RNA–Protein interactions for RNA: ENST00000549302.1

ARL1-206, Transcript of ADP ribosylation factor like GTPase 1, human

TSL 3

Gene ARL1, Length 725 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL1-206	ENST00000549302	CEP350	Q5VT06	3117 aa		13.34	□□□□□ -0.27
ARL1-206	ENST00000549302	FAM208A	Q9UK61	1670 aa	Known RBP	13.34	□□□□□ -0.27
ARL1-206	ENST00000549302	GNPAT	O15228	680 aa		13.33	□□□□□ -0.28
ARL1-206	ENST00000549302	MMRN1	Q13201	1228 aa		13.33	□□□□□ -0.28
ARL1-206	ENST00000549302	TK2	O00142	265 aa		13.32	□□□□□ -0.28
ARL1-206	ENST00000549302	ATP6V1A	P38606	617 aa		13.32	□□□□□ -0.28
ARL1-206	ENST00000549302	ADGRD1	Q6QNK2	874 aa		13.32	□□□□□ -0.28
ARL1-206	ENST00000549302	QSER1	Q2KHR3	1735 aa		13.32	□□□□□ -0.28
ARL1-206	ENST00000549302	SHANK3	Q9BYB0	1731 aa		13.32	□□□□□ -0.28
ARL1-206	ENST00000549302	ADCY9	O60503	1353 aa		13.32	□□□□□ -0.28
ARL1-206	ENST00000549302	MMP10	P09238	476 aa		13.31	□□□□□ -0.28
ARL1-206	ENST00000549302	SMIM5	Q71RC9	77 aa		13.31	□□□□□ -0.28
ARL1-206	ENST00000549302	LINC00116	Q8NCU8	138 aa		13.31	□□□□□ -0.28
ARL1-206	ENST00000549302	DOT1L	Q8TEK3	1739 aa		13.3	□□□□□ -0.28
ARL1-206	ENST00000549302	APLP1	P51693	650 aa		13.3	□□□□□ -0.28
ARL1-206	ENST00000549302	C6orf132	Q5T0Z8	1188 aa		13.3	□□□□□ -0.28
ARL1-206	ENST00000549302	TRAPPC3L	Q5T215	181 aa		13.3	□□□□□ -0.28
ARL1-206	ENST00000549302	IFNL2	Q8IZJ0	200 aa		13.3	□□□□□ -0.28
ARL1-206	ENST00000549302	BCS1L	Q9Y276	419 aa		13.3	□□□□□ -0.28
ARL1-206	ENST00000549302	RTCB	Q9Y3I0	505 aa	Known RBP	13.3	□□□□□ -0.28
ARL1-206	ENST00000549302	EMILIN1	Q9Y6C2	1016 aa		13.3	□□□□□ -0.28
ARL1-206	ENST00000549302	MAP3K7	O43318	606 aa		13.29	□□□□□ -0.28
ARL1-206	ENST00000549302	TGFB2	P61812	414 aa		13.29	□□□□□ -0.28
ARL1-206	ENST00000549302	AMIGO3	Q86WK7	504 aa		13.29	□□□□□ -0.28
ARL1-206	ENST00000549302	NLGN1	Q8N2Q7	840 aa		13.29	□□□□□ -0.28
ARL1-206	ENST00000549302	ASAP1	Q9ULH1	1129 aa		13.29	□□□□□ -0.28
ARL1-206	ENST00000549302	PPP1R3G	B7ZBB8	358 aa		13.28	□□□□□ -0.28
ARL1-206	ENST00000549302	COL9A1	P20849	921 aa		13.28	□□□□□ -0.28
ARL1-206	ENST00000549302	OSBP	P22059	807 aa		13.28	□□□□□ -0.28
ARL1-206	ENST00000549302	MLLT3	P42568	568 aa	Predicted RBP	13.28	□□□□□ -0.28
ARL1-206	ENST00000549302	ARHGAP27	Q6ZUM4	889 aa		13.28	□□□□□ -0.28
ARL1-206	ENST00000549302	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.28	□□□□□ -0.28
ARL1-206	ENST00000549302	ZBED2	Q9BTP6	218 aa		13.28	□□□□□ -0.28
ARL1-206	ENST00000549302	LY75	O60449	1722 aa		13.27	□□□□□ -0.28
ARL1-206	ENST00000549302	TOMM70	O94826	608 aa		13.27	□□□□□ -0.29
ARL1-206	ENST00000549302	EYA1	Q99502	592 aa		13.27	□□□□□ -0.29
ARL1-206	ENST00000549302	SLC4A5	Q9BY07	1137 aa		13.27	□□□□□ -0.29
ARL1-206	ENST00000549302	CCDC87	Q9NVE4	849 aa		13.27	□□□□□ -0.29
ARL1-206	ENST00000549302	VPS9D1	Q9Y2B5	631 aa		13.27	□□□□□ -0.29
ARL1-206	ENST00000549302	COL24A1	Q17RW2	1714 aa		13.27	□□□□□ -0.29
ARL1-206	ENST00000549302		A0A0G2JLW4	131 aa		13.26	□□□□□ -0.29
ARL1-206	ENST00000549302	FCHSD2	O94868	740 aa		13.26	□□□□□ -0.29
ARL1-206	ENST00000549302	PHKG2	P15735	406 aa		13.26	□□□□□ -0.29
ARL1-206	ENST00000549302	RFC4	P35249	363 aa		13.26	□□□□□ -0.29
ARL1-206	ENST00000549302	ITPK1	Q13572	414 aa		13.26	□□□□□ -0.29
ARL1-206	ENST00000549302	WASHC2A	Q641Q2	1341 aa		13.26	□□□□□ -0.29
ARL1-206	ENST00000549302	ATG3	Q9NT62	314 aa		13.26	□□□□□ -0.29
ARL1-206	ENST00000549302	PARP3	Q9Y6F1	533 aa		13.26	□□□□□ -0.29
ARL1-206	ENST00000549302	SEMA3E	O15041	775 aa		13.25	□□□□□ -0.29
ARL1-206	ENST00000549302	HSP90AB1	P08238	724 aa	Known RBP	13.25	□□□□□ -0.29
ARL1-206	ENST00000549302	TSR1	Q2NL82	804 aa	Known RBP	13.25	□□□□□ -0.29
ARL1-206	ENST00000549302	CARD14	Q9BXL6	1004 aa		13.25	□□□□□ -0.29
ARL1-206	ENST00000549302	HR	O43593	1189 aa		13.24	□□□□□ -0.29
ARL1-206	ENST00000549302	TUBGCP6	Q96RT7	1819 aa		13.24	□□□□□ -0.29
ARL1-206	ENST00000549302	C4B	P0C0L5	1744 aa		13.23	□□□□□ -0.29
ARL1-206	ENST00000549302	ERVV-2	B6SEH9	535 aa		13.23	□□□□□ -0.29
ARL1-206	ENST00000549302	DPEP1	P16444	411 aa		13.23	□□□□□ -0.29
ARL1-206	ENST00000549302	RC3H1	Q5TC82	1133 aa	Known RBP	13.23	□□□□□ -0.29
ARL1-206	ENST00000549302	C5	P01031	1676 aa		13.22	□□□□□ -0.29
ARL1-206	ENST00000549302	TNNT2	P45379	298 aa	Predicted RBP	13.22	□□□□□ -0.29
ARL1-206	ENST00000549302	CABP4	P57796	275 aa		13.22	□□□□□ -0.29
ARL1-206	ENST00000549302	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.22	□□□□□ -0.29
ARL1-206	ENST00000549302	DCAF5	Q96JK2	942 aa		13.22	□□□□□ -0.29
ARL1-206	ENST00000549302	POLR3GL	Q9BT43	218 aa		13.22	□□□□□ -0.29
ARL1-206	ENST00000549302	RPS6KA4	O75676	772 aa		13.21	□□□□□ -0.29
ARL1-206	ENST00000549302	C9orf131	Q5VYM1	1079 aa		13.21	□□□□□ -0.29
ARL1-206	ENST00000549302	PIM2	Q9P1W9	311 aa		13.21	□□□□□ -0.29
ARL1-206	ENST00000549302	POLK	Q9UBT6	870 aa		13.21	□□□□□ -0.29
ARL1-206	ENST00000549302	GYS1	P13807	737 aa		13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	EIF4A2	Q14240	407 aa	Known RBP	13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	PROX2	Q3B8N5	592 aa		13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	AMOT	Q4VCS5	1084 aa		13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	DALRD3	Q5D0E6	543 aa	Known RBP	13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	C1orf141	Q5JVX7	400 aa		13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	RBM46	Q8TBY0	533 aa	Known RBP	13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	RNF166	Q96A37	237 aa	Predicted RBP	13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	NMRK2	Q9NPI5	230 aa		13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	PXDNL	A1KZ92	1463 aa		13.2	□□□□□ -0.3
ARL1-206	ENST00000549302	KDM2B	Q8NHM5	1336 aa		13.19	□□□□□ -0.3
ARL1-206	ENST00000549302	CNTNAP4	Q9C0A0	1308 aa		13.19	□□□□□ -0.3
ARL1-206	ENST00000549302	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.19	□□□□□ -0.3
ARL1-206	ENST00000549302	NCAPD2	Q15021	1401 aa		13.19	□□□□□ -0.3
ARL1-206	ENST00000549302	PTCD1	O75127	700 aa	Known RBP	13.18	□□□□□ -0.3
ARL1-206	ENST00000549302	MTHFS	P49914	203 aa		13.18	□□□□□ -0.3
ARL1-206	ENST00000549302	FSTL1	Q12841	308 aa		13.18	□□□□□ -0.3
ARL1-206	ENST00000549302	PLEKHG2	Q9H7P9	1386 aa		13.18	□□□□□ -0.3
ARL1-206	ENST00000549302	RGPD2	P0DJD1	1756 aa		13.17	□□□□□ -0.3
ARL1-206	ENST00000549302	C10orf71	Q711Q0	1435 aa		13.17	□□□□□ -0.3
ARL1-206	ENST00000549302	DNAJC5G	Q8N7S2	189 aa		13.17	□□□□□ -0.3
ARL1-206	ENST00000549302	RNF181	Q9P0P0	153 aa		13.17	□□□□□ -0.3
ARL1-206	ENST00000549302	TESPA1	A2RU30	521 aa	Predicted RBP	13.16	□□□□□ -0.3
ARL1-206	ENST00000549302	SLC4A9	Q96Q91	983 aa		13.16	□□□□□ -0.3
ARL1-206	ENST00000549302	CDHR5	Q9HBB8	845 aa		13.16	□□□□□ -0.3
ARL1-206	ENST00000549302	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.15	□□□□□ -0.3
ARL1-206	ENST00000549302	ZPR1	O75312	459 aa		13.15	□□□□□ -0.3
ARL1-206	ENST00000549302	CRKL	P46109	303 aa	Known RBP	13.15	□□□□□ -0.3
ARL1-206	ENST00000549302	KLRG1	Q96E93	195 aa		13.15	□□□□□ -0.3
ARL1-206	ENST00000549302	KDR	P35968	1356 aa		13.15	□□□□□ -0.3
ARL1-206	ENST00000549302	CIC	Q96RK0	1608 aa	Predicted RBP	13.14	□□□□□ -0.31
ARL1-206	ENST00000549302	SRP68	Q9UHB9	627 aa	Known RBP	13.14	□□□□□ -0.31

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