RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TMC1Q8TDI8 760 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 RBCK1Q9BYM8 510 aa6.14□□□□□ -1.43
SCFD1-207ENST00000544052 NDUFB5O43674 189 aa6.13□□□□□ -1.43
SCFD1-207ENST00000544052 TXLNAP40222 546 aa6.13□□□□□ -1.43
SCFD1-207ENST00000544052 HIRAP54198 1017 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-207ENST00000544052 NBPF15Q8N660 670 aa6.13□□□□□ -1.43
SCFD1-207ENST00000544052 INSM2Q96T92 566 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-207ENST00000544052 PHACTR1Q9C0D0 580 aa6.13□□□□□ -1.43
SCFD1-207ENST00000544052 NXF1Q9UBU9 619 aaKnown RBP6.13□□□□□ -1.43
SCFD1-207ENST00000544052 P4HBP07237 508 aaKnown RBP6.13□□□□□ -1.43
SCFD1-207ENST00000544052 BRD2P25440 801 aaKnown RBP6.13□□□□□ -1.43
SCFD1-207ENST00000544052 MEIOBQ8N635 442 aa6.13□□□□□ -1.43
SCFD1-207ENST00000544052 KLRG1Q96E93 195 aa6.13□□□□□ -1.43
SCFD1-207ENST00000544052 NIFKQ9BYG3 293 aaKnown RBP6.13□□□□□ -1.43
SCFD1-207ENST00000544052 RTN1Q16799 776 aa6.12□□□□□ -1.43
SCFD1-207ENST00000544052 ZNF326Q5BKZ1 582 aaKnown RBP6.12□□□□□ -1.43
SCFD1-207ENST00000544052 SLC27A3Q5K4L6 730 aa6.12□□□□□ -1.43
SCFD1-207ENST00000544052 NPAS3Q8IXF0 933 aa6.12□□□□□ -1.43
SCFD1-207ENST00000544052 RHBDD1Q8TEB9 315 aa6.12□□□□□ -1.43
SCFD1-207ENST00000544052 IGHA2P01877 340 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 C11orf91Q3C1V1 193 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 GRIP2Q9C0E4 1043 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 GPR182O15218 404 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 TREHO43280 583 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 CTSOP43234 321 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-207ENST00000544052 PHKA2P46019 1235 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 PLA2G4AP47712 749 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 DNM1Q05193 864 aaKnown RBP6.11□□□□□ -1.43
SCFD1-207ENST00000544052 C4orf17Q53FE4 359 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 EAPPQ56P03 285 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-207ENST00000544052 ALKBH2Q6NS38 261 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 AIDAQ96BJ3 306 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 IFT43Q96FT9 208 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 IGSF5Q9NSI5 407 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 POLIQ9UNA4 740 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 BCS1LQ9Y276 419 aa6.11□□□□□ -1.43
SCFD1-207ENST00000544052 ABTB2Q8N961 1025 aa6.1□□□□□ -1.43
SCFD1-207ENST00000544052 ZAP70P43403 619 aa6.1□□□□□ -1.43
SCFD1-207ENST00000544052 MAPK8P45983 427 aa6.1□□□□□ -1.43
SCFD1-207ENST00000544052 LINC00528Q8N1L1 170 aa6.1□□□□□ -1.43
SCFD1-207ENST00000544052 IRF7Q92985 503 aa6.1□□□□□ -1.43
SCFD1-207ENST00000544052 TSEN34Q9BSV6 310 aaKnown RBP6.1□□□□□ -1.43
SCFD1-207ENST00000544052 POLMQ9NP87 494 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-207ENST00000544052 SPINT1O43278 529 aa6.09□□□□□ -1.43
SCFD1-207ENST00000544052 RNF144AP50876 292 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-207ENST00000544052 EHHADHQ08426 723 aa6.09□□□□□ -1.43
SCFD1-207ENST00000544052 DSC3Q14574 896 aa6.09□□□□□ -1.43
SCFD1-207ENST00000544052 C7orf43Q8WVR3 580 aa6.09□□□□□ -1.43
SCFD1-207ENST00000544052 EDEM1Q92611 657 aa6.09□□□□□ -1.43
SCFD1-207ENST00000544052 ZFP42Q96MM3 310 aa6.09□□□□□ -1.43
SCFD1-207ENST00000544052 FAM129BQ96TA1 746 aa6.09□□□□□ -1.43
SCFD1-207ENST00000544052 RNF19AQ9NV58 838 aa6.09□□□□□ -1.43
SCFD1-207ENST00000544052 FAM181BA6NEQ2 426 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 GTF2E1P29083 439 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-207ENST00000544052 FMR1Q06787 632 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCFD1-207ENST00000544052 SCARF1Q14162 830 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 GNASQ5JWF2 1037 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 PRICKLE2Q7Z3G6 844 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 TREML1Q86YW5 311 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 CITED4Q96RK1 184 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 SETDB2Q96T68 719 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 WWC3Q9ULE0 1092 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 H3BM21 787 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 GPC1P35052 558 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 PLCB3Q01970 1234 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 POU4F2Q12837 409 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 COL19A1Q14993 1142 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 C6orf118Q5T5N4 469 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 MRPL14Q6P1L8 145 aaKnown RBP6.08□□□□□ -1.44
SCFD1-207ENST00000544052 ZNF280CQ8ND82 737 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 GPR152Q8TDT2 470 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 FAM161BQ96MY7 647 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 NIF3L1Q9GZT8 377 aa6.08□□□□□ -1.44
SCFD1-207ENST00000544052 A6NHS1 94 aa6.07□□□□□ -1.44
SCFD1-207ENST00000544052 PDGFAP04085 211 aa6.07□□□□□ -1.44
SCFD1-207ENST00000544052 GMPRP36959 345 aa6.07□□□□□ -1.44
SCFD1-207ENST00000544052 C1orf53Q5VUE5 145 aa6.07□□□□□ -1.44
SCFD1-207ENST00000544052 DMRTB1Q96MA1 342 aa6.07□□□□□ -1.44
SCFD1-207ENST00000544052 BMP2P12643 396 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 MZF1P28698 734 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-207ENST00000544052 GJD3Q8N144 294 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 RHPN1Q8TCX5 695 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 NUDT16Q96DE0 195 aaKnown RBP6.06□□□□□ -1.44
SCFD1-207ENST00000544052 HSH2DQ96JZ2 352 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 IGSF3O75054 1194 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 RECKO95980 971 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 VEGFBP49765 207 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 PDE3BQ13370 1112 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 RNF217Q8TC41 542 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 GGNBP2Q9H3C7 697 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 USP20Q9Y2K6 914 aa6.06□□□□□ -1.44
SCFD1-207ENST00000544052 MICAL2O94851 1124 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 UPP2O95045 317 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 LDHBP07195 334 aaKnown RBP6.05□□□□□ -1.44
SCFD1-207ENST00000544052 TSNAXIP1Q2TAA8 658 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 NBPF1Q3BBV0 1214 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 C8orf34Q49A92 452 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 SUSD3Q96L08 255 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 SPATA31C2B4DYI2 1134 aa6.05□□□□□ -1.44
SCFD1-207ENST00000544052 OPLAHO14841 1288 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms