RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 TTLL6Q8N841 843 aa34.66■■■■□ 3.14
SRSF9-202ENST00000546942 ZNF622Q969S3 477 aaKnown RBP eCLIP34.66■■■■□ 3.14
SRSF9-202ENST00000546942 ST5P78524 1137 aa34.65■■■■□ 3.14
SRSF9-202ENST00000546942 NBPF5PQ86XG9 351 aaPredicted RBP34.65■■■■□ 3.14
SRSF9-202ENST00000546942 HLFQ16534 295 aa34.64■■■■□ 3.14
SRSF9-202ENST00000546942 C9orf131Q5VYM1 1079 aa34.64■■■■□ 3.14
SRSF9-202ENST00000546942 NIP7Q9Y221 180 aaKnown RBP eCLIP34.64■■■■□ 3.14
SRSF9-202ENST00000546942 LAS1LQ9Y4W2 734 aaKnown RBP34.64■■■■□ 3.14
SRSF9-202ENST00000546942 FAM177BA6PVY3 158 aa34.63■■■■□ 3.13
SRSF9-202ENST00000546942 EIF2S2P20042 333 aaKnown RBP34.62■■■■□ 3.13
SRSF9-202ENST00000546942 TRIM35Q9UPQ4 493 aa34.62■■■■□ 3.13
SRSF9-202ENST00000546942 TTLL7Q6ZT98 887 aa34.6■■■■□ 3.13
SRSF9-202ENST00000546942 BABAM1Q9NWV8 329 aa34.6■■■■□ 3.13
SRSF9-202ENST00000546942 ZNF219Q9P2Y4 722 aaPredicted RBP34.6■■■■□ 3.13
SRSF9-202ENST00000546942 COL11A2P13942 1736 aaPredicted RBP34.6■■■■□ 3.13
SRSF9-202ENST00000546942 KIF6Q6ZMV9 814 aa34.59■■■■□ 3.13
SRSF9-202ENST00000546942 RNF181Q9P0P0 153 aa34.59■■■■□ 3.13
SRSF9-202ENST00000546942 PDZRN3Q9UPQ7 1066 aa34.59■■■■□ 3.13
SRSF9-202ENST00000546942 RASSF7Q02833 373 aa34.58■■■■□ 3.13
SRSF9-202ENST00000546942 SBF1O95248 1867 aa34.58■■■■□ 3.13
SRSF9-202ENST00000546942 NUP98P52948 1817 aa34.58■■■■□ 3.13
SRSF9-202ENST00000546942 TPTE2Q6XPS3 522 aa34.56■■■■□ 3.12
SRSF9-202ENST00000546942 NECTIN2Q92692 538 aa34.56■■■■□ 3.12
SRSF9-202ENST00000546942 ZBTB3Q9H5J0 574 aa34.56■■■■□ 3.12
SRSF9-202ENST00000546942 CACNA1SQ13698 1873 aa34.56■■■■□ 3.12
SRSF9-202ENST00000546942 MAP3K15Q6ZN16 1313 aa34.55■■■■□ 3.12
SRSF9-202ENST00000546942 SENP3-EIF4A1A0A087X0R7 540 aa34.54■■■■□ 3.12
SRSF9-202ENST00000546942 ZNF316A6NFI3 1004 aaPredicted RBP34.54■■■■□ 3.12
SRSF9-202ENST00000546942 ERVV-1B6SEH8 477 aa34.54■■■■□ 3.12
SRSF9-202ENST00000546942 RGL2O15211 777 aa34.54■■■■□ 3.12
SRSF9-202ENST00000546942 CHL1O00533 1208 aa34.53■■■■□ 3.12
SRSF9-202ENST00000546942 GTF2E1P29083 439 aaPredicted RBP34.53■■■■□ 3.12
SRSF9-202ENST00000546942 APAF1O14727 1248 aa34.52■■■■□ 3.12
SRSF9-202ENST00000546942 C21orf2O43822 256 aa34.52■■■■□ 3.12
SRSF9-202ENST00000546942 ANXA1P04083 346 aa34.52■■■■□ 3.12
SRSF9-202ENST00000546942 KRT24Q2M2I5 525 aa34.52■■■■□ 3.12
SRSF9-202ENST00000546942 ERBB4Q15303 1308 aa34.52■■■■□ 3.12
SRSF9-202ENST00000546942 SRGNP10124 158 aa34.51■■■■□ 3.12
SRSF9-202ENST00000546942 CCDC88AQ3V6T2 1871 aa34.5■■■■□ 3.11
SRSF9-202ENST00000546942 GPTP24298 496 aa34.5■■■■□ 3.11
SRSF9-202ENST00000546942 CCDC184Q52MB2 194 aa34.5■■■■□ 3.11
SRSF9-202ENST00000546942 MASTLQ96GX5 879 aa34.5■■■■□ 3.11
SRSF9-202ENST00000546942 PDIA6Q15084 440 aa34.49■■■■□ 3.11
SRSF9-202ENST00000546942 PROSER3Q2NL68 480 aa34.49■■■■□ 3.11
SRSF9-202ENST00000546942 STYK1Q6J9G0 422 aa34.49■■■■□ 3.11
SRSF9-202ENST00000546942 CNKSR1Q969H4 720 aa34.49■■■■□ 3.11
SRSF9-202ENST00000546942 SLX4Q8IY92 1834 aa34.48■■■■□ 3.11
SRSF9-202ENST00000546942 KIF3CO14782 793 aa34.46■■■■□ 3.11
SRSF9-202ENST00000546942 LMNB1P20700 586 aa34.46■■■■□ 3.11
SRSF9-202ENST00000546942 PRPF40BQ6NWY9 871 aaKnown RBP34.46■■■■□ 3.11
SRSF9-202ENST00000546942 NUTM1Q86Y26 1132 aa34.46■■■■□ 3.11
SRSF9-202ENST00000546942 NFKBIEO00221 500 aa34.45■■■■□ 3.11
SRSF9-202ENST00000546942 PRELPP51888 382 aa34.45■■■■□ 3.11
SRSF9-202ENST00000546942 NYXQ9GZU5 481 aa34.45■■■■□ 3.11
SRSF9-202ENST00000546942 NMRK2Q9NPI5 230 aa34.45■■■■□ 3.11
SRSF9-202ENST00000546942 AIMP1Q12904 312 aaKnown RBP34.44■■■■□ 3.1
SRSF9-202ENST00000546942 LRP10Q7Z4F1 713 aa34.44■■■■□ 3.1
SRSF9-202ENST00000546942 NPR1P16066 1061 aa34.43■■■■□ 3.1
SRSF9-202ENST00000546942 GIGYF2Q6Y7W6 1299 aaKnown RBP34.43■■■■□ 3.1
SRSF9-202ENST00000546942 CFAP44Q96MT7 982 aa34.43■■■■□ 3.1
SRSF9-202ENST00000546942 UBN2Q6ZU65 1347 aa34.42■■■■□ 3.1
SRSF9-202ENST00000546942 ERFEQ4G0M1 354 aa34.42■■■■□ 3.1
SRSF9-202ENST00000546942 COPS6Q7L5N1 327 aa34.41■■■■□ 3.1
SRSF9-202ENST00000546942 ARFGEF2Q9Y6D5 1785 aa34.41■■■■□ 3.1
SRSF9-202ENST00000546942 FER1L6Q2WGJ9 1857 aa34.4■■■■□ 3.1
SRSF9-202ENST00000546942 KLRG2A4D1S0 409 aaPredicted RBP34.4■■■■□ 3.1
SRSF9-202ENST00000546942 SUSD4Q5VX71 490 aa34.4■■■■□ 3.1
SRSF9-202ENST00000546942 ZNF34Q8IZ26 560 aa34.4■■■■□ 3.1
SRSF9-202ENST00000546942 XAGE3Q8WTP9 111 aa34.4■■■■□ 3.1
SRSF9-202ENST00000546942 MBIPQ9NS73 344 aa34.4■■■■□ 3.1
SRSF9-202ENST00000546942 KDM2BQ8NHM5 1336 aa34.39■■■■□ 3.1
SRSF9-202ENST00000546942 ANP32CO43423 234 aa34.39■■■■□ 3.1
SRSF9-202ENST00000546942 ABCC12Q96J65 1359 aa34.38■■■■□ 3.09
SRSF9-202ENST00000546942 TNRC6CQ9HCJ0 1690 aaKnown RBP34.38■■■■□ 3.09
SRSF9-202ENST00000546942 HDGFL1Q5TGJ6 251 aa34.38■■■■□ 3.09
SRSF9-202ENST00000546942 DDX21Q9NR30 783 aaKnown RBP eCLIP34.38■■■■□ 3.09
SRSF9-202ENST00000546942 CHPF2Q9P2E5 772 aa34.38■■■■□ 3.09
SRSF9-202ENST00000546942 TIAM2Q8IVF5 1701 aa34.36■■■■□ 3.09
SRSF9-202ENST00000546942 DUSP27Q5VZP5 1158 aa34.36■■■■□ 3.09
SRSF9-202ENST00000546942 CALD1Q05682 793 aaKnown RBP34.35■■■■□ 3.09
SRSF9-202ENST00000546942 TAOK3Q9H2K8 898 aa34.35■■■■□ 3.09
SRSF9-202ENST00000546942 RRAGCQ9HB90 399 aa34.35■■■■□ 3.09
SRSF9-202ENST00000546942 SOGA3Q5TF21 947 aa34.34■■■■□ 3.09
SRSF9-202ENST00000546942 PPP1R42Q7Z4L9 355 aa34.34■■■■□ 3.09
SRSF9-202ENST00000546942 MRS2Q9HD23 443 aa34.34■■■■□ 3.09
SRSF9-202ENST00000546942 IFT57Q9NWB7 429 aa34.34■■■■□ 3.09
SRSF9-202ENST00000546942 ZNF853P0CG23 659 aa34.33■■■■□ 3.09
SRSF9-202ENST00000546942 GNAI1P63096 354 aa34.33■■■■□ 3.09
SRSF9-202ENST00000546942 NTSR2O95665 410 aa34.32■■■■□ 3.08
SRSF9-202ENST00000546942 HOXB7P09629 217 aa34.32■■■■□ 3.08
SRSF9-202ENST00000546942 ALDH1B1P30837 517 aa34.32■■■■□ 3.08
SRSF9-202ENST00000546942 PARP10Q53GL7 1025 aa34.32■■■■□ 3.08
SRSF9-202ENST00000546942 OLFM4Q6UX06 510 aa34.32■■■■□ 3.08
SRSF9-202ENST00000546942 C16orf71Q8IYS4 520 aaPredicted RBP34.32■■■■□ 3.08
SRSF9-202ENST00000546942 ZC3H4Q9UPT8 1303 aaKnown RBP34.31■■■■□ 3.08
SRSF9-202ENST00000546942 ELL2O00472 640 aaPredicted RBP34.31■■■■□ 3.08
SRSF9-202ENST00000546942 TOMM70O94826 608 aa34.31■■■■□ 3.08
SRSF9-202ENST00000546942 C7orf43Q8WVR3 580 aa34.31■■■■□ 3.08
SRSF9-202ENST00000546942 RPGRQ92834 1020 aaKnown RBP34.31■■■■□ 3.08
SRSF9-202ENST00000546942 IBTKQ9P2D0 1353 aaPredicted RBP34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms