RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 RUNDC1Q96C34 613 aa26.55■■□□□ 1.84
DDB1-220ENST00000542337 ZEB1P37275 1124 aaPredicted RBP26.54■■□□□ 1.84
DDB1-220ENST00000542337 NEUROD2Q15784 382 aa26.54■■□□□ 1.84
DDB1-220ENST00000542337 KIF6Q6ZMV9 814 aa26.54■■□□□ 1.84
DDB1-220ENST00000542337 CNKSR1Q969H4 720 aa26.54■■□□□ 1.84
DDB1-220ENST00000542337 DLG5Q8TDM6 1919 aa26.53■■□□□ 1.84
DDB1-220ENST00000542337 PRKRIP1Q9H875 184 aaPredicted RBP26.53■■□□□ 1.84
DDB1-220ENST00000542337 ERVV-1B6SEH8 477 aa26.52■■□□□ 1.84
DDB1-220ENST00000542337 KIF3CO14782 793 aa26.52■■□□□ 1.84
DDB1-220ENST00000542337 MYL6BP14649 208 aa26.52■■□□□ 1.84
DDB1-220ENST00000542337 LMNB1P20700 586 aa26.52■■□□□ 1.84
DDB1-220ENST00000542337 GTF2E1P29083 439 aaPredicted RBP26.52■■□□□ 1.84
DDB1-220ENST00000542337 STYK1Q6J9G0 422 aa26.52■■□□□ 1.84
DDB1-220ENST00000542337 KDM2BQ8NHM5 1336 aa26.52■■□□□ 1.84
DDB1-220ENST00000542337 MASTLQ96GX5 879 aa26.51■■□□□ 1.83
DDB1-220ENST00000542337 ERBB4Q15303 1308 aa26.5■■□□□ 1.83
DDB1-220ENST00000542337 RASSF7Q02833 373 aa26.5■■□□□ 1.83
DDB1-220ENST00000542337 HLFQ16534 295 aa26.5■■□□□ 1.83
DDB1-220ENST00000542337 ADAMTS8Q9UP79 889 aa26.5■■□□□ 1.83
DDB1-220ENST00000542337 FAM177BA6PVY3 158 aa26.49■■□□□ 1.83
DDB1-220ENST00000542337 C21orf2O43822 256 aa26.49■■□□□ 1.83
DDB1-220ENST00000542337 SRGNP10124 158 aa26.49■■□□□ 1.83
DDB1-220ENST00000542337 ZNF219Q9P2Y4 722 aaPredicted RBP26.49■■□□□ 1.83
DDB1-220ENST00000542337 KDM3BQ7LBC6 1761 aa26.48■■□□□ 1.83
DDB1-220ENST00000542337 MAP3K15Q6ZN16 1313 aa26.48■■□□□ 1.83
DDB1-220ENST00000542337 ZC3H4Q9UPT8 1303 aaKnown RBP26.48■■□□□ 1.83
DDB1-220ENST00000542337 EIF2S2P20042 333 aaKnown RBP26.48■■□□□ 1.83
DDB1-220ENST00000542337 SOGA3Q5TF21 947 aa26.48■■□□□ 1.83
DDB1-220ENST00000542337 C16orf71Q8IYS4 520 aaPredicted RBP26.48■■□□□ 1.83
DDB1-220ENST00000542337 NYXQ9GZU5 481 aa26.48■■□□□ 1.83
DDB1-220ENST00000542337 BCORQ6W2J9 1755 aa26.48■■□□□ 1.83
DDB1-220ENST00000542337 TOMM70O94826 608 aa26.47■■□□□ 1.83
DDB1-220ENST00000542337 NMRK2Q9NPI5 230 aa26.47■■□□□ 1.83
DDB1-220ENST00000542337 NPR1P16066 1061 aa26.45■■□□□ 1.82
DDB1-220ENST00000542337 TTLL7Q6ZT98 887 aa26.45■■□□□ 1.82
DDB1-220ENST00000542337 LAS1LQ9Y4W2 734 aaKnown RBP26.45■■□□□ 1.82
DDB1-220ENST00000542337 LAMB4A4D0S4 1761 aa26.45■■□□□ 1.82
DDB1-220ENST00000542337 DLEC1Q9Y238 1755 aa26.45■■□□□ 1.82
DDB1-220ENST00000542337 PRPF40BQ6NWY9 871 aaKnown RBP26.44■■□□□ 1.82
DDB1-220ENST00000542337 NFKBIEO00221 500 aa26.43■■□□□ 1.82
DDB1-220ENST00000542337 HSPA6P17066 643 aa26.43■■□□□ 1.82
DDB1-220ENST00000542337 ZBTB3Q9H5J0 574 aa26.43■■□□□ 1.82
DDB1-220ENST00000542337 CHL1O00533 1208 aa26.42■■□□□ 1.82
DDB1-220ENST00000542337 TRIM35Q9UPQ4 493 aa26.42■■□□□ 1.82
DDB1-220ENST00000542337 ANKRD31Q8N7Z5 1873 aa26.42■■□□□ 1.82
DDB1-220ENST00000542337 KLRG2A4D1S0 409 aaPredicted RBP26.41■■□□□ 1.82
DDB1-220ENST00000542337 TAOK3Q9H2K8 898 aa26.41■■□□□ 1.82
DDB1-220ENST00000542337 RRAGCQ9HB90 399 aa26.41■■□□□ 1.82
DDB1-220ENST00000542337 ALDH1B1P30837 517 aa26.4■■□□□ 1.82
DDB1-220ENST00000542337 GPTP24298 496 aa26.39■■□□□ 1.82
DDB1-220ENST00000542337 DPY19L2Q6NUT2 758 aa26.39■■□□□ 1.82
DDB1-220ENST00000542337 GIGYF2Q6Y7W6 1299 aaKnown RBP26.39■■□□□ 1.82
DDB1-220ENST00000542337 GLTPD2A6NH11 291 aa26.38■■□□□ 1.81
DDB1-220ENST00000542337 ERFEQ4G0M1 354 aa26.38■■□□□ 1.81
DDB1-220ENST00000542337 RBM46Q8TBY0 533 aaKnown RBP26.38■■□□□ 1.81
DDB1-220ENST00000542337 NECTIN2Q92692 538 aa26.38■■□□□ 1.81
DDB1-220ENST00000542337 LTBP3Q9NS15 1303 aa26.38■■□□□ 1.81
DDB1-220ENST00000542337 PRELPP51888 382 aa26.37■■□□□ 1.81
DDB1-220ENST00000542337 PDIA6Q15084 440 aa26.37■■□□□ 1.81
DDB1-220ENST00000542337 CCDC93Q567U6 631 aa26.37■■□□□ 1.81
DDB1-220ENST00000542337 PPP1R42Q7Z4L9 355 aa26.37■■□□□ 1.81
DDB1-220ENST00000542337 NUTM1Q86Y26 1132 aa26.37■■□□□ 1.81
DDB1-220ENST00000542337 CALD1Q05682 793 aaKnown RBP26.36■■□□□ 1.81
DDB1-220ENST00000542337 PARP10Q53GL7 1025 aa26.36■■□□□ 1.81
DDB1-220ENST00000542337 ZNF34Q8IZ26 560 aa26.36■■□□□ 1.81
DDB1-220ENST00000542337 SUSD4Q5VX71 490 aa26.35■■□□□ 1.81
DDB1-220ENST00000542337 CFAP44Q96MT7 982 aa26.35■■□□□ 1.81
DDB1-220ENST00000542337 IBTKQ9P2D0 1353 aaPredicted RBP26.34■■□□□ 1.81
DDB1-220ENST00000542337 SBF1O95248 1867 aa26.34■■□□□ 1.81
DDB1-220ENST00000542337 COL11A2P13942 1736 aaPredicted RBP26.34■■□□□ 1.81
DDB1-220ENST00000542337 ANXA1P04083 346 aa26.34■■□□□ 1.81
DDB1-220ENST00000542337 VEGFAP15692 232 aaPredicted RBP26.34■■□□□ 1.81
DDB1-220ENST00000542337 PROSER3Q2NL68 480 aa26.34■■□□□ 1.81
DDB1-220ENST00000542337 HSP90AB3PQ58FF7 597 aa26.34■■□□□ 1.81
DDB1-220ENST00000542337 COPS6Q7L5N1 327 aa26.34■■□□□ 1.81
DDB1-220ENST00000542337 RPGRQ92834 1020 aaKnown RBP26.34■■□□□ 1.81
DDB1-220ENST00000542337 DDX21Q9NR30 783 aaKnown RBP eCLIP26.34■■□□□ 1.81
DDB1-220ENST00000542337 APAF1O14727 1248 aa26.33■■□□□ 1.81
DDB1-220ENST00000542337 HOXB7P09629 217 aa26.33■■□□□ 1.81
DDB1-220ENST00000542337 FSTL1Q12841 308 aa26.33■■□□□ 1.81
DDB1-220ENST00000542337 AIMP1Q12904 312 aaKnown RBP26.33■■□□□ 1.81
DDB1-220ENST00000542337 LRP10Q7Z4F1 713 aa26.33■■□□□ 1.81
DDB1-220ENST00000542337 RTKN2Q8IZC4 609 aa26.33■■□□□ 1.81
DDB1-220ENST00000542337 C7orf43Q8WVR3 580 aa26.33■■□□□ 1.81
DDB1-220ENST00000542337 UBN2Q6ZU65 1347 aa26.33■■□□□ 1.81
DDB1-220ENST00000542337 APLP1P51693 650 aa26.32■■□□□ 1.8
DDB1-220ENST00000542337 HDGFL1Q5TGJ6 251 aa26.32■■□□□ 1.8
DDB1-220ENST00000542337 XAGE3Q8WTP9 111 aa26.32■■□□□ 1.8
DDB1-220ENST00000542337 CRY2Q49AN0 593 aa26.31■■□□□ 1.8
DDB1-220ENST00000542337 UTP14AQ9BVJ6 771 aaKnown RBP26.31■■□□□ 1.8
DDB1-220ENST00000542337 KRT24Q2M2I5 525 aa26.3■■□□□ 1.8
DDB1-220ENST00000542337 SLX4Q8IY92 1834 aa26.3■■□□□ 1.8
DDB1-220ENST00000542337 NTSR2O95665 410 aa26.29■■□□□ 1.8
DDB1-220ENST00000542337 FKBP4Q02790 459 aaKnown RBP eCLIP26.29■■□□□ 1.8
DDB1-220ENST00000542337 RBM17Q96I25 401 aaKnown RBP26.29■■□□□ 1.8
DDB1-220ENST00000542337 NLRP3Q96P20 1036 aa26.29■■□□□ 1.8
DDB1-220ENST00000542337 ABCC12Q96J65 1359 aa26.29■■□□□ 1.8
DDB1-220ENST00000542337 GNAI1P63096 354 aa26.28■■□□□ 1.8
DDB1-220ENST00000542337 CC2D2BQ6DHV5 1058 aa26.28■■□□□ 1.8
DDB1-220ENST00000542337 SMC1BQ8NDV3 1235 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms