RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.18□□□□□ -0.46
TCF4-209ENST00000544241 PPLO60437 1756 aa12.18□□□□□ -0.46
TCF4-209ENST00000544241 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
TCF4-209ENST00000544241 CASQ1P31415 396 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 KCNJ6P48051 423 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 CLCN6P51797 869 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 FAM69CQ0P6D2 419 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 CAMK4Q16566 473 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 VPS53Q5VIR6 699 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 UBXN4Q92575 508 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 IMPACTQ9P2X3 320 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 CTAGE5O15320 804 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 KRBA2Q6ZNG9 492 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 GOLGA5Q8TBA6 731 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 PHACTR3Q96KR7 559 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 SNX14Q9Y5W7 946 aa12.17□□□□□ -0.46
TCF4-209ENST00000544241 LMTK2Q8IWU2 1503 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 ARHGEF28Q8N1W1 1705 aaKnown RBP12.16□□□□□ -0.46
TCF4-209ENST00000544241 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
TCF4-209ENST00000544241 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 BECN2A8MW95 431 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 GTF2A1P52655 376 aaPredicted RBP12.16□□□□□ -0.46
TCF4-209ENST00000544241 ZSCAN26Q16670 478 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 RUFY3Q7L099 469 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 CKAP2LQ8IYA6 745 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
TCF4-209ENST00000544241 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 GNAI3P08754 354 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 ERCC6LQ2NKX8 1250 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 CCDC144BQ3MJ40 725 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 ARHGAP29Q52LW3 1261 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 TTC6Q86TZ1 520 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 CCDC144CPQ8IYA2 1237 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 ST7Q9NRC1 585 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 PSD3Q9NYI0 1048 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 ADGRL3Q9HAR2 1447 aa12.16□□□□□ -0.46
TCF4-209ENST00000544241 ATP7AQ04656 1500 aa12.15□□□□□ -0.46
TCF4-209ENST00000544241 MYO1CO00159 1063 aa12.15□□□□□ -0.46
TCF4-209ENST00000544241 ZRANB2O95218 330 aaKnown RBP eCLIP12.15□□□□□ -0.46
TCF4-209ENST00000544241 IVLP07476 585 aa12.15□□□□□ -0.46
TCF4-209ENST00000544241 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.46
TCF4-209ENST00000544241 SLC26A8Q96RN1 970 aa12.15□□□□□ -0.46
TCF4-209ENST00000544241 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
TCF4-209ENST00000544241 TTC21AQ8NDW8 1320 aa12.15□□□□□ -0.46
TCF4-209ENST00000544241 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
TCF4-209ENST00000544241 SGSM2O43147 1006 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 LIG1P18858 919 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 PLA2G4AP47712 749 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 ICE2Q659A1 982 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 CCDC83Q8IWF9 413 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 CCDC150Q8NCX0 1101 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 RUFY2Q8WXA3 655 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
TCF4-209ENST00000544241 DNAJC25Q9H1X3 360 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.14□□□□□ -0.47
TCF4-209ENST00000544241 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
TCF4-209ENST00000544241 HMOX1P09601 288 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
TCF4-209ENST00000544241 STX1AQ16623 288 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 SYT10Q6XYQ8 523 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 AFAP1Q8N556 730 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 CCDC191Q8NCU4 936 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 EXOC4Q96A65 974 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
TCF4-209ENST00000544241 USP27XA6NNY8 438 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 CASTP20810 708 aaKnown RBP12.13□□□□□ -0.47
TCF4-209ENST00000544241 CCZ1BP86790 482 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 CCZ1P86791 482 aaPredicted RBP12.13□□□□□ -0.47
TCF4-209ENST00000544241 CNTROBQ8N137 903 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 BICD2Q8TD16 824 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 TRMT1Q9NXH9 659 aaKnown RBP12.13□□□□□ -0.47
TCF4-209ENST00000544241 POLKQ9UBT6 870 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 CHMP3Q9Y3E7 222 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 AATKQ6ZMQ8 1374 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 EFCAB8A8MWE9 144 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 AXDND1Q5T1B0 1012 aaPredicted RBP12.13□□□□□ -0.47
TCF4-209ENST00000544241 NEK11Q8NG66 645 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 ZFP91Q96JP5 570 aaPredicted RBP12.13□□□□□ -0.47
TCF4-209ENST00000544241 DIP2BQ9P265 1576 aa12.13□□□□□ -0.47
TCF4-209ENST00000544241 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 A0A1B0GUL7 405 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 NPHP1O15259 732 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
TCF4-209ENST00000544241 ANKRD1Q15327 319 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 LEKR1Q6ZMV7 388 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 C10orf67Q8IYJ2 551 aa12.12□□□□□ -0.47
TCF4-209ENST00000544241 OSBPL5Q9H0X9 879 aaPredicted RBP12.12□□□□□ -0.47
TCF4-209ENST00000544241 ARHGEF10O15013 1369 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms