RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 SNRPA1P09661 255 aaKnown RBP20.29■□□□□ 0.84
SNX29P1-201ENST00000548357 CNBD1Q8NA66 436 aa20.29■□□□□ 0.84
SNX29P1-201ENST00000548357 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
SNX29P1-201ENST00000548357 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
SNX29P1-201ENST00000548357 PLEKHF1Q96S99 279 aa20.28■□□□□ 0.84
SNX29P1-201ENST00000548357 POTECB2RU33 542 aa20.27■□□□□ 0.84
SNX29P1-201ENST00000548357 PDE6BP35913 854 aa20.27■□□□□ 0.84
SNX29P1-201ENST00000548357 GLTPD2A6NH11 291 aa20.26■□□□□ 0.83
SNX29P1-201ENST00000548357 SRGNP10124 158 aa20.26■□□□□ 0.83
SNX29P1-201ENST00000548357 HLFQ16534 295 aa20.26■□□□□ 0.83
SNX29P1-201ENST00000548357 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
SNX29P1-201ENST00000548357 ZC3H4Q9UPT8 1303 aaKnown RBP20.26■□□□□ 0.83
SNX29P1-201ENST00000548357 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
SNX29P1-201ENST00000548357 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
SNX29P1-201ENST00000548357 PRPF40BQ6NWY9 871 aaKnown RBP20.25■□□□□ 0.83
SNX29P1-201ENST00000548357 FAM177BA6PVY3 158 aa20.24■□□□□ 0.83
SNX29P1-201ENST00000548357 OLFM4Q6UX06 510 aa20.24■□□□□ 0.83
SNX29P1-201ENST00000548357 LAMB2P55268 1798 aa20.23■□□□□ 0.83
SNX29P1-201ENST00000548357 ANKRD36CQ5JPF3 1778 aa20.23■□□□□ 0.83
SNX29P1-201ENST00000548357 ST5P78524 1137 aa20.23■□□□□ 0.83
SNX29P1-201ENST00000548357 FSTL1Q12841 308 aa20.23■□□□□ 0.83
SNX29P1-201ENST00000548357 NBPF5PQ86XG9 351 aaPredicted RBP20.23■□□□□ 0.83
SNX29P1-201ENST00000548357 ABCC12Q96J65 1359 aa20.22■□□□□ 0.83
SNX29P1-201ENST00000548357 NPHP1O15259 732 aa20.22■□□□□ 0.83
SNX29P1-201ENST00000548357 IFFO2Q5TF58 517 aa20.22■□□□□ 0.83
SNX29P1-201ENST00000548357 STYK1Q6J9G0 422 aa20.22■□□□□ 0.83
SNX29P1-201ENST00000548357 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
SNX29P1-201ENST00000548357 CLEC4GQ6UXB4 293 aa20.21■□□□□ 0.83
SNX29P1-201ENST00000548357 SLC51AQ86UW1 340 aa20.21■□□□□ 0.83
SNX29P1-201ENST00000548357 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
SNX29P1-201ENST00000548357 C7orf43Q8WVR3 580 aa20.21■□□□□ 0.83
SNX29P1-201ENST00000548357 MASTLQ96GX5 879 aa20.21■□□□□ 0.83
SNX29P1-201ENST00000548357 PDZRN3Q9UPQ7 1066 aa20.21■□□□□ 0.83
SNX29P1-201ENST00000548357 NIP7Q9Y221 180 aaKnown RBP eCLIP20.21■□□□□ 0.83
SNX29P1-201ENST00000548357 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
SNX29P1-201ENST00000548357 NFE2L2Q16236 605 aa20.2■□□□□ 0.82
SNX29P1-201ENST00000548357 TTLL7Q6ZT98 887 aa20.2■□□□□ 0.82
SNX29P1-201ENST00000548357 LTBP3Q9NS15 1303 aa20.2■□□□□ 0.82
SNX29P1-201ENST00000548357 SCN4AP35499 1836 aa20.2■□□□□ 0.82
SNX29P1-201ENST00000548357 ERFEQ4G0M1 354 aa20.19■□□□□ 0.82
SNX29P1-201ENST00000548357 CNKSR1Q969H4 720 aa20.19■□□□□ 0.82
SNX29P1-201ENST00000548357 TAOK3Q9H2K8 898 aa20.19■□□□□ 0.82
SNX29P1-201ENST00000548357 TAF1P21675 1872 aa20.19■□□□□ 0.82
SNX29P1-201ENST00000548357 KLRG2A4D1S0 409 aaPredicted RBP20.18■□□□□ 0.82
SNX29P1-201ENST00000548357 VEGFAP15692 232 aaPredicted RBP20.18■□□□□ 0.82
SNX29P1-201ENST00000548357 SMC1BQ8NDV3 1235 aa20.18■□□□□ 0.82
SNX29P1-201ENST00000548357 ZNF652Q9Y2D9 606 aa20.18■□□□□ 0.82
SNX29P1-201ENST00000548357 COL4A5P29400 1685 aa20.18■□□□□ 0.82
SNX29P1-201ENST00000548357 SNED1Q8TER0 1413 aa20.18■□□□□ 0.82
SNX29P1-201ENST00000548357 POTEIP0CG38 1075 aa20.17■□□□□ 0.82
SNX29P1-201ENST00000548357 POTEJP0CG39 1038 aa20.17■□□□□ 0.82
SNX29P1-201ENST00000548357 KLRG1Q96E93 195 aa20.17■□□□□ 0.82
SNX29P1-201ENST00000548357 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
SNX29P1-201ENST00000548357 NUTM1Q86Y26 1132 aa20.16■□□□□ 0.82
SNX29P1-201ENST00000548357 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
SNX29P1-201ENST00000548357 UBN2Q6ZU65 1347 aa20.16■□□□□ 0.82
SNX29P1-201ENST00000548357 ADAMTSL1Q8N6G6 1762 aa20.16■□□□□ 0.82
SNX29P1-201ENST00000548357 MYL6BP14649 208 aa20.15■□□□□ 0.82
SNX29P1-201ENST00000548357 NPR1P16066 1061 aa20.15■□□□□ 0.82
SNX29P1-201ENST00000548357 MAP3K15Q6ZN16 1313 aa20.14■□□□□ 0.81
SNX29P1-201ENST00000548357 LTBP1Q14766 1721 aa20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 RGL2O15211 777 aa20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 GPTP24298 496 aa20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 TPTE2Q6XPS3 522 aa20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 JMYQ8N9B5 988 aa20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 ZBTB3Q9H5J0 574 aa20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 ZNF277Q9NRM2 450 aaPredicted RBP20.13■□□□□ 0.81
SNX29P1-201ENST00000548357 MAPK8IP3Q9UPT6 1336 aa20.12■□□□□ 0.81
SNX29P1-201ENST00000548357 PROSER3Q2NL68 480 aa20.12■□□□□ 0.81
SNX29P1-201ENST00000548357 CCDC93Q567U6 631 aa20.12■□□□□ 0.81
SNX29P1-201ENST00000548357 C3orf67Q6ZVT6 689 aa20.12■□□□□ 0.81
SNX29P1-201ENST00000548357 ANXA1P04083 346 aa20.11■□□□□ 0.81
SNX29P1-201ENST00000548357 NEFMP07197 916 aa20.1■□□□□ 0.81
SNX29P1-201ENST00000548357 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNX29P1-201ENST00000548357 PDIA6Q15084 440 aa20.1■□□□□ 0.81
SNX29P1-201ENST00000548357 SUSD4Q5VX71 490 aa20.1■□□□□ 0.81
SNX29P1-201ENST00000548357 DPY19L2Q6NUT2 758 aa20.1■□□□□ 0.81
SNX29P1-201ENST00000548357 ERVV-1B6SEH8 477 aa20.09■□□□□ 0.81
SNX29P1-201ENST00000548357 CRY2Q49AN0 593 aa20.09■□□□□ 0.81
SNX29P1-201ENST00000548357 SOGA3Q5TF21 947 aa20.09■□□□□ 0.81
SNX29P1-201ENST00000548357 CCDC146Q8IYE0 955 aa20.09■□□□□ 0.81
SNX29P1-201ENST00000548357 TSPYL4Q9UJ04 414 aa20.09■□□□□ 0.81
SNX29P1-201ENST00000548357 DDX60Q8IY21 1712 aaKnown RBP20.09■□□□□ 0.81
SNX29P1-201ENST00000548357 RIC1Q4ADV7 1423 aa20.09■□□□□ 0.81
SNX29P1-201ENST00000548357 NTSR2O95665 410 aa20.08■□□□□ 0.81
SNX29P1-201ENST00000548357 RIPK4P57078 832 aa20.08■□□□□ 0.81
SNX29P1-201ENST00000548357 KRT24Q2M2I5 525 aa20.08■□□□□ 0.81
SNX29P1-201ENST00000548357 KIF6Q6ZMV9 814 aa20.08■□□□□ 0.81
SNX29P1-201ENST00000548357 ZNF34Q8IZ26 560 aa20.08■□□□□ 0.81
SNX29P1-201ENST00000548357 TMPOP42166 694 aaKnown RBP20.07■□□□□ 0.8
SNX29P1-201ENST00000548357 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
SNX29P1-201ENST00000548357 IBTKQ9P2D0 1353 aaPredicted RBP20.07■□□□□ 0.8
SNX29P1-201ENST00000548357 EIF2S2P20042 333 aaKnown RBP20.06■□□□□ 0.8
SNX29P1-201ENST00000548357 GTF2E1P29083 439 aaPredicted RBP20.06■□□□□ 0.8
SNX29P1-201ENST00000548357 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
SNX29P1-201ENST00000548357 COL4A1P02462 1669 aa20.06■□□□□ 0.8
SNX29P1-201ENST00000548357 RALBP1Q15311 655 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms