RNA–Protein interactions for RNA: ENST00000545855.1

ARF3-210, Transcript of ADP ribosylation factor 3, humanhuman

TSL 2

Gene ARF3, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-210ENST00000545855 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
ARF3-210ENST00000545855 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
ARF3-210ENST00000545855 KIF3CO14782 793 aa12.71□□□□□ -0.37
ARF3-210ENST00000545855 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
ARF3-210ENST00000545855 C8orf58Q8NAV2 365 aa12.71□□□□□ -0.37
ARF3-210ENST00000545855 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
ARF3-210ENST00000545855 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
ARF3-210ENST00000545855 BRCA1P38398 1863 aaKnown RBP12.71□□□□□ -0.37
ARF3-210ENST00000545855 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.38
ARF3-210ENST00000545855 SERPINB2P05120 415 aa12.7□□□□□ -0.38
ARF3-210ENST00000545855 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
ARF3-210ENST00000545855 CHRNA5P30532 468 aa12.7□□□□□ -0.38
ARF3-210ENST00000545855 IL6STP40189 918 aaPredicted RBP12.7□□□□□ -0.38
ARF3-210ENST00000545855 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
ARF3-210ENST00000545855 ZNF526Q8TF50 670 aaPredicted RBP12.7□□□□□ -0.38
ARF3-210ENST00000545855 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
ARF3-210ENST00000545855 VAMP4O75379 141 aa12.69□□□□□ -0.38
ARF3-210ENST00000545855 KRT24Q2M2I5 525 aa12.69□□□□□ -0.38
ARF3-210ENST00000545855 TWISTNBQ3B726 338 aaPredicted RBP12.69□□□□□ -0.38
ARF3-210ENST00000545855 TSPYL6Q8N831 410 aa12.69□□□□□ -0.38
ARF3-210ENST00000545855 ARFGEF1Q9Y6D6 1849 aa12.68□□□□□ -0.38
ARF3-210ENST00000545855 HSPA6P17066 643 aa12.67□□□□□ -0.38
ARF3-210ENST00000545855 PDIA6Q15084 440 aa12.67□□□□□ -0.38
ARF3-210ENST00000545855 HDGFL1Q5TGJ6 251 aa12.67□□□□□ -0.38
ARF3-210ENST00000545855 CCDC30Q5VVM6 783 aa12.67□□□□□ -0.38
ARF3-210ENST00000545855 C9orf131Q5VYM1 1079 aa12.67□□□□□ -0.38
ARF3-210ENST00000545855 LRP10Q7Z4F1 713 aa12.67□□□□□ -0.38
ARF3-210ENST00000545855 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
ARF3-210ENST00000545855 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 RGL2O15211 777 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 CAMTA2O94983 1202 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 A1BGP04217 495 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 TBC1D9BQ66K14 1250 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
ARF3-210ENST00000545855 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
ARF3-210ENST00000545855 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 SCN7AQ01118 1682 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 CARMIL3Q8ND23 1372 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
ARF3-210ENST00000545855 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
ARF3-210ENST00000545855 TOMM70O94826 608 aa12.65□□□□□ -0.38
ARF3-210ENST00000545855 BRPF1P55201 1214 aaPredicted RBP12.65□□□□□ -0.38
ARF3-210ENST00000545855 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.38
ARF3-210ENST00000545855 TTLL6Q8N841 843 aa12.65□□□□□ -0.38
ARF3-210ENST00000545855 BRIP1Q9BX63 1249 aa12.65□□□□□ -0.38
ARF3-210ENST00000545855 H0YIN7 160 aa12.64□□□□□ -0.39
ARF3-210ENST00000545855 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
ARF3-210ENST00000545855 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
ARF3-210ENST00000545855 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
ARF3-210ENST00000545855 BICDL1Q6ZP65 573 aa12.64□□□□□ -0.39
ARF3-210ENST00000545855 C2CD5Q86YS7 1000 aa12.64□□□□□ -0.39
ARF3-210ENST00000545855 HYPKQ9NX55 129 aa12.64□□□□□ -0.39
ARF3-210ENST00000545855 RNF181Q9P0P0 153 aa12.64□□□□□ -0.39
ARF3-210ENST00000545855 TBC1D2BQ9UPU7 963 aa12.64□□□□□ -0.39
ARF3-210ENST00000545855 AFDNP55196 1824 aaKnown RBP12.63□□□□□ -0.39
ARF3-210ENST00000545855 PDE6BP35913 854 aa12.63□□□□□ -0.39
ARF3-210ENST00000545855 CLEC4GQ6UXB4 293 aa12.63□□□□□ -0.39
ARF3-210ENST00000545855 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
ARF3-210ENST00000545855 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
ARF3-210ENST00000545855 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
ARF3-210ENST00000545855 DLEC1Q9Y238 1755 aa12.63□□□□□ -0.39
ARF3-210ENST00000545855 GOLGB1Q14789 3259 aaKnown RBP12.63□□□□□ -0.39
ARF3-210ENST00000545855 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
ARF3-210ENST00000545855 YTHDC1Q96MU7 727 aaKnown RBP12.62□□□□□ -0.39
ARF3-210ENST00000545855 SETDB2Q96T68 719 aa12.62□□□□□ -0.39
ARF3-210ENST00000545855 STK31Q9BXU1 1019 aa12.62□□□□□ -0.39
ARF3-210ENST00000545855 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
ARF3-210ENST00000545855 ZNF330Q9Y3S2 320 aaPredicted RBP12.62□□□□□ -0.39
ARF3-210ENST00000545855 LMNB1P20700 586 aa12.61□□□□□ -0.39
ARF3-210ENST00000545855 PROSER3Q2NL68 480 aa12.61□□□□□ -0.39
ARF3-210ENST00000545855 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
ARF3-210ENST00000545855 NUP98P52948 1817 aa12.6□□□□□ -0.39
ARF3-210ENST00000545855 ERVV-1B6SEH8 477 aa12.6□□□□□ -0.39
ARF3-210ENST00000545855 NFKBIEO00221 500 aa12.6□□□□□ -0.39
ARF3-210ENST00000545855 PRELPP51888 382 aa12.6□□□□□ -0.39
ARF3-210ENST00000545855 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
ARF3-210ENST00000545855 RASSF7Q02833 373 aa12.6□□□□□ -0.39
ARF3-210ENST00000545855 CNBD1Q8NA66 436 aa12.6□□□□□ -0.39
ARF3-210ENST00000545855 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
ARF3-210ENST00000545855 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 MYL6BP14649 208 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 APLP1P51693 650 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 ST5P78524 1137 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 FSTL1Q12841 308 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
ARF3-210ENST00000545855 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 NECTIN2Q92692 538 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 ZNF652Q9Y2D9 606 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
ARF3-210ENST00000545855 KLRG2A4D1S0 409 aaPredicted RBP12.58□□□□□ -0.4
ARF3-210ENST00000545855 GLTPD2A6NH11 291 aa12.58□□□□□ -0.4
ARF3-210ENST00000545855 SRGNP10124 158 aa12.58□□□□□ -0.4
ARF3-210ENST00000545855 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.4
ARF3-210ENST00000545855 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
ARF3-210ENST00000545855 CNKSR1Q969H4 720 aa12.58□□□□□ -0.4
ARF3-210ENST00000545855 LTBP3Q9NS15 1303 aa12.58□□□□□ -0.4
ARF3-210ENST00000545855 ANXA1P04083 346 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms