RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 WEE1P30291 646 aa9.7□□□□□ -0.86
USP15-213ENST00000549268 ABHD17AQ96GS6 310 aa9.7□□□□□ -0.86
USP15-213ENST00000549268 FGFR3P22607 806 aa9.69□□□□□ -0.86
USP15-213ENST00000549268 SWI5Q1ZZU3 235 aa9.69□□□□□ -0.86
USP15-213ENST00000549268 FAM182BQ5T319 152 aa9.69□□□□□ -0.86
USP15-213ENST00000549268 GJA3Q9Y6H8 435 aa9.69□□□□□ -0.86
USP15-213ENST00000549268 ARHGEF15O94989 841 aa9.68□□□□□ -0.86
USP15-213ENST00000549268 TNP2Q05952 138 aa9.68□□□□□ -0.86
USP15-213ENST00000549268 LAMC2Q13753 1193 aa9.68□□□□□ -0.86
USP15-213ENST00000549268 WHAMMQ8TF30 809 aa9.68□□□□□ -0.86
USP15-213ENST00000549268 PHACTR1Q9C0D0 580 aa9.68□□□□□ -0.86
USP15-213ENST00000549268 HCN4Q9Y3Q4 1203 aa9.68□□□□□ -0.86
USP15-213ENST00000549268 CELA2BP08218 269 aaPredicted RBP9.67□□□□□ -0.86
USP15-213ENST00000549268 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
USP15-213ENST00000549268 ALDH16A1Q8IZ83 802 aa9.67□□□□□ -0.86
USP15-213ENST00000549268 SVOPQ8N4V2 548 aa9.67□□□□□ -0.86
USP15-213ENST00000549268 RHPN1Q8TCX5 695 aa9.67□□□□□ -0.86
USP15-213ENST00000549268 ANKIB1Q9P2G1 1089 aa9.67□□□□□ -0.86
USP15-213ENST00000549268 ZMIZ1Q9ULJ6 1067 aa9.67□□□□□ -0.86
USP15-213ENST00000549268 EFSO43281 561 aa9.66□□□□□ -0.86
USP15-213ENST00000549268 FOXO3O43524 673 aa9.66□□□□□ -0.86
USP15-213ENST00000549268 MAPTP10636 758 aaKnown RBP9.66□□□□□ -0.86
USP15-213ENST00000549268 HIF1AQ16665 826 aa9.66□□□□□ -0.86
USP15-213ENST00000549268 ACDQ96AP0 544 aa9.66□□□□□ -0.86
USP15-213ENST00000549268 NEUROD4Q9HD90 331 aa9.66□□□□□ -0.86
USP15-213ENST00000549268 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.86
USP15-213ENST00000549268 LRRC69Q6ZNQ3 347 aa9.65□□□□□ -0.86
USP15-213ENST00000549268 CHMP7Q8WUX9 453 aaPredicted RBP9.65□□□□□ -0.86
USP15-213ENST00000549268 KLRG1Q96E93 195 aa9.65□□□□□ -0.86
USP15-213ENST00000549268 C2CD2LO14523 706 aa9.64□□□□□ -0.87
USP15-213ENST00000549268 BCRP11274 1271 aa9.64□□□□□ -0.87
USP15-213ENST00000549268 BMP4P12644 408 aa9.64□□□□□ -0.87
USP15-213ENST00000549268 CTBSQ01459 385 aa9.64□□□□□ -0.87
USP15-213ENST00000549268 MAP3K10Q02779 954 aa9.64□□□□□ -0.87
USP15-213ENST00000549268 OXCT2Q9BYC2 517 aaPredicted RBP9.64□□□□□ -0.87
USP15-213ENST00000549268 ENAMQ9NRM1 1142 aa9.64□□□□□ -0.87
USP15-213ENST00000549268 GDF2Q9UK05 429 aaPredicted RBP9.64□□□□□ -0.87
USP15-213ENST00000549268 HCN2Q9UL51 889 aa9.64□□□□□ -0.87
USP15-213ENST00000549268 KHNYNO15037 678 aaKnown RBP9.63□□□□□ -0.87
USP15-213ENST00000549268 PDIA4P13667 645 aaKnown RBP9.63□□□□□ -0.87
USP15-213ENST00000549268 PDE4CQ08493 712 aa9.63□□□□□ -0.87
USP15-213ENST00000549268 RTN1Q16799 776 aa9.63□□□□□ -0.87
USP15-213ENST00000549268 RETREG2Q8NC44 543 aa9.63□□□□□ -0.87
USP15-213ENST00000549268 AVENQ9NQS1 362 aaPredicted RBP9.63□□□□□ -0.87
USP15-213ENST00000549268 ADAMTS8Q9UP79 889 aa9.63□□□□□ -0.87
USP15-213ENST00000549268 DCDC2BA2VCK2 349 aa9.62□□□□□ -0.87
USP15-213ENST00000549268 ARAFP10398 606 aa9.62□□□□□ -0.87
USP15-213ENST00000549268 GOLGA6L1Q8N7Z2 621 aa9.62□□□□□ -0.87
USP15-213ENST00000549268 STK32AQ8WU08 396 aa9.62□□□□□ -0.87
USP15-213ENST00000549268 SUSD3Q96L08 255 aa9.62□□□□□ -0.87
USP15-213ENST00000549268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.62□□□□□ -0.879e-10■■■■■ 86.9
USP15-213ENST00000549268 MARK1Q9P0L2 795 aa9.62□□□□□ -0.87
USP15-213ENST00000549268 OIP5O43482 229 aa9.61□□□□□ -0.87
USP15-213ENST00000549268 IER5Q5VY09 327 aa9.61□□□□□ -0.87
USP15-213ENST00000549268 LGR5O75473 907 aa9.6□□□□□ -0.87
USP15-213ENST00000549268 KCNQ4P56696 695 aa9.6□□□□□ -0.87
USP15-213ENST00000549268 OCLNQ16625 522 aa9.6□□□□□ -0.87
USP15-213ENST00000549268 MYO19Q96H55 970 aa9.6□□□□□ -0.87
USP15-213ENST00000549268 CD33P20138 364 aa9.59□□□□□ -0.87
USP15-213ENST00000549268 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
USP15-213ENST00000549268 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
USP15-213ENST00000549268 CLP1Q92989 425 aaKnown RBP9.59□□□□□ -0.87
USP15-213ENST00000549268 ZNF280CQ8ND82 737 aa9.58□□□□□ -0.88
USP15-213ENST00000549268 COL26A1Q96A83 441 aa9.58□□□□□ -0.88
USP15-213ENST00000549268 VTI1AQ96AJ9 217 aa9.58□□□□□ -0.88
USP15-213ENST00000549268 NGLY1Q96IV0 654 aa9.58□□□□□ -0.88
USP15-213ENST00000549268 HSH2DQ96JZ2 352 aa9.58□□□□□ -0.88
USP15-213ENST00000549268 STRN4Q9NRL3 753 aa9.58□□□□□ -0.88
USP15-213ENST00000549268 TYRO3Q06418 890 aa9.57□□□□□ -0.88
USP15-213ENST00000549268 ZNF468Q5VIY5 522 aaPredicted RBP9.57□□□□□ -0.88
USP15-213ENST00000549268 CEP63Q96MT8 703 aa9.57□□□□□ -0.88
USP15-213ENST00000549268 QTRT2Q9H974 415 aaKnown RBP9.57□□□□□ -0.88
USP15-213ENST00000549268 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
USP15-213ENST00000549268 TGFBR3LH3BV60 316 aa9.56□□□□□ -0.88
USP15-213ENST00000549268 ADH6P28332 368 aa9.56□□□□□ -0.88
USP15-213ENST00000549268 FKBP5Q13451 457 aaPredicted RBP9.56□□□□□ -0.88
USP15-213ENST00000549268 BTLAQ7Z6A9 289 aa9.56□□□□□ -0.88
USP15-213ENST00000549268 PRIMPOLQ96LW4 560 aa9.56□□□□□ -0.88
USP15-213ENST00000549268 BRD7Q9NPI1 651 aa9.56□□□□□ -0.88
USP15-213ENST00000549268 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
USP15-213ENST00000549268 USTQ9Y2C2 406 aa9.56□□□□□ -0.88
USP15-213ENST00000549268 PRMT3O60678 531 aa9.55□□□□□ -0.88
USP15-213ENST00000549268 SFSWAPQ12872 951 aaKnown RBP9.55□□□□□ -0.88
USP15-213ENST00000549268 C1orf229Q6ZS94 237 aaPredicted RBP9.55□□□□□ -0.88
USP15-213ENST00000549268 GALNT6Q8NCL4 622 aa9.55□□□□□ -0.88
USP15-213ENST00000549268 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
USP15-213ENST00000549268 CXXC1Q9P0U4 656 aaPredicted RBP9.55□□□□□ -0.88
USP15-213ENST00000549268 DMGDHQ9UI17 866 aaKnown RBP9.55□□□□□ -0.88
USP15-213ENST00000549268 BCS1LQ9Y276 419 aa9.55□□□□□ -0.88
USP15-213ENST00000549268 RNF225M0QZC1 329 aaPredicted RBP9.54□□□□□ -0.88
USP15-213ENST00000549268 EPXP11678 715 aa9.54□□□□□ -0.88
USP15-213ENST00000549268 MARSP56192 900 aaKnown RBP9.54□□□□□ -0.88
USP15-213ENST00000549268 KCNMA1Q12791 1236 aa9.54□□□□□ -0.88
USP15-213ENST00000549268 C11orf91Q3C1V1 193 aa9.54□□□□□ -0.88
USP15-213ENST00000549268 SCARF2Q96GP6 870 aaPredicted RBP9.54□□□□□ -0.88
USP15-213ENST00000549268 EFCC1Q9HA90 598 aa9.54□□□□□ -0.88
USP15-213ENST00000549268 KLF15Q9UIH9 416 aa9.54□□□□□ -0.88
USP15-213ENST00000549268 PRR12Q9ULL5 1215 aa9.54□□□□□ -0.88
USP15-213ENST00000549268 KCNH4Q9UQ05 1017 aa9.54□□□□□ -0.88
USP15-213ENST00000549268 NEDD1Q8NHV4 660 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms