RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 AXIN2Q9Y2T1 843 aa11.62□□□□□ -0.55
CNOT4-212ENST00000541284 DOT1LQ8TEK3 1739 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 ERBB3P21860 1342 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 LRP10Q7Z4F1 713 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 NUTM1Q86Y26 1132 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 ANO2Q9NQ90 1003 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 RAD50Q92878 1312 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 NAP1L5Q96NT1 182 aaPredicted RBP11.61□□□□□ -0.55
CNOT4-212ENST00000541284 UPF3BQ9BZI7 483 aaKnown RBP11.61□□□□□ -0.55
CNOT4-212ENST00000541284 LRP5O75197 1615 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 SGSM2O43147 1006 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 HDGFL1Q5TGJ6 251 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 KCNH5Q8NCM2 988 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 RHPN1Q8TCX5 695 aa11.61□□□□□ -0.55
CNOT4-212ENST00000541284 UBTFL1P0CB47 393 aaPredicted RBP11.6□□□□□ -0.55
CNOT4-212ENST00000541284 HS1BP3Q53T59 392 aa11.6□□□□□ -0.55
CNOT4-212ENST00000541284 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
CNOT4-212ENST00000541284 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
CNOT4-212ENST00000541284 UBE2Q2Q8WVN8 375 aa11.6□□□□□ -0.55
CNOT4-212ENST00000541284 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
CNOT4-212ENST00000541284 TRIM44Q96DX7 344 aaPredicted RBP11.6□□□□□ -0.55
CNOT4-212ENST00000541284 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
CNOT4-212ENST00000541284 SYCE3A1L190 88 aa11.59□□□□□ -0.55
CNOT4-212ENST00000541284 RAB11FIP3O75154 756 aa11.59□□□□□ -0.55
CNOT4-212ENST00000541284 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
CNOT4-212ENST00000541284 TRIM6-TRIM34B2RNG4 842 aa11.59□□□□□ -0.55
CNOT4-212ENST00000541284 CHPF2Q9P2E5 772 aa11.59□□□□□ -0.55
CNOT4-212ENST00000541284 GADD45BO75293 160 aaPredicted RBP11.59□□□□□ -0.55
CNOT4-212ENST00000541284 HOXB7P09629 217 aa11.59□□□□□ -0.55
CNOT4-212ENST00000541284 NOL7Q9UMY1 257 aaKnown RBP11.59□□□□□ -0.55
CNOT4-212ENST00000541284 MYH3P11055 1940 aa11.59□□□□□ -0.55
CNOT4-212ENST00000541284 COL15A1P39059 1388 aa11.58□□□□□ -0.55
CNOT4-212ENST00000541284 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.56
CNOT4-212ENST00000541284 NCLP19338 710 aaKnown RBP11.58□□□□□ -0.56
CNOT4-212ENST00000541284 MTX1Q13505 466 aa11.58□□□□□ -0.56
CNOT4-212ENST00000541284 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.56
CNOT4-212ENST00000541284 OFD1O75665 1012 aa11.58□□□□□ -0.56
CNOT4-212ENST00000541284 ABTB2Q8N961 1025 aa11.58□□□□□ -0.56
CNOT4-212ENST00000541284 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
CNOT4-212ENST00000541284 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.58□□□□□ -0.56
CNOT4-212ENST00000541284 GCP02774 474 aa11.58□□□□□ -0.56
CNOT4-212ENST00000541284 RUFY3Q7L099 469 aa11.58□□□□□ -0.56
CNOT4-212ENST00000541284 ZNF500O60304 480 aaPredicted RBP11.57□□□□□ -0.56
CNOT4-212ENST00000541284 ST3GAL1Q11201 340 aa11.57□□□□□ -0.56
CNOT4-212ENST00000541284 KCNB2Q92953 911 aa11.57□□□□□ -0.56
CNOT4-212ENST00000541284 NOL8Q76FK4 1167 aaKnown RBP11.57□□□□□ -0.56
CNOT4-212ENST00000541284 SURF6O75683 361 aaKnown RBP11.57□□□□□ -0.56
CNOT4-212ENST00000541284 MCCP23508 829 aa11.57□□□□□ -0.56
CNOT4-212ENST00000541284 THSD7AQ9UPZ6 1657 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 PI4KAP2A4QPH2 592 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 LARGE1O95461 756 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 MBD3O95983 291 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 ANXA1P04083 346 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 COL9A3Q14050 684 aaPredicted RBP11.56□□□□□ -0.56
CNOT4-212ENST00000541284 PI4KAP1Q8N8J0 262 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 DNAAF4Q8WXU2 420 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 SRGAP3O43295 1099 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 KIF1BPQ96EK5 621 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 KAZALD1Q96I82 304 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 GDPD2Q9HCC8 539 aa11.56□□□□□ -0.56
CNOT4-212ENST00000541284 SPEF2Q9C093 1822 aa11.55□□□□□ -0.56
CNOT4-212ENST00000541284 AK2P54819 239 aa11.55□□□□□ -0.56
CNOT4-212ENST00000541284 PROSER3Q2NL68 480 aa11.55□□□□□ -0.56
CNOT4-212ENST00000541284 USP48Q86UV5 1035 aa11.55□□□□□ -0.56
CNOT4-212ENST00000541284 UTYO14607 1347 aa11.55□□□□□ -0.56
CNOT4-212ENST00000541284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.565e-9■■■■■ 32.1
CNOT4-212ENST00000541284 NUP98P52948 1817 aa11.54□□□□□ -0.56
CNOT4-212ENST00000541284 SBF2Q86WG5 1849 aa11.54□□□□□ -0.56
CNOT4-212ENST00000541284 PTH1RQ03431 593 aa11.54□□□□□ -0.56
CNOT4-212ENST00000541284 LRRC59Q96AG4 307 aaKnown RBP11.54□□□□□ -0.56
CNOT4-212ENST00000541284 CPA1P15085 419 aa11.54□□□□□ -0.56
CNOT4-212ENST00000541284 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
CNOT4-212ENST00000541284 ZKSCAN5Q9Y2L8 839 aa11.54□□□□□ -0.56
CNOT4-212ENST00000541284 TTC41PQ6P2S7 1318 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 PRAMEF22A3QJZ6 481 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 LY75O60449 1722 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 ADCK5Q3MIX3 580 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 AKAP4Q5JQC9 854 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 KIAA1211Q6ZU35 1233 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 COL24A1Q17RW2 1714 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 WDR33Q9C0J8 1336 aaKnown RBP11.53□□□□□ -0.56
CNOT4-212ENST00000541284 BRINP3Q76B58 766 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 SNRKQ9NRH2 765 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 SPG7Q9UQ90 795 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 LAMA4Q16363 1823 aa11.53□□□□□ -0.56
CNOT4-212ENST00000541284 DOCK2Q92608 1830 aa11.52□□□□□ -0.56
CNOT4-212ENST00000541284 PDIA6Q15084 440 aa11.52□□□□□ -0.56
CNOT4-212ENST00000541284 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.56
CNOT4-212ENST00000541284 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.56
CNOT4-212ENST00000541284 JCADQ9P266 1359 aa11.52□□□□□ -0.56
CNOT4-212ENST00000541284 TAF1LQ8IZX4 1826 aa11.52□□□□□ -0.57
CNOT4-212ENST00000541284 TPM2P07951 284 aa11.52□□□□□ -0.57
CNOT4-212ENST00000541284 FUCA2Q9BTY2 467 aa11.52□□□□□ -0.57
CNOT4-212ENST00000541284 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
CNOT4-212ENST00000541284 SLIT2O94813 1529 aa11.52□□□□□ -0.57
CNOT4-212ENST00000541284 RNMTO43148 476 aaKnown RBP11.52□□□□□ -0.57
CNOT4-212ENST00000541284 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-212ENST00000541284 TERF1P54274 439 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms