□ -0.49
CNOT2-221ENST00000549947 LAMC2Q13753 1193 aa11.99□□□□□ -0.49
CNOT2-221ENST00000549947 CELA2BP08218 269 aaPredicted RBP11.98□□□□□ -0.49
CNOT2-221ENST00000549947 MAP2K3P46734 347 aa11.98□□□□□ -0.49
CNOT2-221ENST00000549947 IDH3AP50213 366 aa11.98□□□□□ -0.49
CNOT2-221ENST00000549947 ETFBKMTQ8IXQ9 262 aa11.98□□□□□ -0.49
CNOT2-221ENST00000549947 IFT43Q96FT9 208 aa11.98□□□□□ -0.49
CNOT2-221ENST00000549947 SLC30A3Q99726 388 aa11.98□□□□□ -0.49
CNOT2-221ENST00000549947 NSFL1CQ9UNZ2 370 aaKnown RBP11.98□□□□□ -0.49
CNOT2-221ENST00000549947 KCNQ4P56696 695 aa11.97□□□□□ -0.49
CNOT2-221ENST00000549947 C1orf229Q6ZS94 237 aaPredicted RBP11.97□□□□□ -0.49
CNOT2-221ENST00000549947 OXCT2Q9BYC2 517 aaPredicted RBP11.97□□□□□ -0.49
CNOT2-221ENST00000549947 KLF15Q9UIH9 416 aa11.97□□□□□ -0.49
CNOT2-221ENST00000549947 MICAL2O94851 1124 aa11.96□□□□□ -0.49
CNOT2-221ENST00000549947 INPP5BP32019 993 aa11.96□□□□□ -0.49
CNOT2-221ENST00000549947 RAB44Q7Z6P3 723 aaPredicted RBP11.95□□□□□ -0.5
CNOT2-221ENST00000549947 TREML1Q86YW5 311 aa11.95□□□□□ -0.5
CNOT2-221ENST00000549947 SVOPQ8N4V2 548 aa11.95□□□□□ -0.5
CNOT2-221ENST00000549947 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
CNOT2-221ENST00000549947 USP20Q9Y2K6 914 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms