RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
HDAC7-228ENST00000548938 ZHX1Q9UKY1 873 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-228ENST00000548938 PHF8Q9UPP1 1060 aa16.45■□□□□ 0.22
HDAC7-228ENST00000548938 KIAA1524Q8TCG1 905 aa16.44■□□□□ 0.22
HDAC7-228ENST00000548938 ZSCAN20P17040 1043 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-228ENST00000548938 CASTP20810 708 aaKnown RBP16.44■□□□□ 0.22
HDAC7-228ENST00000548938 CWC27Q6UX04 472 aaKnown RBP16.44■□□□□ 0.22
HDAC7-228ENST00000548938 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
HDAC7-228ENST00000548938 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
HDAC7-228ENST00000548938 SPC24Q8NBT2 197 aa16.44■□□□□ 0.22
HDAC7-228ENST00000548938 RHPN1Q8TCX5 695 aa16.44■□□□□ 0.22
HDAC7-228ENST00000548938 ATP6V1DQ9Y5K8 247 aa16.44■□□□□ 0.22
HDAC7-228ENST00000548938 NLRP6P59044 892 aa16.43■□□□□ 0.22
HDAC7-228ENST00000548938 CBX1P83916 185 aa16.43■□□□□ 0.22
HDAC7-228ENST00000548938 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
HDAC7-228ENST00000548938 KDRP35968 1356 aa16.43■□□□□ 0.22
HDAC7-228ENST00000548938 GJB2P29033 226 aa16.43■□□□□ 0.22
HDAC7-228ENST00000548938 DMTNQ08495 405 aa16.43■□□□□ 0.22
HDAC7-228ENST00000548938 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
HDAC7-228ENST00000548938 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
HDAC7-228ENST00000548938 ATP2B3Q16720 1220 aa16.42■□□□□ 0.22
HDAC7-228ENST00000548938 NUTM2GQ5VZR2 741 aa16.42■□□□□ 0.22
HDAC7-228ENST00000548938 EYA1Q99502 592 aa16.42■□□□□ 0.22
HDAC7-228ENST00000548938 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
HDAC7-228ENST00000548938 CNTROBQ8N137 903 aa16.42■□□□□ 0.22
HDAC7-228ENST00000548938 HYPKQ9NX55 129 aa16.42■□□□□ 0.22
HDAC7-228ENST00000548938 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
HDAC7-228ENST00000548938 RAB11FIP3O75154 756 aa16.41■□□□□ 0.22
HDAC7-228ENST00000548938 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
HDAC7-228ENST00000548938 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
HDAC7-228ENST00000548938 POLA2Q14181 598 aa16.41■□□□□ 0.22
HDAC7-228ENST00000548938 ESCO1Q5FWF5 840 aa16.41■□□□□ 0.22
HDAC7-228ENST00000548938 N4BP2Q86UW6 1770 aaPredicted RBP16.41■□□□□ 0.22
HDAC7-228ENST00000548938 FLT4P35916 1363 aa16.4■□□□□ 0.22
HDAC7-228ENST00000548938 VPS37CA5D8V6 355 aaPredicted RBP16.4■□□□□ 0.22
HDAC7-228ENST00000548938 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
HDAC7-228ENST00000548938 ABTB2Q8N961 1025 aa16.4■□□□□ 0.22
HDAC7-228ENST00000548938 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
HDAC7-228ENST00000548938 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
HDAC7-228ENST00000548938 ST3GAL1Q11201 340 aa16.4■□□□□ 0.22
HDAC7-228ENST00000548938 ADCK5Q3MIX3 580 aa16.4■□□□□ 0.22
HDAC7-228ENST00000548938 UTP14CQ5TAP6 766 aaKnown RBP16.39■□□□□ 0.22
HDAC7-228ENST00000548938 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.22
HDAC7-228ENST00000548938 KIF1BPQ96EK5 621 aa16.39■□□□□ 0.22
HDAC7-228ENST00000548938 JAKMIP1Q96N16 626 aaKnown RBP16.39■□□□□ 0.22
HDAC7-228ENST00000548938 NWD1Q149M9 1564 aa16.39■□□□□ 0.21
HDAC7-228ENST00000548938 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
HDAC7-228ENST00000548938 PTH1RQ03431 593 aa16.39■□□□□ 0.21
HDAC7-228ENST00000548938 CCDC192P0DO97 292 aa16.39■□□□□ 0.21
HDAC7-228ENST00000548938 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
HDAC7-228ENST00000548938 DIAPH3Q9NSV4 1193 aa16.38■□□□□ 0.21
HDAC7-228ENST00000548938 PDRG1Q9NUG6 133 aa16.38■□□□□ 0.21
HDAC7-228ENST00000548938 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
HDAC7-228ENST00000548938 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
HDAC7-228ENST00000548938 NBPF7P0C2Y1 421 aaPredicted RBP16.38■□□□□ 0.21
HDAC7-228ENST00000548938 CHAF1AQ13111 956 aaPredicted RBP16.38■□□□□ 0.21
HDAC7-228ENST00000548938 HDGFL1Q5TGJ6 251 aa16.38■□□□□ 0.21
HDAC7-228ENST00000548938 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
HDAC7-228ENST00000548938 PDCL2Q8N4E4 241 aa16.38■□□□□ 0.21
HDAC7-228ENST00000548938 PTGS1P23219 599 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 AMPHP49418 695 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 ORAI2Q96SN7 254 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 TPM3P06753 285 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 HSPA2P54652 639 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 IL17REQ8NFR9 667 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
HDAC7-228ENST00000548938 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 GOLGA6L6A8MZA4 724 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 PSME1Q06323 249 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 ME3Q16798 604 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 HTATSF1O43719 755 aaKnown RBP16.36■□□□□ 0.21
HDAC7-228ENST00000548938 CAMK4Q16566 473 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 FAM200AQ8TCP9 573 aa16.36■□□□□ 0.21
HDAC7-228ENST00000548938 LIG1P18858 919 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 LUZP1Q86V48 1076 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 KLHL34Q8N239 644 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 ANKRD7Q92527 254 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 SH2B1Q9NRF2 756 aaPredicted RBP16.35■□□□□ 0.21
HDAC7-228ENST00000548938 MRVI1Q9Y6F6 885 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 CACNA1FO60840 1977 aa16.35■□□□□ 0.21
HDAC7-228ENST00000548938 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
HDAC7-228ENST00000548938 U2AF2P26368 475 aaKnown RBP eCLIP16.34■□□□□ 0.21
HDAC7-228ENST00000548938 TYRO3Q06418 890 aa16.34■□□□□ 0.21
HDAC7-228ENST00000548938 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
HDAC7-228ENST00000548938 CDC37L1Q7L3B6 337 aa16.34■□□□□ 0.21
HDAC7-228ENST00000548938 ZSCAN31Q96LW9 406 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-228ENST00000548938 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
HDAC7-228ENST00000548938 GLRX3O76003 335 aaKnown RBP16.34■□□□□ 0.21
HDAC7-228ENST00000548938 COL9A3Q14050 684 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-228ENST00000548938 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.21
HDAC7-228ENST00000548938 CTIFO43310 598 aaKnown RBP16.33■□□□□ 0.21
HDAC7-228ENST00000548938 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms