RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 LTN1O94822 1766 aa6.78□□□□□ -1.32
ZEB1-209ENST00000542879 NCAPD2Q15021 1401 aa6.78□□□□□ -1.32
ZEB1-209ENST00000542879 LRP6O75581 1613 aa6.78□□□□□ -1.32
ZEB1-209ENST00000542879 SGSM2O43147 1006 aa6.77□□□□□ -1.32
ZEB1-209ENST00000542879 ZSCAN22P10073 491 aaPredicted RBP6.77□□□□□ -1.32
ZEB1-209ENST00000542879 HMGN5P82970 282 aaKnown RBP6.77□□□□□ -1.32
ZEB1-209ENST00000542879 RILPL2Q969X0 211 aa6.77□□□□□ -1.32
ZEB1-209ENST00000542879 PRIMPOLQ96LW4 560 aa6.77□□□□□ -1.32
ZEB1-209ENST00000542879 USP44Q9H0E7 712 aa6.77□□□□□ -1.32
ZEB1-209ENST00000542879 NAP1L2Q9ULW6 460 aaPredicted RBP6.77□□□□□ -1.32
ZEB1-209ENST00000542879 SNX14Q9Y5W7 946 aa6.77□□□□□ -1.32
ZEB1-209ENST00000542879 LRRFIP2Q9Y608 721 aaKnown RBP6.77□□□□□ -1.32
ZEB1-209ENST00000542879 RREB1Q92766 1687 aa6.77□□□□□ -1.33
ZEB1-209ENST00000542879 USP42Q9H9J4 1324 aaKnown RBP6.77□□□□□ -1.33
ZEB1-209ENST00000542879 PSEN1P49768 467 aa6.77□□□□□ -1.33
ZEB1-209ENST00000542879 CNPY2Q9Y2B0 182 aa6.77□□□□□ -1.33
ZEB1-209ENST00000542879 PAPPAQ13219 1627 aa6.77□□□□□ -1.33
ZEB1-209ENST00000542879 TRIM6-TRIM34B2RNG4 842 aa6.77□□□□□ -1.33
ZEB1-209ENST00000542879 LETM1O95202 739 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-209ENST00000542879 UBE2HP62256 183 aa6.77□□□□□ -1.33
ZEB1-209ENST00000542879 FKBP5Q13451 457 aaPredicted RBP6.77□□□□□ -1.33
ZEB1-209ENST00000542879 NOL8Q76FK4 1167 aaKnown RBP6.77□□□□□ -1.33
ZEB1-209ENST00000542879 RUFY3Q7L099 469 aa6.77□□□□□ -1.33
ZEB1-209ENST00000542879 AP5Z1O43299 807 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 ADCY5O95622 1261 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 NOLC1Q14978 699 aaKnown RBP eCLIP6.76□□□□□ -1.33
ZEB1-209ENST00000542879 CCDC30Q5VVM6 783 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 PLCD3Q8N3E9 789 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 FAM53CQ9NYF3 392 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 USP25Q9UHP3 1055 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 MAP3K5Q99683 1374 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 RASEFQ8IZ41 740 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 KCNB2Q92953 911 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 CCDC94Q9BW85 323 aaPredicted RBP6.76□□□□□ -1.33
ZEB1-209ENST00000542879 TTC21AQ8NDW8 1320 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 RGPD2P0DJD1 1756 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 RAB11FIP3O75154 756 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 KDM4AO75164 1064 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 F13A1P00488 732 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 SYT1P21579 422 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 AK2P54819 239 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 EYA1Q99502 592 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 STK31Q9BXU1 1019 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 BABAM1Q9NWV8 329 aa6.76□□□□□ -1.33
ZEB1-209ENST00000542879 SIPA1L3O60292 1781 aaPredicted RBP6.76□□□□□ -1.33
ZEB1-209ENST00000542879 STX6O43752 255 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 PTMAP06454 111 aaKnown RBP6.75□□□□□ -1.33
ZEB1-209ENST00000542879 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-209ENST00000542879 RTF1Q92541 710 aaKnown RBP6.75□□□□□ -1.33
ZEB1-209ENST00000542879 JARID2Q92833 1246 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-209ENST00000542879 LARGE1O95461 756 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 ST3GAL1Q11201 340 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 KCNF1Q9H3M0 494 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 PRDM10Q9NQV6 1147 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 LIMCH1Q9UPQ0 1083 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 TULP2O00295 520 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 FOXD4L6Q3SYB3 417 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-209ENST00000542879 FOXD4L3Q6VB84 417 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-209ENST00000542879 NUTM1Q86Y26 1132 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 TTC12Q9H892 705 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-209ENST00000542879 HYPKQ9NX55 129 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 LAMA4Q16363 1823 aa6.75□□□□□ -1.33
ZEB1-209ENST00000542879 KIAA1524Q8TCG1 905 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 RHPN1Q8TCX5 695 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 IL1RAPL2Q9NP60 686 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 MTMR6Q9Y217 621 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 C17orf53Q8N3J3 647 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-209ENST00000542879 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-209ENST00000542879 GNAT3A8MTJ3 354 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 VGLL3A8MV65 326 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 SOX12O15370 315 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 UBTFL1P0CB47 393 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-209ENST00000542879 PPP1R42Q7Z4L9 355 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 IL17REQ8NFR9 667 aa6.74□□□□□ -1.33
ZEB1-209ENST00000542879 CEMIPQ8WUJ3 1361 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 TSGA10IPQ3SY00 556 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 TM6SF1Q9BZW5 370 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 MAP4K4O95819 1239 aaPredicted RBP6.73□□□□□ -1.33
ZEB1-209ENST00000542879 VPS53Q5VIR6 699 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 NFATC2IPQ8NCF5 419 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 TSC1Q92574 1164 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 KIF1BPQ96EK5 621 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 ZSWIM6Q9HCJ5 1215 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 TTC41PQ6P2S7 1318 aa6.73□□□□□ -1.33
ZEB1-209ENST00000542879 GIMAP6Q6P9H5 292 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 CNTROBQ8N137 903 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 MPNDQ8N594 471 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 PHAXQ9H814 394 aaKnown RBP6.72□□□□□ -1.33
ZEB1-209ENST00000542879 KCNG1Q9UIX4 513 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 PYCARDQ9ULZ3 195 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 CCDC171Q6TFL3 1326 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 CTIFO43310 598 aaKnown RBP6.72□□□□□ -1.33
ZEB1-209ENST00000542879 GJB2P29033 226 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 DNM1Q05193 864 aaKnown RBP6.72□□□□□ -1.33
ZEB1-209ENST00000542879 TAF7Q15545 349 aaPredicted RBP6.72□□□□□ -1.33
ZEB1-209ENST00000542879 ANKRD7Q92527 254 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 SMC3Q9UQE7 1217 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 TBX22Q9Y458 520 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 ATP6V1DQ9Y5K8 247 aa6.72□□□□□ -1.33
ZEB1-209ENST00000542879 NFAT5O94916 1531 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms