RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 SRGNP10124 158 aa14.97□□□□□ -0.01
VTN-203ENST00000542029 RBM46Q8TBY0 533 aaKnown RBP14.97□□□□□ -0.01
VTN-203ENST00000542029 THUMPD2Q9BTF0 503 aaKnown RBP14.97□□□□□ -0.01
VTN-203ENST00000542029 TSPYL4Q9UJ04 414 aa14.97□□□□□ -0.01
VTN-203ENST00000542029 NRXN2Q9P2S2 1712 aa14.97□□□□□ -0.01
VTN-203ENST00000542029 KLRG2A4D1S0 409 aaPredicted RBP14.96□□□□□ -0.01
VTN-203ENST00000542029 TMPOP42166 694 aaKnown RBP14.96□□□□□ -0.01
VTN-203ENST00000542029 RASSF7Q02833 373 aa14.96□□□□□ -0.01
VTN-203ENST00000542029 WDR43Q15061 677 aaKnown RBP eCLIP14.96□□□□□ -0.01
VTN-203ENST00000542029 KIF6Q6ZMV9 814 aa14.96□□□□□ -0.01
VTN-203ENST00000542029 CCDC24Q8N4L8 307 aa14.96□□□□□ -0.01
VTN-203ENST00000542029 C21orf2O43822 256 aa14.95□□□□□ -0.02
VTN-203ENST00000542029 NPR1P16066 1061 aa14.95□□□□□ -0.02
VTN-203ENST00000542029 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
VTN-203ENST00000542029 DPY19L2Q6NUT2 758 aa14.95□□□□□ -0.02
VTN-203ENST00000542029 NYXQ9GZU5 481 aa14.95□□□□□ -0.02
VTN-203ENST00000542029 RRP7AQ9Y3A4 280 aaKnown RBP14.95□□□□□ -0.02
VTN-203ENST00000542029 MAP3K15Q6ZN16 1313 aa14.94□□□□□ -0.02
VTN-203ENST00000542029 LTBP3Q9NS15 1303 aa14.94□□□□□ -0.02
VTN-203ENST00000542029 GLTPD2A6NH11 291 aa14.94□□□□□ -0.02
VTN-203ENST00000542029 NFKBIEO00221 500 aa14.94□□□□□ -0.02
VTN-203ENST00000542029 APLP1P51693 650 aa14.94□□□□□ -0.02
VTN-203ENST00000542029 FSTL1Q12841 308 aa14.94□□□□□ -0.02
VTN-203ENST00000542029 PRPF40BQ6NWY9 871 aaKnown RBP14.94□□□□□ -0.02
VTN-203ENST00000542029 TAOK3Q9H2K8 898 aa14.94□□□□□ -0.02
VTN-203ENST00000542029 BRCA1P38398 1863 aaKnown RBP14.94□□□□□ -0.02
VTN-203ENST00000542029 VIRMAQ69YN4 1812 aaKnown RBP14.94□□□□□ -0.02
VTN-203ENST00000542029 ARFGEF1Q9Y6D6 1849 aa14.94□□□□□ -0.02
VTN-203ENST00000542029 ALDH1B1P30837 517 aa14.93□□□□□ -0.02
VTN-203ENST00000542029 HLFQ16534 295 aa14.93□□□□□ -0.02
VTN-203ENST00000542029 NGEFQ8N5V2 710 aa14.93□□□□□ -0.02
VTN-203ENST00000542029 RUNDC1Q96C34 613 aa14.93□□□□□ -0.02
VTN-203ENST00000542029 SCN7AQ01118 1682 aa14.93□□□□□ -0.02
VTN-203ENST00000542029 VEGFAP15692 232 aaPredicted RBP14.92□□□□□ -0.02
VTN-203ENST00000542029 ERFEQ4G0M1 354 aa14.92□□□□□ -0.02
VTN-203ENST00000542029 RRAGCQ9HB90 399 aa14.92□□□□□ -0.02
VTN-203ENST00000542029 MYL6BP14649 208 aa14.91□□□□□ -0.02
VTN-203ENST00000542029 CCDC93Q567U6 631 aa14.91□□□□□ -0.02
VTN-203ENST00000542029 PRKRIP1Q9H875 184 aaPredicted RBP14.91□□□□□ -0.02
VTN-203ENST00000542029 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
VTN-203ENST00000542029 AFDNP55196 1824 aaKnown RBP14.9□□□□□ -0.02
VTN-203ENST00000542029 IBTKQ9P2D0 1353 aaPredicted RBP14.9□□□□□ -0.02
VTN-203ENST00000542029 FAM177BA6PVY3 158 aa14.9□□□□□ -0.02
VTN-203ENST00000542029 EIF2S2P20042 333 aaKnown RBP14.9□□□□□ -0.02
VTN-203ENST00000542029 PRELPP51888 382 aa14.9□□□□□ -0.02
VTN-203ENST00000542029 PARP10Q53GL7 1025 aa14.9□□□□□ -0.02
VTN-203ENST00000542029 TTLL7Q6ZT98 887 aa14.9□□□□□ -0.02
VTN-203ENST00000542029 RTKN2Q8IZC4 609 aa14.9□□□□□ -0.02
VTN-203ENST00000542029 SMC1BQ8NDV3 1235 aa14.9□□□□□ -0.02
VTN-203ENST00000542029 CHL1O00533 1208 aa14.89□□□□□ -0.03
VTN-203ENST00000542029 NEUROD2Q15784 382 aa14.89□□□□□ -0.03
VTN-203ENST00000542029 GIGYF2Q6Y7W6 1299 aaKnown RBP14.89□□□□□ -0.03
VTN-203ENST00000542029 CCDC146Q8IYE0 955 aa14.89□□□□□ -0.03
VTN-203ENST00000542029 C7orf43Q8WVR3 580 aa14.89□□□□□ -0.03
VTN-203ENST00000542029 ADAMTS8Q9UP79 889 aa14.89□□□□□ -0.03
VTN-203ENST00000542029 CRY2Q49AN0 593 aa14.88□□□□□ -0.03
VTN-203ENST00000542029 GRIPAP1Q4V328 841 aa14.88□□□□□ -0.03
VTN-203ENST00000542029 HSP90AB3PQ58FF7 597 aa14.88□□□□□ -0.03
VTN-203ENST00000542029 CC2D2BQ6DHV5 1058 aa14.88□□□□□ -0.03
VTN-203ENST00000542029 PPP1R42Q7Z4L9 355 aa14.88□□□□□ -0.03
VTN-203ENST00000542029 ZNF34Q8IZ26 560 aa14.88□□□□□ -0.03
VTN-203ENST00000542029 ZBTB3Q9H5J0 574 aa14.88□□□□□ -0.03
VTN-203ENST00000542029 HOXB7P09629 217 aa14.87□□□□□ -0.03
VTN-203ENST00000542029 GPTP24298 496 aa14.86□□□□□ -0.03
VTN-203ENST00000542029 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
VTN-203ENST00000542029 FKBP4Q02790 459 aaKnown RBP eCLIP14.86□□□□□ -0.03
VTN-203ENST00000542029 CALD1Q05682 793 aaKnown RBP14.86□□□□□ -0.03
VTN-203ENST00000542029 PDIA6Q15084 440 aa14.86□□□□□ -0.03
VTN-203ENST00000542029 LRP10Q7Z4F1 713 aa14.86□□□□□ -0.03
VTN-203ENST00000542029 NUTM1Q86Y26 1132 aa14.86□□□□□ -0.03
VTN-203ENST00000542029 RPGRQ92834 1020 aaKnown RBP14.86□□□□□ -0.03
VTN-203ENST00000542029 TRIM35Q9UPQ4 493 aa14.86□□□□□ -0.03
VTN-203ENST00000542029 RNF123Q5XPI4 1314 aa14.86□□□□□ -0.03
VTN-203ENST00000542029 CEP350Q5VT06 3117 aa14.85□□□□□ -0.03
VTN-203ENST00000542029 HOXA10P31260 410 aaPredicted RBP14.85□□□□□ -0.03
VTN-203ENST00000542029 SUSD4Q5VX71 490 aa14.85□□□□□ -0.03
VTN-203ENST00000542029 CFAP44Q96MT7 982 aa14.85□□□□□ -0.03
VTN-203ENST00000542029 UTP14AQ9BVJ6 771 aaKnown RBP14.85□□□□□ -0.03
VTN-203ENST00000542029 DDX21Q9NR30 783 aaKnown RBP eCLIP14.85□□□□□ -0.03
VTN-203ENST00000542029 RIC1Q4ADV7 1423 aa14.84□□□□□ -0.03
VTN-203ENST00000542029 BCORQ6W2J9 1755 aa14.84□□□□□ -0.03
VTN-203ENST00000542029 DLEC1Q9Y238 1755 aa14.84□□□□□ -0.03
VTN-203ENST00000542029 COPS6Q7L5N1 327 aa14.84□□□□□ -0.03
VTN-203ENST00000542029 RBM17Q96I25 401 aaKnown RBP14.84□□□□□ -0.03
VTN-203ENST00000542029 NLRP3Q96P20 1036 aa14.84□□□□□ -0.03
VTN-203ENST00000542029 CRAMP1Q96RY5 1269 aa14.84□□□□□ -0.03
VTN-203ENST00000542029 LAS1LQ9Y4W2 734 aaKnown RBP14.84□□□□□ -0.03
VTN-203ENST00000542029 UBN2Q6ZU65 1347 aa14.84□□□□□ -0.03
VTN-203ENST00000542029 IQCA1LA6NCM1 817 aa14.83□□□□□ -0.04
VTN-203ENST00000542029 NTSR2O95665 410 aa14.83□□□□□ -0.04
VTN-203ENST00000542029 PROSER3Q2NL68 480 aa14.83□□□□□ -0.04
VTN-203ENST00000542029 SLC10A5Q5PT55 438 aa14.83□□□□□ -0.04
VTN-203ENST00000542029 PSMD1Q99460 953 aa14.83□□□□□ -0.04
VTN-203ENST00000542029 CHMP4AQ9BY43 222 aa14.83□□□□□ -0.04
VTN-203ENST00000542029 TMX4Q9H1E5 349 aaPredicted RBP14.83□□□□□ -0.04
VTN-203ENST00000542029 ABCC12Q96J65 1359 aa14.83□□□□□ -0.04
VTN-203ENST00000542029 KDM3BQ7LBC6 1761 aa14.83□□□□□ -0.04
VTN-203ENST00000542029 HDGFL1Q5TGJ6 251 aa14.82□□□□□ -0.04
VTN-203ENST00000542029 XAGE3Q8WTP9 111 aa14.82□□□□□ -0.04
VTN-203ENST00000542029 DBF4Q9UBU7 674 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms