RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 H0YIN7 160 aa18.55■□□□□ 0.56
SUDS3-203ENST00000541591 RALBP1Q15311 655 aa18.55■□□□□ 0.56
SUDS3-203ENST00000541591 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
SUDS3-203ENST00000541591 SETDB2Q96T68 719 aa18.55■□□□□ 0.56
SUDS3-203ENST00000541591 WDR90Q96KV7 1748 aa18.54■□□□□ 0.56
SUDS3-203ENST00000541591 TTLL6Q8N841 843 aa18.54■□□□□ 0.56
SUDS3-203ENST00000541591 TAF1P21675 1872 aa18.54■□□□□ 0.56
SUDS3-203ENST00000541591 MYBBP1AQ9BQG0 1328 aaKnown RBP18.53■□□□□ 0.56
SUDS3-203ENST00000541591 MYL6BP14649 208 aa18.53■□□□□ 0.56
SUDS3-203ENST00000541591 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
SUDS3-203ENST00000541591 HLFQ16534 295 aa18.53■□□□□ 0.56
SUDS3-203ENST00000541591 CEP350Q5VT06 3117 aa18.53■□□□□ 0.56
SUDS3-203ENST00000541591 RIPK4P57078 832 aa18.52■□□□□ 0.56
SUDS3-203ENST00000541591 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.56
SUDS3-203ENST00000541591 C21orf2O43822 256 aa18.51■□□□□ 0.55
SUDS3-203ENST00000541591 ST5P78524 1137 aa18.51■□□□□ 0.55
SUDS3-203ENST00000541591 NBPF5PQ86XG9 351 aaPredicted RBP18.51■□□□□ 0.55
SUDS3-203ENST00000541591 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
SUDS3-203ENST00000541591 NFKBIEO00221 500 aa18.5■□□□□ 0.55
SUDS3-203ENST00000541591 PDE6BP35913 854 aa18.5■□□□□ 0.55
SUDS3-203ENST00000541591 TTLL7Q6ZT98 887 aa18.5■□□□□ 0.55
SUDS3-203ENST00000541591 BRIP1Q9BX63 1249 aa18.5■□□□□ 0.55
SUDS3-203ENST00000541591 TSPYL4Q9UJ04 414 aa18.5■□□□□ 0.55
SUDS3-203ENST00000541591 ANXA1P04083 346 aa18.49■□□□□ 0.55
SUDS3-203ENST00000541591 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
SUDS3-203ENST00000541591 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
SUDS3-203ENST00000541591 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
SUDS3-203ENST00000541591 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
SUDS3-203ENST00000541591 ZBTB3Q9H5J0 574 aa18.48■□□□□ 0.55
SUDS3-203ENST00000541591 RRAGCQ9HB90 399 aa18.48■□□□□ 0.55
SUDS3-203ENST00000541591 ZNF652Q9Y2D9 606 aa18.48■□□□□ 0.55
SUDS3-203ENST00000541591 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
SUDS3-203ENST00000541591 EIF2S2P20042 333 aaKnown RBP18.47■□□□□ 0.55
SUDS3-203ENST00000541591 GPTP24298 496 aa18.47■□□□□ 0.55
SUDS3-203ENST00000541591 LAS1LQ9Y4W2 734 aaKnown RBP18.47■□□□□ 0.55
SUDS3-203ENST00000541591 HSPA6P17066 643 aa18.46■□□□□ 0.55
SUDS3-203ENST00000541591 WDR43Q15061 677 aaKnown RBP eCLIP18.46■□□□□ 0.55
SUDS3-203ENST00000541591 KRT24Q2M2I5 525 aa18.46■□□□□ 0.55
SUDS3-203ENST00000541591 PRPF40BQ6NWY9 871 aaKnown RBP18.46■□□□□ 0.55
SUDS3-203ENST00000541591 OLFM4Q6UX06 510 aa18.46■□□□□ 0.55
SUDS3-203ENST00000541591 NUTM1Q86Y26 1132 aa18.46■□□□□ 0.55
SUDS3-203ENST00000541591 SRGNP10124 158 aa18.45■□□□□ 0.54
SUDS3-203ENST00000541591 LMNB1P20700 586 aa18.45■□□□□ 0.54
SUDS3-203ENST00000541591 PROSER3Q2NL68 480 aa18.45■□□□□ 0.54
SUDS3-203ENST00000541591 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
SUDS3-203ENST00000541591 KIF6Q6ZMV9 814 aa18.44■□□□□ 0.54
SUDS3-203ENST00000541591 SLC51AQ86UW1 340 aa18.44■□□□□ 0.54
SUDS3-203ENST00000541591 ZNF428Q96B54 188 aa18.44■□□□□ 0.54
SUDS3-203ENST00000541591 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
SUDS3-203ENST00000541591 MAP3K15Q6ZN16 1313 aa18.44■□□□□ 0.54
SUDS3-203ENST00000541591 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
SUDS3-203ENST00000541591 STYK1Q6J9G0 422 aa18.43■□□□□ 0.54
SUDS3-203ENST00000541591 MASTLQ96GX5 879 aa18.43■□□□□ 0.54
SUDS3-203ENST00000541591 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
SUDS3-203ENST00000541591 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
SUDS3-203ENST00000541591 TOMM70O94826 608 aa18.42■□□□□ 0.54
SUDS3-203ENST00000541591 HTRA3P83110 453 aa18.42■□□□□ 0.54
SUDS3-203ENST00000541591 ERFEQ4G0M1 354 aa18.42■□□□□ 0.54
SUDS3-203ENST00000541591 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
SUDS3-203ENST00000541591 PRKRIP1Q9H875 184 aaPredicted RBP18.42■□□□□ 0.54
SUDS3-203ENST00000541591 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
SUDS3-203ENST00000541591 GTF2E1P29083 439 aaPredicted RBP18.41■□□□□ 0.54
SUDS3-203ENST00000541591 CNKSR1Q969H4 720 aa18.41■□□□□ 0.54
SUDS3-203ENST00000541591 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
SUDS3-203ENST00000541591 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
SUDS3-203ENST00000541591 TAOK3Q9H2K8 898 aa18.4■□□□□ 0.54
SUDS3-203ENST00000541591 PDZRN3Q9UPQ7 1066 aa18.4■□□□□ 0.54
SUDS3-203ENST00000541591 LMOD3Q0VAK6 560 aa18.39■□□□□ 0.53
SUDS3-203ENST00000541591 AIMP1Q12904 312 aaKnown RBP18.39■□□□□ 0.53
SUDS3-203ENST00000541591 PDIA6Q15084 440 aa18.39■□□□□ 0.53
SUDS3-203ENST00000541591 SCN4AP35499 1836 aa18.38■□□□□ 0.53
SUDS3-203ENST00000541591 NPR1P16066 1061 aa18.38■□□□□ 0.53
SUDS3-203ENST00000541591 SUSD4Q5VX71 490 aa18.38■□□□□ 0.53
SUDS3-203ENST00000541591 C3orf67Q6ZVT6 689 aa18.38■□□□□ 0.53
SUDS3-203ENST00000541591 LRP10Q7Z4F1 713 aa18.38■□□□□ 0.53
SUDS3-203ENST00000541591 GLTPD2A6NH11 291 aa18.37■□□□□ 0.53
SUDS3-203ENST00000541591 ERVV-1B6SEH8 477 aa18.37■□□□□ 0.53
SUDS3-203ENST00000541591 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
SUDS3-203ENST00000541591 CCDC184Q52MB2 194 aa18.37■□□□□ 0.53
SUDS3-203ENST00000541591 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
SUDS3-203ENST00000541591 COL4A5P29400 1685 aa18.36■□□□□ 0.53
SUDS3-203ENST00000541591 RBM46Q8TBY0 533 aaKnown RBP18.36■□□□□ 0.53
SUDS3-203ENST00000541591 NTSR2O95665 410 aa18.35■□□□□ 0.53
SUDS3-203ENST00000541591 CCDC93Q567U6 631 aa18.35■□□□□ 0.53
SUDS3-203ENST00000541591 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
SUDS3-203ENST00000541591 XAGE3Q8WTP9 111 aa18.35■□□□□ 0.53
SUDS3-203ENST00000541591 C7orf43Q8WVR3 580 aa18.35■□□□□ 0.53
SUDS3-203ENST00000541591 NYXQ9GZU5 481 aa18.35■□□□□ 0.53
SUDS3-203ENST00000541591 ZNF277Q9NRM2 450 aaPredicted RBP18.35■□□□□ 0.53
SUDS3-203ENST00000541591 ERBB4Q15303 1308 aa18.34■□□□□ 0.53
SUDS3-203ENST00000541591 ZC3H4Q9UPT8 1303 aaKnown RBP18.34■□□□□ 0.53
SUDS3-203ENST00000541591 KLRG2A4D1S0 409 aaPredicted RBP18.34■□□□□ 0.53
SUDS3-203ENST00000541591 POTECB2RU33 542 aa18.34■□□□□ 0.53
SUDS3-203ENST00000541591 GIGYF2Q6Y7W6 1299 aaKnown RBP18.34■□□□□ 0.53
SUDS3-203ENST00000541591 COPS6Q7L5N1 327 aa18.34■□□□□ 0.53
SUDS3-203ENST00000541591 CHPF2Q9P2E5 772 aa18.34■□□□□ 0.53
SUDS3-203ENST00000541591 LTBP3Q9NS15 1303 aa18.33■□□□□ 0.53
SUDS3-203ENST00000541591 CHL1O00533 1208 aa18.33■□□□□ 0.52
SUDS3-203ENST00000541591 APAF1O14727 1248 aa18.33■□□□□ 0.52
SUDS3-203ENST00000541591 RGL2O15211 777 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms