RNA–Protein interactions for RNA: ENST00000545869.5

PDCD2-214, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-214ENST00000545869 COL13A1Q5TAT6 717 aaPredicted RBP31.53■■■□□ 2.64
PDCD2-214ENST00000545869 ARFGEF2Q9Y6D5 1785 aa31.53■■■□□ 2.64
PDCD2-214ENST00000545869 PDE6BP35913 854 aa31.52■■■□□ 2.64
PDCD2-214ENST00000545869 USP16Q9Y5T5 823 aa31.5■■■□□ 2.63
PDCD2-214ENST00000545869 BTBD11A6QL63 1104 aa31.49■■■□□ 2.63
PDCD2-214ENST00000545869 CNBD1Q8NA66 436 aa31.49■■■□□ 2.63
PDCD2-214ENST00000545869 MIER1Q8N108 512 aa31.48■■■□□ 2.63
PDCD2-214ENST00000545869 DZIP3Q86Y13 1208 aaKnown RBP31.47■■■□□ 2.63
PDCD2-214ENST00000545869 SETDB2Q96T68 719 aa31.47■■■□□ 2.63
PDCD2-214ENST00000545869 PDZRN3Q9UPQ7 1066 aa31.47■■■□□ 2.63
PDCD2-214ENST00000545869 ERFEQ4G0M1 354 aa31.46■■■□□ 2.63
PDCD2-214ENST00000545869 LTBP3Q9NS15 1303 aa31.46■■■□□ 2.63
PDCD2-214ENST00000545869 CCER2I3L3R5 266 aa31.45■■■□□ 2.63
PDCD2-214ENST00000545869 SRGNP10124 158 aa31.45■■■□□ 2.63
PDCD2-214ENST00000545869 PRPF40BQ6NWY9 871 aaKnown RBP31.45■■■□□ 2.63
PDCD2-214ENST00000545869 MCM10Q7L590 875 aa31.44■■■□□ 2.62
PDCD2-214ENST00000545869 STYK1Q6J9G0 422 aa31.43■■■□□ 2.62
PDCD2-214ENST00000545869 TAOK3Q9H2K8 898 aa31.43■■■□□ 2.62
PDCD2-214ENST00000545869 NUDCQ9Y266 331 aa31.43■■■□□ 2.62
PDCD2-214ENST00000545869 POTEIP0CG38 1075 aa31.42■■■□□ 2.62
PDCD2-214ENST00000545869 POTEJP0CG39 1038 aa31.42■■■□□ 2.62
PDCD2-214ENST00000545869 CCDC184Q52MB2 194 aa31.42■■■□□ 2.62
PDCD2-214ENST00000545869 MRS2Q9HD23 443 aa31.42■■■□□ 2.62
PDCD2-214ENST00000545869 ST5P78524 1137 aa31.41■■■□□ 2.62
PDCD2-214ENST00000545869 CNKSR1Q969H4 720 aa31.41■■■□□ 2.62
PDCD2-214ENST00000545869 NBPF26B4DH59 902 aa31.4■■■□□ 2.62
PDCD2-214ENST00000545869 DCTN1Q14203 1278 aa31.4■■■□□ 2.62
PDCD2-214ENST00000545869 DPY19L2Q6NUT2 758 aa31.4■■■□□ 2.62
PDCD2-214ENST00000545869 NBPF10Q6P3W6 841 aaKnown RBP31.4■■■□□ 2.62
PDCD2-214ENST00000545869 NBPF15Q8N660 670 aa31.4■■■□□ 2.62
PDCD2-214ENST00000545869 DDNO94850 711 aaPredicted RBP31.39■■■□□ 2.62
PDCD2-214ENST00000545869 C7orf43Q8WVR3 580 aa31.39■■■□□ 2.62
PDCD2-214ENST00000545869 MASTLQ96GX5 879 aa31.39■■■□□ 2.62
PDCD2-214ENST00000545869 NPHP1O15259 732 aa31.38■■■□□ 2.61
PDCD2-214ENST00000545869 NPM2Q86SE8 214 aaKnown RBP31.37■■■□□ 2.61
PDCD2-214ENST00000545869 SNRPA1P09661 255 aaKnown RBP31.36■■■□□ 2.61
PDCD2-214ENST00000545869 HSPA1AP0DMV8 641 aaKnown RBP31.36■■■□□ 2.61
PDCD2-214ENST00000545869 HSPA1BP0DMV9 641 aaKnown RBP31.36■■■□□ 2.61
PDCD2-214ENST00000545869 U2AF1L5P0DN76 240 aaPredicted RBP31.36■■■□□ 2.61
PDCD2-214ENST00000545869 U2AF1Q01081 240 aaKnown RBP eCLIP31.36■■■□□ 2.61
PDCD2-214ENST00000545869 NBPF5PQ86XG9 351 aaPredicted RBP31.36■■■□□ 2.61
PDCD2-214ENST00000545869 OLFM4Q6UX06 510 aa31.35■■■□□ 2.61
PDCD2-214ENST00000545869 CLEC4GQ6UXB4 293 aa31.34■■■□□ 2.61
PDCD2-214ENST00000545869 LAMB4A4D0S4 1761 aa31.34■■■□□ 2.61
PDCD2-214ENST00000545869 KLRG2A4D1S0 409 aaPredicted RBP31.32■■■□□ 2.6
PDCD2-214ENST00000545869 WDR43Q15061 677 aaKnown RBP eCLIP31.32■■■□□ 2.6
PDCD2-214ENST00000545869 CHADLQ6NUI6 762 aa31.32■■■□□ 2.6
PDCD2-214ENST00000545869 RTF1Q92541 710 aaKnown RBP31.31■■■□□ 2.6
PDCD2-214ENST00000545869 DLG5Q8TDM6 1919 aa31.3■■■□□ 2.6
PDCD2-214ENST00000545869 HLFQ16534 295 aa31.3■■■□□ 2.6
PDCD2-214ENST00000545869 SOGA3Q5TF21 947 aa31.3■■■□□ 2.6
PDCD2-214ENST00000545869 TNS4Q8IZW8 715 aa31.3■■■□□ 2.6
PDCD2-214ENST00000545869 PNISRQ8TF01 805 aaKnown RBP31.3■■■□□ 2.6
PDCD2-214ENST00000545869 NIP7Q9Y221 180 aaKnown RBP eCLIP31.3■■■□□ 2.6
PDCD2-214ENST00000545869 ZNF541Q9H0D2 1346 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 SCN4AP35499 1836 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 FAM177BA6PVY3 158 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 CAPN15O75808 1086 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 NPR1P16066 1061 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 CCDC93Q567U6 631 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 MIS18AQ9NYP9 233 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 ZNF652Q9Y2D9 606 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 KDM3BQ7LBC6 1761 aa31.29■■■□□ 2.6
PDCD2-214ENST00000545869 L3MBTL3Q96JM7 780 aaPredicted RBP31.27■■■□□ 2.6
PDCD2-214ENST00000545869 ZNF277Q9NRM2 450 aaPredicted RBP31.27■■■□□ 2.6
PDCD2-214ENST00000545869 SNED1Q8TER0 1413 aa31.26■■■□□ 2.6
PDCD2-214ENST00000545869 CREBZFQ9NS37 354 aa31.26■■■□□ 2.59
PDCD2-214ENST00000545869 MKRN1Q9UHC7 482 aaKnown RBP31.26■■■□□ 2.59
PDCD2-214ENST00000545869 ABCC12Q96J65 1359 aa31.26■■■□□ 2.59
PDCD2-214ENST00000545869 FKBP4Q02790 459 aaKnown RBP eCLIP31.25■■■□□ 2.59
PDCD2-214ENST00000545869 TAF1DQ9H5J8 278 aaPredicted RBP31.25■■■□□ 2.59
PDCD2-214ENST00000545869 ADAMTSL1Q8N6G6 1762 aa31.25■■■□□ 2.59
PDCD2-214ENST00000545869 HTATSF1O43719 755 aaKnown RBP31.24■■■□□ 2.59
PDCD2-214ENST00000545869 TPTE2Q6XPS3 522 aa31.24■■■□□ 2.59
PDCD2-214ENST00000545869 NUP98P52948 1817 aa31.24■■■□□ 2.59
PDCD2-214ENST00000545869 PASKQ96RG2 1323 aa31.24■■■□□ 2.59
PDCD2-214ENST00000545869 RGL2O15211 777 aa31.23■■■□□ 2.59
PDCD2-214ENST00000545869 TAF7Q15545 349 aaPredicted RBP31.22■■■□□ 2.59
PDCD2-214ENST00000545869 ADAMTS8Q9UP79 889 aa31.22■■■□□ 2.59
PDCD2-214ENST00000545869 COL4A5P29400 1685 aa31.21■■■□□ 2.59
PDCD2-214ENST00000545869 SLC51AQ86UW1 340 aa31.2■■■□□ 2.59
PDCD2-214ENST00000545869 LDHDQ86WU2 507 aa31.2■■■□□ 2.59
PDCD2-214ENST00000545869 PNNQ9H307 717 aaKnown RBP31.2■■■□□ 2.59
PDCD2-214ENST00000545869 IQCA1LA6NCM1 817 aa31.19■■■□□ 2.58
PDCD2-214ENST00000545869 NUTM1Q86Y26 1132 aa31.18■■■□□ 2.58
PDCD2-214ENST00000545869 NGEFQ8N5V2 710 aa31.18■■■□□ 2.58
PDCD2-214ENST00000545869 CNTNAP1P78357 1384 aa31.17■■■□□ 2.58
PDCD2-214ENST00000545869 ITGBL1O95965 494 aaPredicted RBP31.16■■■□□ 2.58
PDCD2-214ENST00000545869 CRY2Q49AN0 593 aa31.16■■■□□ 2.58
PDCD2-214ENST00000545869 TTLL7Q6ZT98 887 aa31.16■■■□□ 2.58
PDCD2-214ENST00000545869 THUMPD2Q9BTF0 503 aaKnown RBP31.16■■■□□ 2.58
PDCD2-214ENST00000545869 IARSP41252 1262 aaKnown RBP31.15■■■□□ 2.58
PDCD2-214ENST00000545869 RTKN2Q8IZC4 609 aa31.15■■■□□ 2.58
PDCD2-214ENST00000545869 FAM9BQ8IZU0 186 aa31.15■■■□□ 2.58
PDCD2-214ENST00000545869 SYNE4Q8N205 404 aa31.15■■■□□ 2.58
PDCD2-214ENST00000545869 FZD9O00144 591 aa31.14■■■□□ 2.58
PDCD2-214ENST00000545869 EAPPQ56P03 285 aaPredicted RBP31.14■■■□□ 2.58
PDCD2-214ENST00000545869 PLEKHF1Q96S99 279 aa31.14■■■□□ 2.58
PDCD2-214ENST00000545869 RNF123Q5XPI4 1314 aa31.14■■■□□ 2.58
PDCD2-214ENST00000545869 UBN2Q6ZU65 1347 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms