RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 HOXB7P09629 217 aa12.18□□□□□ -0.46
CDK2AP1-206ENST00000544658 C4AP0C0L4 1744 aa12.17□□□□□ -0.46
CDK2AP1-206ENST00000544658 GNPATO15228 680 aa12.17□□□□□ -0.46
CDK2AP1-206ENST00000544658 STARD3NLO95772 234 aa12.17□□□□□ -0.46
CDK2AP1-206ENST00000544658 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
CDK2AP1-206ENST00000544658 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
CDK2AP1-206ENST00000544658 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
CDK2AP1-206ENST00000544658 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
CDK2AP1-206ENST00000544658 PNPLA7Q6ZV29 1317 aa12.16□□□□□ -0.46
CDK2AP1-206ENST00000544658 CACNA1FO60840 1977 aa12.16□□□□□ -0.46
CDK2AP1-206ENST00000544658 RPS6KA4O75676 772 aa12.16□□□□□ -0.46
CDK2AP1-206ENST00000544658 PHF14O94880 888 aa12.16□□□□□ -0.46
CDK2AP1-206ENST00000544658 COL23A1Q86Y22 540 aaPredicted RBP12.16□□□□□ -0.46
CDK2AP1-206ENST00000544658 XAGE3Q8WTP9 111 aa12.16□□□□□ -0.46
CDK2AP1-206ENST00000544658 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDK2AP1-206ENST00000544658 AIMP1Q12904 312 aaKnown RBP12.15□□□□□ -0.46
CDK2AP1-206ENST00000544658 SLC15A2Q16348 729 aa12.15□□□□□ -0.46
CDK2AP1-206ENST00000544658 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.46
CDK2AP1-206ENST00000544658 COPS6Q7L5N1 327 aa12.15□□□□□ -0.46
CDK2AP1-206ENST00000544658 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
CDK2AP1-206ENST00000544658 BCL2L12Q9HB09 334 aa12.15□□□□□ -0.46
CDK2AP1-206ENST00000544658 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
CDK2AP1-206ENST00000544658 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
CDK2AP1-206ENST00000544658 SRCAPQ6ZRS2 3230 aa12.15□□□□□ -0.47
CDK2AP1-206ENST00000544658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
CDK2AP1-206ENST00000544658 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
CDK2AP1-206ENST00000544658 HLFQ16534 295 aa12.14□□□□□ -0.47
CDK2AP1-206ENST00000544658 ZNF428Q96B54 188 aa12.14□□□□□ -0.47
CDK2AP1-206ENST00000544658 AK7Q96M32 723 aa12.14□□□□□ -0.47
CDK2AP1-206ENST00000544658 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
CDK2AP1-206ENST00000544658 DBF4Q9UBU7 674 aaPredicted RBP12.14□□□□□ -0.47
CDK2AP1-206ENST00000544658 NUP98P52948 1817 aa12.14□□□□□ -0.47
CDK2AP1-206ENST00000544658 PSDA5PKW4 1024 aaPredicted RBP12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 PLIN1O60240 522 aa12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 SMC4Q9NTJ3 1288 aa12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 TFCP2L1Q9NZI6 479 aa12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 RCAN3Q9UKA8 241 aa12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 NOB1Q9ULX3 412 aaKnown RBP12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 COL15A1P39059 1388 aa12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
CDK2AP1-206ENST00000544658 ERBB4Q15303 1308 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 F6X3S4 739 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 CAMTA2O94983 1202 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 CT47B1P0C2W7 299 aaPredicted RBP12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 FLIIQ13045 1269 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 ALDH1L2Q3SY69 923 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 ZBTB3Q9H5J0 574 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 ADCY9O60503 1353 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 CASZ1Q86V15 1759 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
CDK2AP1-206ENST00000544658 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
CDK2AP1-206ENST00000544658 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
CDK2AP1-206ENST00000544658 ARXQ96QS3 562 aa12.11□□□□□ -0.47
CDK2AP1-206ENST00000544658 HYPKQ9NX55 129 aa12.11□□□□□ -0.47
CDK2AP1-206ENST00000544658 RLBP1P12271 317 aa12.1□□□□□ -0.47
CDK2AP1-206ENST00000544658 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
CDK2AP1-206ENST00000544658 FKBP8Q14318 412 aa12.1□□□□□ -0.47
CDK2AP1-206ENST00000544658 C20orf194Q5TEA3 1177 aa12.1□□□□□ -0.47
CDK2AP1-206ENST00000544658 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
CDK2AP1-206ENST00000544658 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
CDK2AP1-206ENST00000544658 SCN7AQ01118 1682 aa12.1□□□□□ -0.47
CDK2AP1-206ENST00000544658 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
CDK2AP1-206ENST00000544658 SSFA2P28290 1259 aa12.09□□□□□ -0.47
CDK2AP1-206ENST00000544658 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
CDK2AP1-206ENST00000544658 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
CDK2AP1-206ENST00000544658 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
CDK2AP1-206ENST00000544658 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
CDK2AP1-206ENST00000544658 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
CDK2AP1-206ENST00000544658 GYS1P13807 737 aa12.08□□□□□ -0.48
CDK2AP1-206ENST00000544658 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
CDK2AP1-206ENST00000544658 FRAT1Q92837 279 aaPredicted RBP12.08□□□□□ -0.48
CDK2AP1-206ENST00000544658 MAP3K2Q9Y2U5 619 aa12.08□□□□□ -0.48
CDK2AP1-206ENST00000544658 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 IGKV5-2P06315 115 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 TRIM27P14373 513 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 RFC4P35249 363 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 FKBP5Q13451 457 aaPredicted RBP12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 TBC1D9BQ66K14 1250 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 PANK1Q8TE04 598 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 JARID2Q92833 1246 aaPredicted RBP12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 ANKRD36CQ5JPF3 1778 aa12.07□□□□□ -0.48
CDK2AP1-206ENST00000544658 ZBTB7AO95365 584 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 GPTP24298 496 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 DDR1Q08345 913 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 SYNE4Q8N205 404 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 MYD88Q99836 296 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 AFDNP55196 1824 aaKnown RBP12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 RNF123Q5XPI4 1314 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 COL24A1Q17RW2 1714 aa12.06□□□□□ -0.48
CDK2AP1-206ENST00000544658 A0A087WZG4 1122 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms