RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 ZDHHC9Q9Y397 364 aa22.89■■□□□ 1.26
MSLN-202ENST00000545450 AK9Q5TCS8 1911 aa22.89■■□□□ 1.25
MSLN-202ENST00000545450 PRIM1P49642 420 aaKnown RBP22.89■■□□□ 1.25
MSLN-202ENST00000545450 CEP85Q6P2H3 762 aa22.89■■□□□ 1.25
MSLN-202ENST00000545450 ZGPATQ8N5A5 531 aaKnown RBP22.89■■□□□ 1.25
MSLN-202ENST00000545450 GPT2Q8TD30 523 aa22.89■■□□□ 1.25
MSLN-202ENST00000545450 ZNF500O60304 480 aaPredicted RBP22.88■■□□□ 1.25
MSLN-202ENST00000545450 TOM1O60784 492 aa22.88■■□□□ 1.25
MSLN-202ENST00000545450 GLI3P10071 1580 aa22.88■■□□□ 1.25
MSLN-202ENST00000545450 PRPF40AO75400 957 aaKnown RBP22.87■■□□□ 1.25
MSLN-202ENST00000545450 CABP4P57796 275 aa22.87■■□□□ 1.25
MSLN-202ENST00000545450 PROSER3Q2NL68 480 aa22.87■■□□□ 1.25
MSLN-202ENST00000545450 DBF4Q9UBU7 674 aaPredicted RBP22.87■■□□□ 1.25
MSLN-202ENST00000545450 TOGARAM1Q9Y4F4 1720 aa22.87■■□□□ 1.25
MSLN-202ENST00000545450 ZNF496Q96IT1 587 aaPredicted RBP22.87■■□□□ 1.25
MSLN-202ENST00000545450 PKNOX2Q96KN3 472 aa22.87■■□□□ 1.25
MSLN-202ENST00000545450 REC8O95072 547 aa22.86■■□□□ 1.25
MSLN-202ENST00000545450 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.86■■□□□ 1.25
MSLN-202ENST00000545450 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
MSLN-202ENST00000545450 DDX54Q8TDD1 881 aaKnown RBP22.86■■□□□ 1.25
MSLN-202ENST00000545450 WNK3Q9BYP7 1800 aa22.85■■□□□ 1.25
MSLN-202ENST00000545450 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
MSLN-202ENST00000545450 NRAPQ86VF7 1730 aa22.84■■□□□ 1.25
MSLN-202ENST00000545450 PAPPAQ13219 1627 aa22.84■■□□□ 1.25
MSLN-202ENST00000545450 TTC5Q8N0Z6 440 aa22.84■■□□□ 1.25
MSLN-202ENST00000545450 DISP2A7MBM2 1401 aa22.84■■□□□ 1.25
MSLN-202ENST00000545450 ADCY9O60503 1353 aa22.84■■□□□ 1.25
MSLN-202ENST00000545450 RBM27Q9P2N5 1060 aaKnown RBP22.83■■□□□ 1.25
MSLN-202ENST00000545450 PI4KAP2A4QPH2 592 aa22.83■■□□□ 1.24
MSLN-202ENST00000545450 ERC2O15083 957 aa22.83■■□□□ 1.24
MSLN-202ENST00000545450 ADAMTS2O95450 1211 aa22.83■■□□□ 1.24
MSLN-202ENST00000545450 LRSAM1Q6UWE0 723 aa22.83■■□□□ 1.24
MSLN-202ENST00000545450 PI4KAP1Q8N8J0 262 aa22.83■■□□□ 1.24
MSLN-202ENST00000545450 LAMB4A4D0S4 1761 aa22.83■■□□□ 1.24
MSLN-202ENST00000545450 SMARCA5O60264 1052 aaPredicted RBP22.82■■□□□ 1.24
MSLN-202ENST00000545450 PDIA6Q15084 440 aa22.82■■□□□ 1.24
MSLN-202ENST00000545450 ERVV-2B6SEH9 535 aa22.82■■□□□ 1.24
MSLN-202ENST00000545450 TMEM63CQ9P1W3 806 aa22.82■■□□□ 1.24
MSLN-202ENST00000545450 MCM5P33992 734 aa22.81■■□□□ 1.24
MSLN-202ENST00000545450 DNAAF4Q8WXU2 420 aa22.81■■□□□ 1.24
MSLN-202ENST00000545450 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
MSLN-202ENST00000545450 DDX21Q9NR30 783 aaKnown RBP eCLIP22.8■■□□□ 1.24
MSLN-202ENST00000545450 OSBPL3Q9H4L5 887 aa22.8■■□□□ 1.24
MSLN-202ENST00000545450 HYPKQ9NX55 129 aa22.8■■□□□ 1.24
MSLN-202ENST00000545450 ZKSCAN5Q9Y2L8 839 aa22.8■■□□□ 1.24
MSLN-202ENST00000545450 UBAP1LF5GYI3 381 aa22.79■■□□□ 1.24
MSLN-202ENST00000545450 GNAI2P04899 355 aa22.79■■□□□ 1.24
MSLN-202ENST00000545450 SNRPA1P09661 255 aaKnown RBP22.79■■□□□ 1.24
MSLN-202ENST00000545450 USP44Q9H0E7 712 aa22.79■■□□□ 1.24
MSLN-202ENST00000545450 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
MSLN-202ENST00000545450 GNAI3P08754 354 aa22.79■■□□□ 1.24
MSLN-202ENST00000545450 BEND3Q5T5X7 828 aa22.79■■□□□ 1.24
MSLN-202ENST00000545450 KCPQ6ZWJ8 1503 aa22.78■■□□□ 1.24
MSLN-202ENST00000545450 SRCIN1Q9C0H9 1055 aa22.78■■□□□ 1.24
MSLN-202ENST00000545450 ITGB4P16144 1822 aa22.78■■□□□ 1.24
MSLN-202ENST00000545450 NUTM2BA6NNL0 878 aaPredicted RBP22.77■■□□□ 1.24
MSLN-202ENST00000545450 NUTM2EB1AL46 878 aaPredicted RBP22.77■■□□□ 1.24
MSLN-202ENST00000545450 NUTM2AQ8IVF1 878 aaPredicted RBP22.77■■□□□ 1.24
MSLN-202ENST00000545450 R3HCC1Q9Y3T6 440 aaKnown RBP22.77■■□□□ 1.24
MSLN-202ENST00000545450 MBD3O95983 291 aa22.77■■□□□ 1.24
MSLN-202ENST00000545450 NSFL1CQ9UNZ2 370 aaKnown RBP22.77■■□□□ 1.24
MSLN-202ENST00000545450 SYCE3A1L190 88 aa22.76■■□□□ 1.23
MSLN-202ENST00000545450 APBB1O00213 710 aa22.76■■□□□ 1.23
MSLN-202ENST00000545450 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
MSLN-202ENST00000545450 MCM2P49736 904 aa22.76■■□□□ 1.23
MSLN-202ENST00000545450 TMX3Q96JJ7 454 aa22.76■■□□□ 1.23
MSLN-202ENST00000545450 CHAMP1Q96JM3 812 aa22.76■■□□□ 1.23
MSLN-202ENST00000545450 NWD2Q9ULI1 1742 aa22.75■■□□□ 1.23
MSLN-202ENST00000545450 PDE1AP54750 535 aa22.75■■□□□ 1.23
MSLN-202ENST00000545450 CSPP1Q1MSJ5 1256 aa22.75■■□□□ 1.23
MSLN-202ENST00000545450 KSR2Q6VAB6 950 aa22.75■■□□□ 1.23
MSLN-202ENST00000545450 HMMRO75330 724 aa22.74■■□□□ 1.23
MSLN-202ENST00000545450 BRD1O95696 1058 aa22.74■■□□□ 1.23
MSLN-202ENST00000545450 MYL6BP14649 208 aa22.74■■□□□ 1.23
MSLN-202ENST00000545450 CCDC39Q9UFE4 941 aa22.74■■□□□ 1.23
MSLN-202ENST00000545450 LRRFIP2Q9Y608 721 aaKnown RBP22.74■■□□□ 1.23
MSLN-202ENST00000545450 NEK4P51957 841 aa22.74■■□□□ 1.23
MSLN-202ENST00000545450 AIMP1Q12904 312 aaKnown RBP22.74■■□□□ 1.23
MSLN-202ENST00000545450 CUL4AQ13619 759 aa22.74■■□□□ 1.23
MSLN-202ENST00000545450 TNS2Q63HR2 1409 aa22.74■■□□□ 1.23
MSLN-202ENST00000545450 UBTFL1P0CB47 393 aaPredicted RBP22.73■■□□□ 1.23
MSLN-202ENST00000545450 LRP10Q7Z4F1 713 aa22.73■■□□□ 1.23
MSLN-202ENST00000545450 MAP7D2Q96T17 732 aa22.73■■□□□ 1.23
MSLN-202ENST00000545450 KAT6BQ8WYB5 2073 aa22.73■■□□□ 1.23
MSLN-202ENST00000545450 PIP4K2AP48426 406 aaPredicted RBP22.73■■□□□ 1.23
MSLN-202ENST00000545450 SPATA31A1Q5TZJ5 1347 aa22.71■■□□□ 1.23
MSLN-202ENST00000545450 PNMA6EA0A0J9YXQ4 647 aa22.71■■□□□ 1.23
MSLN-202ENST00000545450 NBPF7P0C2Y1 421 aaPredicted RBP22.71■■□□□ 1.23
MSLN-202ENST00000545450 RBM10P98175 930 aaKnown RBP22.71■■□□□ 1.23
MSLN-202ENST00000545450 SLIT2O94813 1529 aa22.71■■□□□ 1.23
MSLN-202ENST00000545450 XAGE3Q8WTP9 111 aa22.7■■□□□ 1.23
MSLN-202ENST00000545450 INTS4Q96HW7 963 aaKnown RBP22.7■■□□□ 1.23
MSLN-202ENST00000545450 TMOD3Q9NYL9 352 aa22.7■■□□□ 1.23
MSLN-202ENST00000545450 DDX58O95786 925 aaKnown RBP22.7■■□□□ 1.22
MSLN-202ENST00000545450 ATP8B2P98198 1209 aa22.7■■□□□ 1.22
MSLN-202ENST00000545450 LRP6O75581 1613 aa22.69■■□□□ 1.22
MSLN-202ENST00000545450 COPS6Q7L5N1 327 aa22.69■■□□□ 1.22
MSLN-202ENST00000545450 ESYT1Q9BSJ8 1104 aa22.69■■□□□ 1.22
MSLN-202ENST00000545450 ARFGEF2Q9Y6D5 1785 aa22.69■■□□□ 1.22
MSLN-202ENST00000545450 SALL3Q9BXA9 1300 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 779.6 ms