RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 PDZRN3Q9UPQ7 1066 aa19.26■□□□□ 0.67
CCDC38-205ENST00000546947 MAP3K15Q6ZN16 1313 aa19.25■□□□□ 0.67
CCDC38-205ENST00000546947 CHRNA5P30532 468 aa19.25■□□□□ 0.67
CCDC38-205ENST00000546947 DALRD3Q5D0E6 543 aaKnown RBP19.25■□□□□ 0.67
CCDC38-205ENST00000546947 PRR5LQ6MZQ0 368 aa19.25■□□□□ 0.67
CCDC38-205ENST00000546947 KIF6Q6ZMV9 814 aa19.25■□□□□ 0.67
CCDC38-205ENST00000546947 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
CCDC38-205ENST00000546947 NPHP1O15259 732 aa19.24■□□□□ 0.67
CCDC38-205ENST00000546947 HOXB7P09629 217 aa19.24■□□□□ 0.67
CCDC38-205ENST00000546947 ZNF853P0CG23 659 aa19.24■□□□□ 0.67
CCDC38-205ENST00000546947 GNAI1P63096 354 aa19.24■□□□□ 0.67
CCDC38-205ENST00000546947 HLFQ16534 295 aa19.24■□□□□ 0.67
CCDC38-205ENST00000546947 CNBD1Q8NA66 436 aa19.24■□□□□ 0.67
CCDC38-205ENST00000546947 BRIP1Q9BX63 1249 aa19.24■□□□□ 0.67
CCDC38-205ENST00000546947 PDE6BP35913 854 aa19.23■□□□□ 0.67
CCDC38-205ENST00000546947 ST5P78524 1137 aa19.23■□□□□ 0.67
CCDC38-205ENST00000546947 PDIA6Q15084 440 aa19.23■□□□□ 0.67
CCDC38-205ENST00000546947 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
CCDC38-205ENST00000546947 TTLL7Q6ZT98 887 aa19.23■□□□□ 0.67
CCDC38-205ENST00000546947 ZNF784Q8NCA9 323 aaPredicted RBP19.23■□□□□ 0.67
CCDC38-205ENST00000546947 MBIPQ9NS73 344 aa19.23■□□□□ 0.67
CCDC38-205ENST00000546947 NIP7Q9Y221 180 aaKnown RBP eCLIP19.23■□□□□ 0.67
CCDC38-205ENST00000546947 H0YIN7 160 aa19.22■□□□□ 0.67
CCDC38-205ENST00000546947 CCDC27Q2M243 656 aa19.22■□□□□ 0.67
CCDC38-205ENST00000546947 KRT24Q2M2I5 525 aa19.22■□□□□ 0.67
CCDC38-205ENST00000546947 LRP10Q7Z4F1 713 aa19.22■□□□□ 0.67
CCDC38-205ENST00000546947 NBPF5PQ86XG9 351 aaPredicted RBP19.22■□□□□ 0.67
CCDC38-205ENST00000546947 C2CD5Q86YS7 1000 aa19.22■□□□□ 0.67
CCDC38-205ENST00000546947 COL11A2P13942 1736 aaPredicted RBP19.22■□□□□ 0.67
CCDC38-205ENST00000546947 TPTE2Q6XPS3 522 aa19.21■□□□□ 0.67
CCDC38-205ENST00000546947 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
CCDC38-205ENST00000546947 ZBTB3Q9H5J0 574 aa19.2■□□□□ 0.66
CCDC38-205ENST00000546947 DDX21Q9NR30 783 aaKnown RBP eCLIP19.2■□□□□ 0.66
CCDC38-205ENST00000546947 PROSER3Q2NL68 480 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 HDGFL1Q5TGJ6 251 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 DUSP27Q5VZP5 1158 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 GIGYF2Q6Y7W6 1299 aaKnown RBP19.19■□□□□ 0.66
CCDC38-205ENST00000546947 ARHGAP27Q6ZUM4 889 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 CCDC24Q8N4L8 307 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 TTLL6Q8N841 843 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 NECTIN2Q92692 538 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 ANKRD36CQ5JPF3 1778 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 ARFGEF2Q9Y6D5 1785 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 ADCY9O60503 1353 aa19.19■□□□□ 0.66
CCDC38-205ENST00000546947 ANXA1P04083 346 aa19.18■□□□□ 0.66
CCDC38-205ENST00000546947 NYXQ9GZU5 481 aa19.18■□□□□ 0.66
CCDC38-205ENST00000546947 CACNA1SQ13698 1873 aa19.18■□□□□ 0.66
CCDC38-205ENST00000546947 WWC1Q8IX03 1113 aa19.17■□□□□ 0.66
CCDC38-205ENST00000546947 IBTKQ9P2D0 1353 aaPredicted RBP19.17■□□□□ 0.66
CCDC38-205ENST00000546947 COPS6Q7L5N1 327 aa19.16■□□□□ 0.66
CCDC38-205ENST00000546947 ZNF622Q969S3 477 aaKnown RBP eCLIP19.16■□□□□ 0.66
CCDC38-205ENST00000546947 CHPF2Q9P2E5 772 aa19.16■□□□□ 0.66
CCDC38-205ENST00000546947 DBF4Q9UBU7 674 aaPredicted RBP19.16■□□□□ 0.66
CCDC38-205ENST00000546947 SBF1O95248 1867 aa19.16■□□□□ 0.66
CCDC38-205ENST00000546947 FAM177BA6PVY3 158 aa19.15■□□□□ 0.66
CCDC38-205ENST00000546947 GTF2E1P29083 439 aaPredicted RBP19.15■□□□□ 0.66
CCDC38-205ENST00000546947 STYK1Q6J9G0 422 aa19.15■□□□□ 0.66
CCDC38-205ENST00000546947 ZNF34Q8IZ26 560 aa19.15■□□□□ 0.66
CCDC38-205ENST00000546947 XAGE3Q8WTP9 111 aa19.15■□□□□ 0.66
CCDC38-205ENST00000546947 IL16Q14005 1332 aa19.15■□□□□ 0.66
CCDC38-205ENST00000546947 UBN2Q6ZU65 1347 aa19.15■□□□□ 0.66
CCDC38-205ENST00000546947 SRGNP10124 158 aa19.14■□□□□ 0.65
CCDC38-205ENST00000546947 AIMP1Q12904 312 aaKnown RBP19.14■□□□□ 0.65
CCDC38-205ENST00000546947 PARP10Q53GL7 1025 aa19.14■□□□□ 0.65
CCDC38-205ENST00000546947 HSP90AB3PQ58FF7 597 aa19.14■□□□□ 0.65
CCDC38-205ENST00000546947 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
CCDC38-205ENST00000546947 MASTLQ96GX5 879 aa19.14■□□□□ 0.65
CCDC38-205ENST00000546947 CHMP4AQ9BY43 222 aa19.14■□□□□ 0.65
CCDC38-205ENST00000546947 KLRG2A4D1S0 409 aaPredicted RBP19.13■□□□□ 0.65
CCDC38-205ENST00000546947 GPTP24298 496 aa19.13■□□□□ 0.65
CCDC38-205ENST00000546947 PPP1R42Q7Z4L9 355 aa19.13■□□□□ 0.65
CCDC38-205ENST00000546947 CNKSR1Q969H4 720 aa19.13■□□□□ 0.65
CCDC38-205ENST00000546947 HYPKQ9NX55 129 aa19.13■□□□□ 0.65
CCDC38-205ENST00000546947 SLX4Q8IY92 1834 aa19.13■□□□□ 0.65
CCDC38-205ENST00000546947 RIC1Q4ADV7 1423 aa19.12■□□□□ 0.65
CCDC38-205ENST00000546947 SENP3-EIF4A1A0A087X0R7 540 aa19.12■□□□□ 0.65
CCDC38-205ENST00000546947 SUSD4Q5VX71 490 aa19.12■□□□□ 0.65
CCDC38-205ENST00000546947 TNRC6CQ9HCJ0 1690 aaKnown RBP19.11■□□□□ 0.65
CCDC38-205ENST00000546947 NPR1P16066 1061 aa19.11■□□□□ 0.65
CCDC38-205ENST00000546947 WDR63Q8IWG1 891 aa19.11■□□□□ 0.65
CCDC38-205ENST00000546947 C8orf58Q8NAV2 365 aa19.11■□□□□ 0.65
CCDC38-205ENST00000546947 FER1L6Q2WGJ9 1857 aa19.11■□□□□ 0.65
CCDC38-205ENST00000546947 CCDC88AQ3V6T2 1871 aa19.11■□□□□ 0.65
CCDC38-205ENST00000546947 ABCC12Q96J65 1359 aa19.1■□□□□ 0.65
CCDC38-205ENST00000546947 ELL2O00472 640 aaPredicted RBP19.1■□□□□ 0.65
CCDC38-205ENST00000546947 NTSR2O95665 410 aa19.1■□□□□ 0.65
CCDC38-205ENST00000546947 TCIRG1Q13488 830 aa19.1■□□□□ 0.65
CCDC38-205ENST00000546947 NUTM1Q86Y26 1132 aa19.1■□□□□ 0.65
CCDC38-205ENST00000546947 PLBD2Q8NHP8 589 aa19.1■□□□□ 0.65
CCDC38-205ENST00000546947 RNF123Q5XPI4 1314 aa19.09■□□□□ 0.65
CCDC38-205ENST00000546947 ERFEQ4G0M1 354 aa19.09■□□□□ 0.65
CCDC38-205ENST00000546947 CCDC30Q5VVM6 783 aa19.09■□□□□ 0.65
CCDC38-205ENST00000546947 C9orf131Q5VYM1 1079 aa19.09■□□□□ 0.65
CCDC38-205ENST00000546947 ANKRD13DQ6ZTN6 518 aa19.09■□□□□ 0.65
CCDC38-205ENST00000546947 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
CCDC38-205ENST00000546947 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
CCDC38-205ENST00000546947 C21orf2O43822 256 aa19.08■□□□□ 0.64
CCDC38-205ENST00000546947 PRPF40BQ6NWY9 871 aaKnown RBP19.08■□□□□ 0.64
CCDC38-205ENST00000546947 UTP14AQ9BVJ6 771 aaKnown RBP19.08■□□□□ 0.64
CCDC38-205ENST00000546947 RASSF7Q02833 373 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms