RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 HLFQ16534 295 aa18.17■□□□□ 0.5
VAMP1-208ENST00000544432 ARHGAP27Q6ZUM4 889 aa18.17■□□□□ 0.5
VAMP1-208ENST00000544432 C2CD5Q86YS7 1000 aa18.17■□□□□ 0.5
VAMP1-208ENST00000544432 MAP3K15Q6ZN16 1313 aa18.17■□□□□ 0.5
VAMP1-208ENST00000544432 HOXB7P09629 217 aa18.16■□□□□ 0.5
VAMP1-208ENST00000544432 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
VAMP1-208ENST00000544432 ST5P78524 1137 aa18.16■□□□□ 0.5
VAMP1-208ENST00000544432 PDIA6Q15084 440 aa18.16■□□□□ 0.5
VAMP1-208ENST00000544432 TPTE2Q6XPS3 522 aa18.16■□□□□ 0.5
VAMP1-208ENST00000544432 KIF6Q6ZMV9 814 aa18.16■□□□□ 0.5
VAMP1-208ENST00000544432 LRP10Q7Z4F1 713 aa18.16■□□□□ 0.5
VAMP1-208ENST00000544432 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
VAMP1-208ENST00000544432 TTLL6Q8N841 843 aa18.16■□□□□ 0.5
VAMP1-208ENST00000544432 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
VAMP1-208ENST00000544432 ARFGEF1Q9Y6D6 1849 aa18.15■□□□□ 0.5
VAMP1-208ENST00000544432 MYL6BP14649 208 aa18.15■□□□□ 0.5
VAMP1-208ENST00000544432 EIF2S2P20042 333 aaKnown RBP18.15■□□□□ 0.5
VAMP1-208ENST00000544432 TTLL7Q6ZT98 887 aa18.15■□□□□ 0.5
VAMP1-208ENST00000544432 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
VAMP1-208ENST00000544432 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
VAMP1-208ENST00000544432 NPHP1O15259 732 aa18.14■□□□□ 0.49
VAMP1-208ENST00000544432 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
VAMP1-208ENST00000544432 IFT57Q9NWB7 429 aa18.14■□□□□ 0.49
VAMP1-208ENST00000544432 KLRG2A4D1S0 409 aaPredicted RBP18.13■□□□□ 0.49
VAMP1-208ENST00000544432 GNAI1P63096 354 aa18.13■□□□□ 0.49
VAMP1-208ENST00000544432 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
VAMP1-208ENST00000544432 ATP10DQ9P241 1426 aa18.13■□□□□ 0.49
VAMP1-208ENST00000544432 CCDC27Q2M243 656 aa18.12■□□□□ 0.49
VAMP1-208ENST00000544432 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
VAMP1-208ENST00000544432 GIGYF2Q6Y7W6 1299 aaKnown RBP18.12■□□□□ 0.49
VAMP1-208ENST00000544432 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
VAMP1-208ENST00000544432 DDX21Q9NR30 783 aaKnown RBP eCLIP18.12■□□□□ 0.49
VAMP1-208ENST00000544432 MBIPQ9NS73 344 aa18.12■□□□□ 0.49
VAMP1-208ENST00000544432 SRGNP10124 158 aa18.11■□□□□ 0.49
VAMP1-208ENST00000544432 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
VAMP1-208ENST00000544432 ZNF34Q8IZ26 560 aa18.11■□□□□ 0.49
VAMP1-208ENST00000544432 CNKSR1Q969H4 720 aa18.11■□□□□ 0.49
VAMP1-208ENST00000544432 MASTLQ96GX5 879 aa18.11■□□□□ 0.49
VAMP1-208ENST00000544432 NYXQ9GZU5 481 aa18.11■□□□□ 0.49
VAMP1-208ENST00000544432 DLEC1Q9Y238 1755 aa18.11■□□□□ 0.49
VAMP1-208ENST00000544432 ANKRD31Q8N7Z5 1873 aa18.11■□□□□ 0.49
VAMP1-208ENST00000544432 IBTKQ9P2D0 1353 aaPredicted RBP18.1■□□□□ 0.49
VAMP1-208ENST00000544432 KRT24Q2M2I5 525 aa18.1■□□□□ 0.49
VAMP1-208ENST00000544432 ZNF622Q969S3 477 aaKnown RBP eCLIP18.1■□□□□ 0.49
VAMP1-208ENST00000544432 ZBTB3Q9H5J0 574 aa18.1■□□□□ 0.49
VAMP1-208ENST00000544432 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
VAMP1-208ENST00000544432 HDGFL1Q5TGJ6 251 aa18.08■□□□□ 0.48
VAMP1-208ENST00000544432 C9orf131Q5VYM1 1079 aa18.08■□□□□ 0.48
VAMP1-208ENST00000544432 COPS6Q7L5N1 327 aa18.08■□□□□ 0.48
VAMP1-208ENST00000544432 NECTIN2Q92692 538 aa18.08■□□□□ 0.48
VAMP1-208ENST00000544432 GPBP1L1Q9HC44 474 aaPredicted RBP18.08■□□□□ 0.48
VAMP1-208ENST00000544432 NUP98P52948 1817 aa18.07■□□□□ 0.48
VAMP1-208ENST00000544432 ANXA1P04083 346 aa18.07■□□□□ 0.48
VAMP1-208ENST00000544432 NPR1P16066 1061 aa18.07■□□□□ 0.48
VAMP1-208ENST00000544432 GTF2E1P29083 439 aaPredicted RBP18.07■□□□□ 0.48
VAMP1-208ENST00000544432 PARP10Q53GL7 1025 aa18.07■□□□□ 0.48
VAMP1-208ENST00000544432 XAGE3Q8WTP9 111 aa18.07■□□□□ 0.48
VAMP1-208ENST00000544432 DBF4Q9UBU7 674 aaPredicted RBP18.07■□□□□ 0.48
VAMP1-208ENST00000544432 UBN2Q6ZU65 1347 aa18.06■□□□□ 0.48
VAMP1-208ENST00000544432 FAM177BA6PVY3 158 aa18.06■□□□□ 0.48
VAMP1-208ENST00000544432 HSP90AB3PQ58FF7 597 aa18.06■□□□□ 0.48
VAMP1-208ENST00000544432 SUSD4Q5VX71 490 aa18.06■□□□□ 0.48
VAMP1-208ENST00000544432 WWC1Q8IX03 1113 aa18.06■□□□□ 0.48
VAMP1-208ENST00000544432 CHMP4AQ9BY43 222 aa18.06■□□□□ 0.48
VAMP1-208ENST00000544432 CHPF2Q9P2E5 772 aa18.06■□□□□ 0.48
VAMP1-208ENST00000544432 GPTP24298 496 aa18.05■□□□□ 0.48
VAMP1-208ENST00000544432 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
VAMP1-208ENST00000544432 PPP1R42Q7Z4L9 355 aa18.05■□□□□ 0.48
VAMP1-208ENST00000544432 HYPKQ9NX55 129 aa18.05■□□□□ 0.48
VAMP1-208ENST00000544432 RIC1Q4ADV7 1423 aa18.05■□□□□ 0.48
VAMP1-208ENST00000544432 IL16Q14005 1332 aa18.04■□□□□ 0.48
VAMP1-208ENST00000544432 ZC3H4Q9UPT8 1303 aaKnown RBP18.04■□□□□ 0.48
VAMP1-208ENST00000544432 NTSR2O95665 410 aa18.04■□□□□ 0.48
VAMP1-208ENST00000544432 LMNB1P20700 586 aa18.04■□□□□ 0.48
VAMP1-208ENST00000544432 C1QTNF8P60827 252 aa18.04■□□□□ 0.48
VAMP1-208ENST00000544432 AIMP1Q12904 312 aaKnown RBP18.04■□□□□ 0.48
VAMP1-208ENST00000544432 TCIRG1Q13488 830 aa18.04■□□□□ 0.48
VAMP1-208ENST00000544432 CRY2Q49AN0 593 aa18.04■□□□□ 0.48
VAMP1-208ENST00000544432 PRPF40BQ6NWY9 871 aaKnown RBP18.04■□□□□ 0.48
VAMP1-208ENST00000544432 C7orf43Q8WVR3 580 aa18.04■□□□□ 0.48
VAMP1-208ENST00000544432 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
VAMP1-208ENST00000544432 COL11A2P13942 1736 aaPredicted RBP18.03■□□□□ 0.48
VAMP1-208ENST00000544432 RNF123Q5XPI4 1314 aa18.03■□□□□ 0.48
VAMP1-208ENST00000544432 NFKBIEO00221 500 aa18.03■□□□□ 0.48
VAMP1-208ENST00000544432 C21orf2O43822 256 aa18.03■□□□□ 0.48
VAMP1-208ENST00000544432 ALDH1B1P30837 517 aa18.03■□□□□ 0.48
VAMP1-208ENST00000544432 ERFEQ4G0M1 354 aa18.03■□□□□ 0.48
VAMP1-208ENST00000544432 NUTM1Q86Y26 1132 aa18.03■□□□□ 0.48
VAMP1-208ENST00000544432 PLBD2Q8NHP8 589 aa18.03■□□□□ 0.48
VAMP1-208ENST00000544432 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
VAMP1-208ENST00000544432 RASSF7Q02833 373 aa18.02■□□□□ 0.48
VAMP1-208ENST00000544432 SLC10A5Q5PT55 438 aa18.02■□□□□ 0.48
VAMP1-208ENST00000544432 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.48
VAMP1-208ENST00000544432 C8orf58Q8NAV2 365 aa18.02■□□□□ 0.48
VAMP1-208ENST00000544432 ZNF526Q8TF50 670 aaPredicted RBP18.02■□□□□ 0.48
VAMP1-208ENST00000544432 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.48
VAMP1-208ENST00000544432 ABCC12Q96J65 1359 aa18.02■□□□□ 0.47
VAMP1-208ENST00000544432 HOXA10P31260 410 aaPredicted RBP18.01■□□□□ 0.47
VAMP1-208ENST00000544432 PRELPP51888 382 aa18■□□□□ 0.47
VAMP1-208ENST00000544432 NLRP10Q86W26 655 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms