RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
BEST3-208ENST00000547208 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
BEST3-208ENST00000547208 DICER1Q9UPY3 1922 aaKnown RBP13.62□□□□□ -0.23
BEST3-208ENST00000547208 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
BEST3-208ENST00000547208 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
BEST3-208ENST00000547208 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
BEST3-208ENST00000547208 COL13A1Q5TAT6 717 aaPredicted RBP13.62□□□□□ -0.23
BEST3-208ENST00000547208 PNISRQ8TF01 805 aaKnown RBP13.62□□□□□ -0.23
BEST3-208ENST00000547208 ANKRD36CQ5JPF3 1778 aa13.61□□□□□ -0.23
BEST3-208ENST00000547208 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
BEST3-208ENST00000547208 RIPK4P57078 832 aa13.61□□□□□ -0.23
BEST3-208ENST00000547208 DALRD3Q5D0E6 543 aaKnown RBP13.61□□□□□ -0.23
BEST3-208ENST00000547208 PRR5LQ6MZQ0 368 aa13.61□□□□□ -0.23
BEST3-208ENST00000547208 ARHGAP27Q6ZUM4 889 aa13.61□□□□□ -0.23
BEST3-208ENST00000547208 TNRC6CQ9HCJ0 1690 aaKnown RBP13.6□□□□□ -0.23
BEST3-208ENST00000547208 CAPN15O75808 1086 aa13.6□□□□□ -0.23
BEST3-208ENST00000547208 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
BEST3-208ENST00000547208 PCNTO95613 3336 aa13.59□□□□□ -0.23
BEST3-208ENST00000547208 RGL2O15211 777 aa13.59□□□□□ -0.23
BEST3-208ENST00000547208 CLEC4GQ6UXB4 293 aa13.59□□□□□ -0.23
BEST3-208ENST00000547208 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
BEST3-208ENST00000547208 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
BEST3-208ENST00000547208 BRIP1Q9BX63 1249 aa13.59□□□□□ -0.23
BEST3-208ENST00000547208 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
BEST3-208ENST00000547208 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
BEST3-208ENST00000547208 C2CD5Q86YS7 1000 aa13.58□□□□□ -0.24
BEST3-208ENST00000547208 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
BEST3-208ENST00000547208 TRIM35Q9UPQ4 493 aa13.58□□□□□ -0.24
BEST3-208ENST00000547208 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
BEST3-208ENST00000547208 H0YIN7 160 aa13.57□□□□□ -0.24
BEST3-208ENST00000547208 HLFQ16534 295 aa13.57□□□□□ -0.24
BEST3-208ENST00000547208 CNBD1Q8NA66 436 aa13.57□□□□□ -0.24
BEST3-208ENST00000547208 WDR90Q96KV7 1748 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 PDE6BP35913 854 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 PRELPP51888 382 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 WDR43Q15061 677 aaKnown RBP eCLIP13.56□□□□□ -0.24
BEST3-208ENST00000547208 C9orf131Q5VYM1 1079 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 LRP10Q7Z4F1 713 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 TTLL6Q8N841 843 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 BABAM1Q9NWV8 329 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 TSPYL4Q9UJ04 414 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 ZNF652Q9Y2D9 606 aa13.56□□□□□ -0.24
BEST3-208ENST00000547208 LAMB2P55268 1798 aa13.55□□□□□ -0.24
BEST3-208ENST00000547208 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
BEST3-208ENST00000547208 SRGNP10124 158 aa13.54□□□□□ -0.24
BEST3-208ENST00000547208 ZEB1P37275 1124 aaPredicted RBP13.54□□□□□ -0.24
BEST3-208ENST00000547208 RASSF7Q02833 373 aa13.54□□□□□ -0.24
BEST3-208ENST00000547208 PDIA6Q15084 440 aa13.54□□□□□ -0.24
BEST3-208ENST00000547208 NEUROD2Q15784 382 aa13.54□□□□□ -0.24
BEST3-208ENST00000547208 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
BEST3-208ENST00000547208 PDZRN3Q9UPQ7 1066 aa13.54□□□□□ -0.24
BEST3-208ENST00000547208 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
BEST3-208ENST00000547208 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
BEST3-208ENST00000547208 KLRG2A4D1S0 409 aaPredicted RBP13.53□□□□□ -0.24
BEST3-208ENST00000547208 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
BEST3-208ENST00000547208 CHL1O00533 1208 aa13.53□□□□□ -0.24
BEST3-208ENST00000547208 MYL6BP14649 208 aa13.53□□□□□ -0.24
BEST3-208ENST00000547208 APLP1P51693 650 aa13.53□□□□□ -0.24
BEST3-208ENST00000547208 ST5P78524 1137 aa13.53□□□□□ -0.24
BEST3-208ENST00000547208 C1QBPQ07021 282 aaKnown RBP13.53□□□□□ -0.24
BEST3-208ENST00000547208 NBPF5PQ86XG9 351 aaPredicted RBP13.53□□□□□ -0.24
BEST3-208ENST00000547208 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
BEST3-208ENST00000547208 NFKBIEO00221 500 aa13.52□□□□□ -0.25
BEST3-208ENST00000547208 TOMM70O94826 608 aa13.52□□□□□ -0.25
BEST3-208ENST00000547208 PROSER3Q2NL68 480 aa13.52□□□□□ -0.25
BEST3-208ENST00000547208 CCDC184Q52MB2 194 aa13.52□□□□□ -0.25
BEST3-208ENST00000547208 STYK1Q6J9G0 422 aa13.52□□□□□ -0.25
BEST3-208ENST00000547208 ZNF622Q969S3 477 aaKnown RBP eCLIP13.52□□□□□ -0.25
BEST3-208ENST00000547208 RNF181Q9P0P0 153 aa13.52□□□□□ -0.25
BEST3-208ENST00000547208 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
BEST3-208ENST00000547208 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
BEST3-208ENST00000547208 IBTKQ9P2D0 1353 aaPredicted RBP13.51□□□□□ -0.25
BEST3-208ENST00000547208 UBN2Q6ZU65 1347 aa13.51□□□□□ -0.25
BEST3-208ENST00000547208 KRT24Q2M2I5 525 aa13.51□□□□□ -0.25
BEST3-208ENST00000547208 NPHP1O15259 732 aa13.5□□□□□ -0.25
BEST3-208ENST00000547208 C21orf2O43822 256 aa13.5□□□□□ -0.25
BEST3-208ENST00000547208 LMNB1P20700 586 aa13.5□□□□□ -0.25
BEST3-208ENST00000547208 PRPF40BQ6NWY9 871 aaKnown RBP13.5□□□□□ -0.25
BEST3-208ENST00000547208 TPTE2Q6XPS3 522 aa13.5□□□□□ -0.25
BEST3-208ENST00000547208 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
BEST3-208ENST00000547208 MASTLQ96GX5 879 aa13.5□□□□□ -0.25
BEST3-208ENST00000547208 ZBTB3Q9H5J0 574 aa13.5□□□□□ -0.25
BEST3-208ENST00000547208 ZC3H4Q9UPT8 1303 aaKnown RBP13.49□□□□□ -0.25
BEST3-208ENST00000547208 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
BEST3-208ENST00000547208 ANXA1P04083 346 aa13.49□□□□□ -0.25
BEST3-208ENST00000547208 EIF2S2P20042 333 aaKnown RBP13.49□□□□□ -0.25
BEST3-208ENST00000547208 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
BEST3-208ENST00000547208 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
BEST3-208ENST00000547208 ZNF34Q8IZ26 560 aa13.49□□□□□ -0.25
BEST3-208ENST00000547208 C7orf43Q8WVR3 580 aa13.49□□□□□ -0.25
BEST3-208ENST00000547208 CNKSR1Q969H4 720 aa13.49□□□□□ -0.25
BEST3-208ENST00000547208 RRAGCQ9HB90 399 aa13.49□□□□□ -0.25
BEST3-208ENST00000547208 DDX60Q8IY21 1712 aaKnown RBP13.49□□□□□ -0.25
BEST3-208ENST00000547208 LTBP3Q9NS15 1303 aa13.48□□□□□ -0.25
BEST3-208ENST00000547208 APAF1O14727 1248 aa13.48□□□□□ -0.25
BEST3-208ENST00000547208 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
BEST3-208ENST00000547208 KLRG1Q96E93 195 aa13.48□□□□□ -0.25
BEST3-208ENST00000547208 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
BEST3-208ENST00000547208 TAF1P21675 1872 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms