RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 RIPK4P57078 832 aa27.85■■■□□ 2.05
SCARB1-210ENST00000545493 NUP98P52948 1817 aa27.85■■■□□ 2.05
SCARB1-210ENST00000545493 FER1L6Q2WGJ9 1857 aa27.85■■■□□ 2.05
SCARB1-210ENST00000545493 TMPOP42166 694 aaKnown RBP27.84■■■□□ 2.05
SCARB1-210ENST00000545493 ST5P78524 1137 aa27.84■■■□□ 2.05
SCARB1-210ENST00000545493 CCDC146Q8IYE0 955 aa27.84■■■□□ 2.05
SCARB1-210ENST00000545493 PDZRN3Q9UPQ7 1066 aa27.84■■■□□ 2.05
SCARB1-210ENST00000545493 HLFQ16534 295 aa27.83■■■□□ 2.05
SCARB1-210ENST00000545493 TSPYL4Q9UJ04 414 aa27.83■■■□□ 2.05
SCARB1-210ENST00000545493 SLX4Q8IY92 1834 aa27.83■■■□□ 2.05
SCARB1-210ENST00000545493 NFKBIEO00221 500 aa27.82■■■□□ 2.04
SCARB1-210ENST00000545493 PRKRIP1Q9H875 184 aaPredicted RBP27.82■■■□□ 2.04
SCARB1-210ENST00000545493 NMRK2Q9NPI5 230 aa27.82■■■□□ 2.04
SCARB1-210ENST00000545493 RRP7AQ9Y3A4 280 aaKnown RBP27.82■■■□□ 2.04
SCARB1-210ENST00000545493 CCDC88AQ3V6T2 1871 aa27.82■■■□□ 2.04
SCARB1-210ENST00000545493 NPHP1O15259 732 aa27.81■■■□□ 2.04
SCARB1-210ENST00000545493 NBPF5PQ86XG9 351 aaPredicted RBP27.81■■■□□ 2.04
SCARB1-210ENST00000545493 ZNF622Q969S3 477 aaKnown RBP eCLIP27.81■■■□□ 2.04
SCARB1-210ENST00000545493 NIP7Q9Y221 180 aaKnown RBP eCLIP27.81■■■□□ 2.04
SCARB1-210ENST00000545493 LMOD3Q0VAK6 560 aa27.79■■■□□ 2.04
SCARB1-210ENST00000545493 SRGNP10124 158 aa27.78■■■□□ 2.04
SCARB1-210ENST00000545493 TTLL7Q6ZT98 887 aa27.78■■■□□ 2.04
SCARB1-210ENST00000545493 ERBB4Q15303 1308 aa27.77■■■□□ 2.04
SCARB1-210ENST00000545493 MAP3K15Q6ZN16 1313 aa27.77■■■□□ 2.04
SCARB1-210ENST00000545493 ZC3H4Q9UPT8 1303 aaKnown RBP27.77■■■□□ 2.04
SCARB1-210ENST00000545493 LMNB1P20700 586 aa27.77■■■□□ 2.04
SCARB1-210ENST00000545493 WDR43Q15061 677 aaKnown RBP eCLIP27.77■■■□□ 2.04
SCARB1-210ENST00000545493 NGEFQ8N5V2 710 aa27.77■■■□□ 2.04
SCARB1-210ENST00000545493 DICER1Q9UPY3 1922 aaKnown RBP27.77■■■□□ 2.04
SCARB1-210ENST00000545493 ABCC12Q96J65 1359 aa27.76■■■□□ 2.03
SCARB1-210ENST00000545493 C21orf2O43822 256 aa27.76■■■□□ 2.03
SCARB1-210ENST00000545493 MYL6BP14649 208 aa27.76■■■□□ 2.03
SCARB1-210ENST00000545493 STYK1Q6J9G0 422 aa27.76■■■□□ 2.03
SCARB1-210ENST00000545493 RUNDC1Q96C34 613 aa27.76■■■□□ 2.03
SCARB1-210ENST00000545493 BABAM1Q9NWV8 329 aa27.76■■■□□ 2.03
SCARB1-210ENST00000545493 ZNF219Q9P2Y4 722 aaPredicted RBP27.76■■■□□ 2.03
SCARB1-210ENST00000545493 PRPF40BQ6NWY9 871 aaKnown RBP27.75■■■□□ 2.03
SCARB1-210ENST00000545493 MASTLQ96GX5 879 aa27.75■■■□□ 2.03
SCARB1-210ENST00000545493 FAM177BA6PVY3 158 aa27.74■■■□□ 2.03
SCARB1-210ENST00000545493 ERVV-1B6SEH8 477 aa27.74■■■□□ 2.03
SCARB1-210ENST00000545493 NEUROD2Q15784 382 aa27.74■■■□□ 2.03
SCARB1-210ENST00000545493 LRP10Q7Z4F1 713 aa27.74■■■□□ 2.03
SCARB1-210ENST00000545493 ADAMTS8Q9UP79 889 aa27.74■■■□□ 2.03
SCARB1-210ENST00000545493 TRIM35Q9UPQ4 493 aa27.74■■■□□ 2.03
SCARB1-210ENST00000545493 KLRG2A4D1S0 409 aaPredicted RBP27.73■■■□□ 2.03
SCARB1-210ENST00000545493 HSPA6P17066 643 aa27.73■■■□□ 2.03
SCARB1-210ENST00000545493 KIF6Q6ZMV9 814 aa27.73■■■□□ 2.03
SCARB1-210ENST00000545493 CNKSR1Q969H4 720 aa27.73■■■□□ 2.03
SCARB1-210ENST00000545493 UBN2Q6ZU65 1347 aa27.72■■■□□ 2.03
SCARB1-210ENST00000545493 KDM2BQ8NHM5 1336 aa27.72■■■□□ 2.03
SCARB1-210ENST00000545493 ZBTB3Q9H5J0 574 aa27.72■■■□□ 2.03
SCARB1-210ENST00000545493 ANKRD36CQ5JPF3 1778 aa27.72■■■□□ 2.03
SCARB1-210ENST00000545493 IBTKQ9P2D0 1353 aaPredicted RBP27.72■■■□□ 2.03
SCARB1-210ENST00000545493 PDIA6Q15084 440 aa27.71■■■□□ 2.03
SCARB1-210ENST00000545493 PROSER3Q2NL68 480 aa27.71■■■□□ 2.03
SCARB1-210ENST00000545493 TPTE2Q6XPS3 522 aa27.71■■■□□ 2.03
SCARB1-210ENST00000545493 RIC1Q4ADV7 1423 aa27.7■■■□□ 2.03
SCARB1-210ENST00000545493 TOMM70O94826 608 aa27.7■■■□□ 2.02
SCARB1-210ENST00000545493 LTBP3Q9NS15 1303 aa27.69■■■□□ 2.02
SCARB1-210ENST00000545493 ANXA1P04083 346 aa27.68■■■□□ 2.02
SCARB1-210ENST00000545493 NPR1P16066 1061 aa27.68■■■□□ 2.02
SCARB1-210ENST00000545493 EIF2S2P20042 333 aaKnown RBP27.68■■■□□ 2.02
SCARB1-210ENST00000545493 KRT24Q2M2I5 525 aa27.68■■■□□ 2.02
SCARB1-210ENST00000545493 CHL1O00533 1208 aa27.67■■■□□ 2.02
SCARB1-210ENST00000545493 GPTP24298 496 aa27.67■■■□□ 2.02
SCARB1-210ENST00000545493 NUTM1Q86Y26 1132 aa27.67■■■□□ 2.02
SCARB1-210ENST00000545493 TAOK3Q9H2K8 898 aa27.67■■■□□ 2.02
SCARB1-210ENST00000545493 WDR90Q96KV7 1748 aa27.67■■■□□ 2.02
SCARB1-210ENST00000545493 C7orf43Q8WVR3 580 aa27.66■■■□□ 2.02
SCARB1-210ENST00000545493 NYXQ9GZU5 481 aa27.66■■■□□ 2.02
SCARB1-210ENST00000545493 ZNF34Q8IZ26 560 aa27.65■■■□□ 2.02
SCARB1-210ENST00000545493 RBM46Q8TBY0 533 aaKnown RBP27.65■■■□□ 2.02
SCARB1-210ENST00000545493 RRAGCQ9HB90 399 aa27.65■■■□□ 2.02
SCARB1-210ENST00000545493 GLTPD2A6NH11 291 aa27.64■■■□□ 2.02
SCARB1-210ENST00000545493 ERFEQ4G0M1 354 aa27.64■■■□□ 2.02
SCARB1-210ENST00000545493 SOGA3Q5TF21 947 aa27.64■■■□□ 2.02
SCARB1-210ENST00000545493 GIGYF2Q6Y7W6 1299 aaKnown RBP27.64■■■□□ 2.02
SCARB1-210ENST00000545493 SNED1Q8TER0 1413 aa27.64■■■□□ 2.02
SCARB1-210ENST00000545493 NTSR2O95665 410 aa27.63■■■□□ 2.01
SCARB1-210ENST00000545493 CRY2Q49AN0 593 aa27.63■■■□□ 2.01
SCARB1-210ENST00000545493 SUSD4Q5VX71 490 aa27.63■■■□□ 2.01
SCARB1-210ENST00000545493 NECTIN2Q92692 538 aa27.63■■■□□ 2.01
SCARB1-210ENST00000545493 GTF2E1P29083 439 aaPredicted RBP27.62■■■□□ 2.01
SCARB1-210ENST00000545493 CCDC93Q567U6 631 aa27.62■■■□□ 2.01
SCARB1-210ENST00000545493 OLFM4Q6UX06 510 aa27.62■■■□□ 2.01
SCARB1-210ENST00000545493 LAS1LQ9Y4W2 734 aaKnown RBP27.62■■■□□ 2.01
SCARB1-210ENST00000545493 C16orf71Q8IYS4 520 aaPredicted RBP27.6■■■□□ 2.01
SCARB1-210ENST00000545493 LAMB2P55268 1798 aa27.6■■■□□ 2.01
SCARB1-210ENST00000545493 XAGE3Q8WTP9 111 aa27.58■■■□□ 2.01
SCARB1-210ENST00000545493 APAF1O14727 1248 aa27.57■■■□□ 2
SCARB1-210ENST00000545493 PARP10Q53GL7 1025 aa27.57■■■□□ 2
SCARB1-210ENST00000545493 C3orf67Q6ZVT6 689 aa27.57■■■□□ 2
SCARB1-210ENST00000545493 CFAP44Q96MT7 982 aa27.57■■■□□ 2
SCARB1-210ENST00000545493 DDX21Q9NR30 783 aaKnown RBP eCLIP27.57■■■□□ 2
SCARB1-210ENST00000545493 CHPF2Q9P2E5 772 aa27.57■■■□□ 2
SCARB1-210ENST00000545493 HOXB7P09629 217 aa27.56■■■□□ 2
SCARB1-210ENST00000545493 CCDC184Q52MB2 194 aa27.56■■■□□ 2
SCARB1-210ENST00000545493 COPS6Q7L5N1 327 aa27.56■■■□□ 2
SCARB1-210ENST00000545493 MBIPQ9NS73 344 aa27.56■■■□□ 2
SCARB1-210ENST00000545493 POTECB2RU33 542 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms