RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ZDHHC9Q9Y397 364 aa16.87■□□□□ 0.29
CACNB3-209ENST00000548860 ARAP3Q8WWN8 1544 aa16.87■□□□□ 0.29
CACNB3-209ENST00000548860 LRRC7Q96NW7 1537 aa16.87■□□□□ 0.29
CACNB3-209ENST00000548860 TSPOAP1O95153 1857 aa16.87■□□□□ 0.29
CACNB3-209ENST00000548860 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
CACNB3-209ENST00000548860 KRT85P78386 507 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 BICC1Q9H694 974 aaKnown RBP16.86■□□□□ 0.29
CACNB3-209ENST00000548860 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 A0A087WWV3 80 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 ZSCAN22P10073 491 aaPredicted RBP16.86■□□□□ 0.29
CACNB3-209ENST00000548860 EVA1CP58658 441 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 CCDC82Q8N4S0 544 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 GOLIM4O00461 696 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 CPLX1O14810 134 aa16.86■□□□□ 0.29
CACNB3-209ENST00000548860 CABP4P57796 275 aa16.85■□□□□ 0.29
CACNB3-209ENST00000548860 HDAC5Q9UQL6 1122 aa16.85■□□□□ 0.29
CACNB3-209ENST00000548860 LARGE1O95461 756 aa16.85■□□□□ 0.29
CACNB3-209ENST00000548860 SLFNL1Q499Z3 407 aa16.85■□□□□ 0.29
CACNB3-209ENST00000548860 IQSEC2Q5JU85 1478 aa16.85■□□□□ 0.29
CACNB3-209ENST00000548860 ME1P48163 572 aa16.85■□□□□ 0.29
CACNB3-209ENST00000548860 IGSF3O75054 1194 aa16.84■□□□□ 0.29
CACNB3-209ENST00000548860 TLR7Q9NYK1 1049 aaKnown RBP16.84■□□□□ 0.29
CACNB3-209ENST00000548860 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
CACNB3-209ENST00000548860 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
CACNB3-209ENST00000548860 NUP62CLQ9H1M0 184 aa16.84■□□□□ 0.29
CACNB3-209ENST00000548860 CHGBP05060 677 aa16.84■□□□□ 0.29
CACNB3-209ENST00000548860 PSMA5P28066 241 aa16.84■□□□□ 0.29
CACNB3-209ENST00000548860 BRF1Q92994 677 aa16.84■□□□□ 0.29
CACNB3-209ENST00000548860 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
CACNB3-209ENST00000548860 TATP17735 454 aaPredicted RBP16.83■□□□□ 0.29
CACNB3-209ENST00000548860 ANKLE2Q86XL3 938 aa16.83■□□□□ 0.29
CACNB3-209ENST00000548860 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.83■□□□□ 0.29
CACNB3-209ENST00000548860 CCDC183Q5T5S1 534 aa16.83■□□□□ 0.28
CACNB3-209ENST00000548860 BIN1O00499 593 aa16.83■□□□□ 0.28
CACNB3-209ENST00000548860 ATF3P18847 181 aa16.83■□□□□ 0.28
CACNB3-209ENST00000548860 CCDC192P0DO97 292 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 TIMM10P62072 90 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 RRP12Q5JTH9 1297 aaKnown RBP16.82■□□□□ 0.28
CACNB3-209ENST00000548860 C16orf45Q96MC5 204 aaPredicted RBP16.82■□□□□ 0.28
CACNB3-209ENST00000548860 MTMR7Q9Y216 660 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 CCDC144CPQ8IYA2 1237 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 NLRP1Q9C000 1473 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 GRM8O00222 908 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 SGSM2O43147 1006 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 GCP02774 474 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 TPM2P07951 284 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 CBX1P83916 185 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 LUZP1Q86V48 1076 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 SUCLG2Q96I99 432 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 DACT1Q9NYF0 836 aa16.82■□□□□ 0.28
CACNB3-209ENST00000548860 SPDYE4A6NLX3 237 aa16.81■□□□□ 0.28
CACNB3-209ENST00000548860 TRMT1Q9NXH9 659 aaKnown RBP16.81■□□□□ 0.28
CACNB3-209ENST00000548860 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
CACNB3-209ENST00000548860 F13A1P00488 732 aa16.81■□□□□ 0.28
CACNB3-209ENST00000548860 GPTP24298 496 aa16.81■□□□□ 0.28
CACNB3-209ENST00000548860 MAP3K5Q99683 1374 aa16.81■□□□□ 0.28
CACNB3-209ENST00000548860 NRXN1Q9ULB1 1477 aa16.81■□□□□ 0.28
CACNB3-209ENST00000548860 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-209ENST00000548860 HSP90AA4PQ58FG1 418 aa16.81■□□□□ 0.28
CACNB3-209ENST00000548860 FAM177A1Q8N128 213 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-209ENST00000548860 ZKSCAN5Q9Y2L8 839 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 JAK2O60674 1132 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 CCDC73Q6ZRK6 1079 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 RUFY3Q7L099 469 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 ERC1Q8IUD2 1116 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 SIGLEC1Q9BZZ2 1709 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 BRD1O95696 1058 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 EIF4A1P60842 406 aaKnown RBP16.8■□□□□ 0.28
CACNB3-209ENST00000548860 TPD52L1Q16890 204 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-209ENST00000548860 CREB3L3Q68CJ9 461 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 LMBR1LQ6UX01 489 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 KRT28Q7Z3Y7 464 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
CACNB3-209ENST00000548860 EAF2Q96CJ1 260 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-209ENST00000548860 ZMYND15Q9H091 742 aa16.8■□□□□ 0.28
CACNB3-209ENST00000548860 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
CACNB3-209ENST00000548860 MAP3K11Q16584 847 aa16.79■□□□□ 0.28
CACNB3-209ENST00000548860 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-209ENST00000548860 TFCP2Q12800 502 aa16.79■□□□□ 0.28
CACNB3-209ENST00000548860 OTUD7BQ6GQQ9 843 aa16.79■□□□□ 0.28
CACNB3-209ENST00000548860 NFXL1Q6ZNB6 911 aa16.79■□□□□ 0.28
CACNB3-209ENST00000548860 NCOA5Q9HCD5 579 aaKnown RBP16.79■□□□□ 0.28
CACNB3-209ENST00000548860 LARP1Q6PKG0 1096 aaKnown RBP16.78■□□□□ 0.28
CACNB3-209ENST00000548860 KSR2Q6VAB6 950 aa16.78■□□□□ 0.28
CACNB3-209ENST00000548860 HTATSF1O43719 755 aaKnown RBP16.78■□□□□ 0.28
CACNB3-209ENST00000548860 ME3Q16798 604 aa16.78■□□□□ 0.28
CACNB3-209ENST00000548860 CDC37L1Q7L3B6 337 aa16.78■□□□□ 0.28
CACNB3-209ENST00000548860 EVI5LQ96CN4 794 aa16.78■□□□□ 0.28
CACNB3-209ENST00000548860 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.78■□□□□ 0.28
CACNB3-209ENST00000548860 V9GYY5 206 aaPredicted RBP16.78■□□□□ 0.28
CACNB3-209ENST00000548860 RRP9O43818 475 aaKnown RBP16.78■□□□□ 0.28
CACNB3-209ENST00000548860 ZNF445P59923 1031 aa16.78■□□□□ 0.28
CACNB3-209ENST00000548860 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
CACNB3-209ENST00000548860 BRPF1P55201 1214 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-209ENST00000548860 UBE2HP62256 183 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms