RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 PIGBQ92521 554 aa10.69□□□□□ -0.7
LMO3-226ENST00000541589 RTL1A6NKG5 1358 aa10.69□□□□□ -0.7
LMO3-226ENST00000541589 COL3A1P02461 1466 aaPredicted RBP10.69□□□□□ -0.7
LMO3-226ENST00000541589 N4BP2Q86UW6 1770 aaPredicted RBP10.69□□□□□ -0.7
LMO3-226ENST00000541589 KDM2BQ8NHM5 1336 aa10.69□□□□□ -0.7
LMO3-226ENST00000541589 LOC102724428A0A0B4J2F2 783 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 FCHSD2O94868 740 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 TATP17735 454 aaPredicted RBP10.68□□□□□ -0.7
LMO3-226ENST00000541589 SIK1P57059 783 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 RRAGCQ9HB90 399 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 SALL2Q9Y467 1007 aaPredicted RBP10.68□□□□□ -0.7
LMO3-226ENST00000541589 ZNF521Q96K83 1311 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 ITPK1Q13572 414 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
LMO3-226ENST00000541589 COG3Q96JB2 828 aa10.68□□□□□ -0.7
LMO3-226ENST00000541589 BRCA1P38398 1863 aaKnown RBP10.67□□□□□ -0.7
LMO3-226ENST00000541589 RNF123Q5XPI4 1314 aa10.67□□□□□ -0.7
LMO3-226ENST00000541589 GNPATO15228 680 aa10.67□□□□□ -0.7
LMO3-226ENST00000541589 CCDC146Q8IYE0 955 aa10.67□□□□□ -0.7
LMO3-226ENST00000541589 NLGN1Q8N2Q7 840 aa10.67□□□□□ -0.7
LMO3-226ENST00000541589 DCAF5Q96JK2 942 aa10.67□□□□□ -0.7
LMO3-226ENST00000541589 ITGB4P16144 1822 aa10.66□□□□□ -0.7
LMO3-226ENST00000541589 PKD1L3Q7Z443 1732 aa10.66□□□□□ -0.7
LMO3-226ENST00000541589 APAF1O14727 1248 aa10.66□□□□□ -0.7
LMO3-226ENST00000541589 RUNDC1Q96C34 613 aa10.66□□□□□ -0.7
LMO3-226ENST00000541589 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
LMO3-226ENST00000541589 ARFGEF1Q9Y6D6 1849 aa10.65□□□□□ -0.7
LMO3-226ENST00000541589 TNRC6CQ9HCJ0 1690 aaKnown RBP10.65□□□□□ -0.7
LMO3-226ENST00000541589 RRS1Q15050 365 aaKnown RBP10.65□□□□□ -0.7
LMO3-226ENST00000541589 CDCA7LQ96GN5 454 aa10.65□□□□□ -0.7
LMO3-226ENST00000541589 RNF181Q9P0P0 153 aa10.65□□□□□ -0.7
LMO3-226ENST00000541589 GYS1P13807 737 aa10.64□□□□□ -0.71
LMO3-226ENST00000541589 PIM2Q9P1W9 311 aa10.64□□□□□ -0.71
LMO3-226ENST00000541589 POLKQ9UBT6 870 aa10.64□□□□□ -0.71
LMO3-226ENST00000541589 ASAP1Q9ULH1 1129 aa10.64□□□□□ -0.71
LMO3-226ENST00000541589 C4AP0C0L4 1744 aa10.64□□□□□ -0.71
LMO3-226ENST00000541589 DIAPH1O60610 1272 aaKnown RBP10.63□□□□□ -0.71
LMO3-226ENST00000541589 U2AF1L5P0DN76 240 aaPredicted RBP10.63□□□□□ -0.71
LMO3-226ENST00000541589 ATP6V1AP38606 617 aa10.63□□□□□ -0.71
LMO3-226ENST00000541589 U2AF1Q01081 240 aaKnown RBP eCLIP10.63□□□□□ -0.71
LMO3-226ENST00000541589 TRAPPC3LQ5T215 181 aa10.63□□□□□ -0.71
LMO3-226ENST00000541589 ZC3H4Q9UPT8 1303 aaKnown RBP10.63□□□□□ -0.71
LMO3-226ENST00000541589 NCAPD2Q15021 1401 aa10.63□□□□□ -0.71
LMO3-226ENST00000541589 HSP90AB2PQ58FF8 381 aa10.62□□□□□ -0.71
LMO3-226ENST00000541589 TMEM92Q6UXU6 159 aa10.62□□□□□ -0.71
LMO3-226ENST00000541589 ARHGEF1Q92888 912 aaKnown RBP10.62□□□□□ -0.71
LMO3-226ENST00000541589 PNNQ9H307 717 aaKnown RBP10.62□□□□□ -0.71
LMO3-226ENST00000541589 RCAN3Q9UKA8 241 aa10.62□□□□□ -0.71
LMO3-226ENST00000541589 RTCBQ9Y3I0 505 aaKnown RBP10.62□□□□□ -0.71
LMO3-226ENST00000541589 KDRP35968 1356 aa10.62□□□□□ -0.71
LMO3-226ENST00000541589 KDM6AO15550 1401 aaPredicted RBP10.62□□□□□ -0.71
LMO3-226ENST00000541589 SNPHO15079 494 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 SLFN5Q08AF3 891 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 DALRD3Q5D0E6 543 aaKnown RBP10.61□□□□□ -0.71
LMO3-226ENST00000541589 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 PARP3Q9Y6F1 533 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 E9PSI1 815 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
LMO3-226ENST00000541589 VEGFAP15692 232 aaPredicted RBP10.61□□□□□ -0.71
LMO3-226ENST00000541589 IRX6P78412 446 aaPredicted RBP10.61□□□□□ -0.71
LMO3-226ENST00000541589 CCDC27Q2M243 656 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 RC3H1Q5TC82 1133 aaKnown RBP10.61□□□□□ -0.71
LMO3-226ENST00000541589 DUSP27Q5VZP5 1158 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
LMO3-226ENST00000541589 TMOD3Q9NYL9 352 aa10.61□□□□□ -0.71
LMO3-226ENST00000541589 KIF24Q5T7B8 1368 aa10.6□□□□□ -0.71
LMO3-226ENST00000541589 SBF1O95248 1867 aa10.6□□□□□ -0.71
LMO3-226ENST00000541589 GLTPD2A6NH11 291 aa10.6□□□□□ -0.71
LMO3-226ENST00000541589 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
LMO3-226ENST00000541589 PLEKHF1Q96S99 279 aa10.6□□□□□ -0.71
LMO3-226ENST00000541589 EMILIN1Q9Y6C2 1016 aa10.6□□□□□ -0.71
LMO3-226ENST00000541589 FLT4P35916 1363 aa10.6□□□□□ -0.71
LMO3-226ENST00000541589 POTECB2RU33 542 aa10.59□□□□□ -0.71
LMO3-226ENST00000541589 RPS6KA4O75676 772 aa10.59□□□□□ -0.71
LMO3-226ENST00000541589 RRP1P56182 461 aaKnown RBP10.59□□□□□ -0.71
LMO3-226ENST00000541589 PRDM10Q9NQV6 1147 aa10.59□□□□□ -0.71
LMO3-226ENST00000541589 PPP4R2Q9NY27 417 aa10.59□□□□□ -0.71
LMO3-226ENST00000541589 SPG7Q9UQ90 795 aa10.59□□□□□ -0.71
LMO3-226ENST00000541589 CNTNAP4Q9C0A0 1308 aa10.59□□□□□ -0.71
LMO3-226ENST00000541589 ZNF831Q5JPB2 1677 aa10.59□□□□□ -0.71
LMO3-226ENST00000541589 FOXN1O15353 648 aa10.58□□□□□ -0.72
LMO3-226ENST00000541589 PPM1GO15355 546 aaPredicted RBP10.58□□□□□ -0.72
LMO3-226ENST00000541589 PPP1R37O75864 691 aa10.58□□□□□ -0.72
LMO3-226ENST00000541589 IL13P35225 146 aa10.58□□□□□ -0.72
LMO3-226ENST00000541589 RFC4P35249 363 aa10.58□□□□□ -0.72
LMO3-226ENST00000541589 WDR63Q8IWG1 891 aa10.58□□□□□ -0.72
LMO3-226ENST00000541589 MAPK8IP3Q9UPT6 1336 aa10.58□□□□□ -0.72
LMO3-226ENST00000541589 PHKG2P15735 406 aa10.57□□□□□ -0.72
LMO3-226ENST00000541589 CHRNA5P30532 468 aa10.57□□□□□ -0.72
LMO3-226ENST00000541589 RASSF7Q02833 373 aa10.57□□□□□ -0.72
LMO3-226ENST00000541589 DDR1Q08345 913 aa10.57□□□□□ -0.72
LMO3-226ENST00000541589 LMNB1P20700 586 aa10.56□□□□□ -0.72
LMO3-226ENST00000541589 RRP7AQ9Y3A4 280 aaKnown RBP10.56□□□□□ -0.72
LMO3-226ENST00000541589 COL5A3P25940 1745 aaPredicted RBP10.55□□□□□ -0.72
LMO3-226ENST00000541589 NEFMP07197 916 aa10.55□□□□□ -0.72
LMO3-226ENST00000541589 HOXB3P14651 431 aaPredicted RBP10.55□□□□□ -0.72
LMO3-226ENST00000541589 TMPOP42166 694 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms