RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 TTLL6Q8N841 843 aa13.38□□□□□ -0.27
NPIPB4-217ENST00000543449 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
NPIPB4-217ENST00000543449 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
NPIPB4-217ENST00000543449 NIP7Q9Y221 180 aaKnown RBP eCLIP13.38□□□□□ -0.27
NPIPB4-217ENST00000543449 LAS1LQ9Y4W2 734 aaKnown RBP13.38□□□□□ -0.27
NPIPB4-217ENST00000543449 MAP3K15Q6ZN16 1313 aa13.38□□□□□ -0.27
NPIPB4-217ENST00000543449 KIAA1551Q9HCM1 1747 aa13.37□□□□□ -0.27
NPIPB4-217ENST00000543449 PIP4K2AP48426 406 aaPredicted RBP13.37□□□□□ -0.27
NPIPB4-217ENST00000543449 ARHGAP27Q6ZUM4 889 aa13.37□□□□□ -0.27
NPIPB4-217ENST00000543449 IFT57Q9NWB7 429 aa13.37□□□□□ -0.27
NPIPB4-217ENST00000543449 BCORQ6W2J9 1755 aa13.37□□□□□ -0.27
NPIPB4-217ENST00000543449 N4BP2Q86UW6 1770 aaPredicted RBP13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 EIF2S2P20042 333 aaKnown RBP13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 CHRNA5P30532 468 aa13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 CCDC27Q2M243 656 aa13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 HSP90AB3PQ58FF7 597 aa13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 SOGA3Q5TF21 947 aa13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 CNKSR1Q969H4 720 aa13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 WWC3Q9ULE0 1092 aa13.36□□□□□ -0.27
NPIPB4-217ENST00000543449 IBTKQ9P2D0 1353 aaPredicted RBP13.35□□□□□ -0.27
NPIPB4-217ENST00000543449 AFDNP55196 1824 aaKnown RBP13.35□□□□□ -0.27
NPIPB4-217ENST00000543449 MYL6BP14649 208 aa13.35□□□□□ -0.27
NPIPB4-217ENST00000543449 PARP10Q53GL7 1025 aa13.35□□□□□ -0.27
NPIPB4-217ENST00000543449 STYK1Q6J9G0 422 aa13.35□□□□□ -0.27
NPIPB4-217ENST00000543449 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
NPIPB4-217ENST00000543449 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
NPIPB4-217ENST00000543449 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
NPIPB4-217ENST00000543449 GIGYF2Q6Y7W6 1299 aaKnown RBP13.34□□□□□ -0.27
NPIPB4-217ENST00000543449 PPP1R42Q7Z4L9 355 aa13.34□□□□□ -0.27
NPIPB4-217ENST00000543449 MASTLQ96GX5 879 aa13.34□□□□□ -0.27
NPIPB4-217ENST00000543449 RNF123Q5XPI4 1314 aa13.34□□□□□ -0.27
NPIPB4-217ENST00000543449 ARFGEF1Q9Y6D6 1849 aa13.34□□□□□ -0.27
NPIPB4-217ENST00000543449 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.27
NPIPB4-217ENST00000543449 ADCY9O60503 1353 aa13.33□□□□□ -0.27
NPIPB4-217ENST00000543449 ZNF853P0CG23 659 aa13.33□□□□□ -0.28
NPIPB4-217ENST00000543449 HDGFL1Q5TGJ6 251 aa13.33□□□□□ -0.28
NPIPB4-217ENST00000543449 ZNF622Q969S3 477 aaKnown RBP eCLIP13.33□□□□□ -0.28
NPIPB4-217ENST00000543449 GPBP1L1Q9HC44 474 aaPredicted RBP13.33□□□□□ -0.28
NPIPB4-217ENST00000543449 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.28
NPIPB4-217ENST00000543449 ZC3H4Q9UPT8 1303 aaKnown RBP13.33□□□□□ -0.28
NPIPB4-217ENST00000543449 SRGNP10124 158 aa13.32□□□□□ -0.28
NPIPB4-217ENST00000543449 NPR1P16066 1061 aa13.32□□□□□ -0.28
NPIPB4-217ENST00000543449 PDIA6Q15084 440 aa13.32□□□□□ -0.28
NPIPB4-217ENST00000543449 HLFQ16534 295 aa13.32□□□□□ -0.28
NPIPB4-217ENST00000543449 MBIPQ9NS73 344 aa13.32□□□□□ -0.28
NPIPB4-217ENST00000543449 HYPKQ9NX55 129 aa13.32□□□□□ -0.28
NPIPB4-217ENST00000543449 DLEC1Q9Y238 1755 aa13.31□□□□□ -0.28
NPIPB4-217ENST00000543449 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
NPIPB4-217ENST00000543449 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
NPIPB4-217ENST00000543449 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
NPIPB4-217ENST00000543449 TTLL7Q6ZT98 887 aa13.31□□□□□ -0.28
NPIPB4-217ENST00000543449 ZBTB3Q9H5J0 574 aa13.31□□□□□ -0.28
NPIPB4-217ENST00000543449 IL16Q14005 1332 aa13.31□□□□□ -0.28
NPIPB4-217ENST00000543449 RIC1Q4ADV7 1423 aa13.3□□□□□ -0.28
NPIPB4-217ENST00000543449 COPS6Q7L5N1 327 aa13.3□□□□□ -0.28
NPIPB4-217ENST00000543449 ZNF34Q8IZ26 560 aa13.3□□□□□ -0.28
NPIPB4-217ENST00000543449 LMNB1P20700 586 aa13.29□□□□□ -0.28
NPIPB4-217ENST00000543449 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
NPIPB4-217ENST00000543449 C9orf131Q5VYM1 1079 aa13.29□□□□□ -0.28
NPIPB4-217ENST00000543449 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
NPIPB4-217ENST00000543449 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
NPIPB4-217ENST00000543449 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 GRIPAP1Q4V328 841 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 CCDC30Q5VVM6 783 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 WWC1Q8IX03 1113 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 UTP14AQ9BVJ6 771 aaKnown RBP13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 RNF181Q9P0P0 153 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 KDM2BQ8NHM5 1336 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 LTBP3Q9NS15 1303 aa13.28□□□□□ -0.28
NPIPB4-217ENST00000543449 HSP90B1P14625 803 aaKnown RBP13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 GPTP24298 496 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 GOLGA2Q08379 1002 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 AIMP1Q12904 312 aaKnown RBP13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 TCIRG1Q13488 830 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 PROSER3Q2NL68 480 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 SUSD4Q5VX71 490 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 CC2D2BQ6DHV5 1058 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 PRPF40BQ6NWY9 871 aaKnown RBP13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 CCDC24Q8N4L8 307 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 NECTIN2Q92692 538 aa13.27□□□□□ -0.29
NPIPB4-217ENST00000543449 C21orf2O43822 256 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 NTSR2O95665 410 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 DDX58O95786 925 aaKnown RBP13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 NUP98P52948 1817 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 KRT24Q2M2I5 525 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 CCDC93Q567U6 631 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 UBN2Q6ZU65 1347 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 RTKN2Q8IZC4 609 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 ANKRD31Q8N7Z5 1873 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 RBM17Q96I25 401 aaKnown RBP13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
NPIPB4-217ENST00000543449 TMX4Q9H1E5 349 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms