RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ASXL2Q76L83 1435 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 GOLGA6L9A6NEM1 432 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 KIAA0754O94854 1291 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 KANK3Q6NY19 840 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 ZHX3Q9H4I2 956 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 MAST1Q9Y2H9 1570 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 TAF3Q5VWG9 929 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 TMCO3Q6UWJ1 677 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 KIF5CO60282 957 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 PCDHB15Q9Y5E8 787 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 RIMS2Q9UQ26 1411 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 PPP1R12BO60237 982 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-209ENST00000545689 SNRPA1P09661 255 aaKnown RBP14.54□□□□□ -0.08
COL4A6-209ENST00000545689 SDSP20132 328 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 ATP8B2P98198 1209 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 TMEM132AQ24JP5 1023 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 C8orf34Q49A92 452 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 SLF2Q8IX21 1173 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 LRSAM1Q6UWE0 723 aa14.54□□□□□ -0.08
COL4A6-209ENST00000545689 KIF20AO95235 890 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 ZSCAN22P10073 491 aaPredicted RBP14.53□□□□□ -0.08
COL4A6-209ENST00000545689 JAKMIP3Q5VZ66 844 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 FSIP1Q8NA03 581 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 ABCF2Q9UG63 623 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 ABCC1P33527 1531 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 PZPP20742 1482 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 ZFYP08048 801 aaPredicted RBP14.53□□□□□ -0.08
COL4A6-209ENST00000545689 MAP9Q49MG5 647 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 MPNDQ8N594 471 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 CASQ1P31415 396 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 USP5P45974 858 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 PDE1AP54750 535 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 SPA17Q15506 151 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 FAM177A1Q8N128 213 aaPredicted RBP14.53□□□□□ -0.08
COL4A6-209ENST00000545689 PDCL3Q9H2J4 239 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 TMX3Q96JJ7 454 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 ESYT1Q9BSJ8 1104 aa14.53□□□□□ -0.08
COL4A6-209ENST00000545689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL4A6-209ENST00000545689 TRMT112Q9UI30 125 aaKnown RBP14.53□□□□□ -0.08
COL4A6-209ENST00000545689 UQCRFS1P1P0C7P4 283 aa14.52□□□□□ -0.08
COL4A6-209ENST00000545689 ANKRD18AQ8IVF6 992 aa14.52□□□□□ -0.08
COL4A6-209ENST00000545689 ZMYM4Q5VZL5 1548 aa14.52□□□□□ -0.08
COL4A6-209ENST00000545689 PI4KAP2A4QPH2 592 aa14.52□□□□□ -0.08
COL4A6-209ENST00000545689 PI4KAP1Q8N8J0 262 aa14.52□□□□□ -0.08
COL4A6-209ENST00000545689 NCOA7Q8NI08 942 aa14.52□□□□□ -0.08
COL4A6-209ENST00000545689 ZSCAN23Q3MJ62 389 aa14.52□□□□□ -0.09
COL4A6-209ENST00000545689 CATIPQ7Z7H3 387 aa14.52□□□□□ -0.09
COL4A6-209ENST00000545689 TSPYL1Q9H0U9 437 aa14.52□□□□□ -0.09
COL4A6-209ENST00000545689 TTC41PQ6P2S7 1318 aa14.52□□□□□ -0.09
COL4A6-209ENST00000545689 FAM83GA6ND36 823 aa14.52□□□□□ -0.09
COL4A6-209ENST00000545689 PTCD1O75127 700 aaKnown RBP14.52□□□□□ -0.09
COL4A6-209ENST00000545689 CNNM3Q8NE01 707 aa14.52□□□□□ -0.09
COL4A6-209ENST00000545689 KRT28Q7Z3Y7 464 aa14.52□□□□□ -0.09
COL4A6-209ENST00000545689 CCDC150Q8NCX0 1101 aa14.52□□□□□ -0.09
COL4A6-209ENST00000545689 IFIT3O14879 490 aaKnown RBP14.51□□□□□ -0.09
COL4A6-209ENST00000545689 ZNF76P36508 570 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 TMEM266Q2M3C6 531 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 USP25Q9UHP3 1055 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 CCDC12Q8WUD4 166 aaPredicted RBP14.51□□□□□ -0.09
COL4A6-209ENST00000545689 CCDC85AQ96PX6 553 aaPredicted RBP14.51□□□□□ -0.09
COL4A6-209ENST00000545689 MKNK2Q9HBH9 465 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
COL4A6-209ENST00000545689 GOLGA6L7A0A1B0GV03 622 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 POLR3DP05423 398 aaPredicted RBP14.51□□□□□ -0.09
COL4A6-209ENST00000545689 SSBP05455 408 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL4A6-209ENST00000545689 ANKRD24Q8TF21 1146 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 FLT4P35916 1363 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 NPATQ14207 1427 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 TRAPPC8Q9Y2L5 1435 aa14.51□□□□□ -0.09
COL4A6-209ENST00000545689 PRIMPOLQ96LW4 560 aa14.5□□□□□ -0.09
COL4A6-209ENST00000545689 MINDY4BA8MYZ0 360 aa14.5□□□□□ -0.09
COL4A6-209ENST00000545689 ZPR1O75312 459 aa14.5□□□□□ -0.09
COL4A6-209ENST00000545689 AKAP4Q5JQC9 854 aa14.5□□□□□ -0.09
COL4A6-209ENST00000545689 TMOD2Q9NZR1 351 aa14.5□□□□□ -0.09
COL4A6-209ENST00000545689 ADCY5O95622 1261 aa14.5□□□□□ -0.09
COL4A6-209ENST00000545689 RBM5P52756 815 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL4A6-209ENST00000545689 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
COL4A6-209ENST00000545689 IARSP41252 1262 aaKnown RBP14.5□□□□□ -0.09
COL4A6-209ENST00000545689 KIF5BP33176 963 aa14.5□□□□□ -0.09
COL4A6-209ENST00000545689 SMC5Q8IY18 1101 aa14.5□□□□□ -0.09
COL4A6-209ENST00000545689 GOLIM4O00461 696 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 YEATS4O95619 227 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 TNIP1Q15025 636 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 MEIS3Q99687 375 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 DCTPP1Q9H773 170 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 USP16Q9Y5T5 823 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 TRPM2O94759 1503 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 BMP15O95972 392 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 ZRSR2Q15696 482 aaKnown RBP14.49□□□□□ -0.09
COL4A6-209ENST00000545689 CDC5LQ99459 802 aaKnown RBP14.49□□□□□ -0.09
COL4A6-209ENST00000545689 NUTM2BA6NNL0 878 aaPredicted RBP14.49□□□□□ -0.09
COL4A6-209ENST00000545689 NUTM2EB1AL46 878 aaPredicted RBP14.49□□□□□ -0.09
COL4A6-209ENST00000545689 TNNT1P13805 278 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 USP8P40818 1118 aa14.49□□□□□ -0.09
COL4A6-209ENST00000545689 NUTM2AQ8IVF1 878 aaPredicted RBP14.49□□□□□ -0.09
COL4A6-209ENST00000545689 VPS36Q86VN1 386 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 ZNF444Q8N0Y2 327 aaPredicted RBP14.48□□□□□ -0.09
COL4A6-209ENST00000545689 CCDC194A0A1B0GVG4 234 aa14.48□□□□□ -0.09
COL4A6-209ENST00000545689 FAM114A1Q8IWE2 563 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms